G71921


Basic Information

Item Value
gene id G71921
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 11706557 ~ 11772009 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU96106
aagagagagagagagagagagagagagagagaggaagagagagagagagagagagagagagtgcagcCAGAGTTCAGGATGTCAGGCTTCCAGAGAGTTTAGATGGAGACGTTTTGAAGCCTATTGAATCGTAGAGCCGCCACAGCCTTAACACaggtgtattgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagagtatgcATTTATGTGTGTACGTGCATTCTTTTCAAACCTCTCCATACTGTATAAGTACTCCAGCCTCCCTCTATGCTTTGTATACTAGCCTACCTCCTTCGCGATTAAAAGCCtgttttaaaggtgcagtaagtgatTCTGCCCCCGTTCTTTGCTCGGAGGAGATGGAAAAAGAAGAACAGCAAGGCAGTTAAAAGTGGCGCAGACGTACAGAGCAAGAGTGGAACCGTGGAGACATTTTTGTATGCATATTGAGTCAAAATTCAAACCTGTTAAAAGATGACAGAGCATACAGAGTACTGTACTTGCCATCTATTTTGAGATCTCCGTAGATTTTCCATGATGATGAAATGGTCGCTATACCAGTGGGTTGTTGGgtcatgcatacatacattgtGTGCTTGAATATGCCTAataattcacaaatgtgtataCTGAAGGTGTGGGTAGTGAAAATACTTGAAAACGGATACTCTAGCCTTCGAGGTAGTGTAGTACTAATACCAATGTTGTACAGAATTCCCTTTAAGACTAACTCCTCAGTTATGAATTTGTACTCCGAAGTGTGACTTAGAAAAACTATGAAGCAGGAGTGAGTGTATGTAATATAAAGTGTATATCTGTAATCCACTCTTACCAAACCCTTATATACAGCGGTAGAAACCAAATGGCATTGCTAGTGCTCTTAGACTAGGTTACTGCTTTAACCGTTCTCATTTTGTCCCATTCTAGCTAAGGTTTCTTTGAGAATGTCTTTTCATGGTGCCAGCTAACACATGTTAATGTCATTTCTGGTTTAGAGGCTTTTTGTGTGGGTGATTCCATAGGTTAATGGCAAAAGATTTGTTCTGTGACGGCCGTGTGGCACAGCTTTTTAGCTTCGTTTCCCCATTGAAAGTTTGATACTGCTAGGCACAGCactgcttattttttttcttttcataaagATGTAAGAGTATGTTTTTAGTCGTTCTCTTCGCTAAACTGTAGGATTTGTTCAGTAGCTAGTCATGGCTGCCCTCCCAGAGGGGCTGGCAGgtgttgttctttttctctttggtTGGGTTATTATCATGTTTCTTAAGTTGTATTTTTTGTGTccgtattgcttttttttttctttttttttttatgaatttcatGATTAATTTACCTTAGAAGACATTATTATTCCAAATGTATTTGGTTGATATCTGTATTTATTATCACTTCAAAAAGGATTAGAGGACAGAGGCAGACAGGAgcgtttgttttaatttgattttttcggggttgtttttgtttttaatactgtGTAGTTTTCATGCCAGATGTGAAAGCTCTACCTCGTCTGAGCCATTCTCAGTTCTGTTACACTTTTGTACATCATTTCAAAAAGATGTAATGTCATGTCCACaataaaagacacacaaaatggCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96106 True 1627 lncRNA 0.39 2 11706557 11772009

Neighbor

gene id symbol gene type direction distance location
LOC120562012 LOC103388795,LOC103359769 coding upstream 90498 11599114 ~ 11616059 (+)
LOC120561921 LOC104943362,LOC103369138 coding upstream 689975 11010980 ~ 11016582 (+)
macf1b LOC102795676,LOC102290681,LOC101484559,LOC100704065,LOC104943360 coding upstream 704087 10961890 ~ 11002470 (+)
rspo2 rspo2 coding upstream 977436 10662478 ~ 10729121 (+)
eif3ea eif3e,LOC101480544,LOC102302331,LOC100691937 coding upstream 1049761 10621192 ~ 10656796 (+)
LOC120562168 zadh2,LOC102799231 coding downstream 198868 11970877 ~ 11975946 (+)
LOC120561949 zhx2,LOC104959811 coding downstream 655532 12427541 ~ 12455916 (+)
tbc1d31 tbc1d31 coding downstream 693940 12465949 ~ 12476564 (+)
LOC120561925 NA coding downstream 706889 12478898 ~ 12484912 (+)
mrpl32 NA coding downstream 772487 12544496 ~ 12546473 (+)
G71882 NA non-coding upstream 222914 11483406 ~ 11483643 (+)
G71873 NA non-coding upstream 269858 11436471 ~ 11436699 (+)
LOC120562313 NA non-coding upstream 396705 11236294 ~ 11309852 (+)
G71838 NA non-coding upstream 519199 11187122 ~ 11187358 (+)
G71835 NA non-coding upstream 543512 11162696 ~ 11163045 (+)
G71929 NA non-coding downstream 49631 11821640 ~ 11821934 (+)
G71952 NA non-coding downstream 440001 12212010 ~ 12215147 (+)
G71953 NA non-coding downstream 444254 12216263 ~ 12216560 (+)
G71959 NA non-coding downstream 501385 12273394 ~ 12275941 (+)
G71961 NA non-coding downstream 558059 12330068 ~ 12330962 (+)
G71896 LOC103388795 other upstream 90315 11599037 ~ 11616242 (+)
mbpb mbp,LOC104918400 other upstream 107331 11537184 ~ 11599226 (+)
depdc1b depdc1b,LOC103388656,LOC101486657 other upstream 224134 11467345 ~ 11482423 (+)
LOC120562569 LOC104943359,LOC103359623,LOC101482188,LOC107100615,LOC106961743 other upstream 745427 10785654 ~ 10961130 (+)
G71743 NA other upstream 885057 10820295 ~ 10821500 (+)
LOC120563165 scx other downstream 939593 12711602 ~ 12729226 (+)
LOC120562335 NA other downstream 988808 12760817 ~ 12773439 (+)
G72204 ctnnb1,LOC103388302 other downstream 1352925 13124934 ~ 13125897 (+)
hint3 hint3 other downstream 1473659 13245668 ~ 13250110 (+)
prelid3a prelid3a other downstream 1696202 13468211 ~ 13471516 (+)

Expression


Co-expression Network