LOC120561922


Basic Information

Item Value
gene id LOC120561922
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 11708381 ~ 11710258 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU96107
AAGTTGATCACAAACATCCAAGATGCCGTCTGCAAGTGTGCGCATGTCGATTGCATTGGTTATAGTGATTCTTTTGCGATTGTCTGCAACAAATAGAAGAAATCATGCGAGGAGAAGAAGACGTCTACAACGCCTACGAATGCTGGTGGATCAGTTTATGACTGGTGAGCCAACAACATACTGTGCCATACACCACAACATGCCTATACTGCGCCTGTGGTTCGATGTGGAGACTGAGCTGAGGCAGGATTTCCGCCTCACCAGAAGAGCGATGCACAGCTTACAGAGGCTTTTGCACAGGGAGCAGGACCATGGCTGGGGTAATGAGCTTGAGGTACTCATATACACCTATTGGCTGGCACATGGACTCTCTTATCGGGTGGTGGCCCGTGTCTTTAATGTGCCAAAGGCCACAGTTCATGACATCATCCACAGAGTGGCCCAGAACATATGGGACAATCTGAGGAGAGCAATCGACTTCCCTCAAACAGTGGAC
>XM_039805264.1
TCGGACACTACTTGGTTACGGTTACGTCATCAAGCATTGTCGCTAGCTGGCTGTTACGTCACCAGAGGCGACAAGTTGATCACAAACATCCAAGATGCCGTCTGCAAGTGTGCGCATGTCGATTGCATTGGTTATAGTGATTCTTTTGCGATTGTCTGCAACAAATAGAAGAAATCATGCGAGGAGAAGAAGACGTCTACAACGCCTACGAATGCTGGTGGATCAGTTTATGACTGGTGAGCCAACAACATACTGTGCCATACACCACAACATGCCTATACTGCGCCTGTGGTTCGATGTGGAGACTGAGCTGAGGCAGGATTTCCGCCTCACCAGAAGAGCGATGCACAGCTTACAGAGGCTTTTGCACAGGGAGCAGGACCATGGCTGGGGTAATGAGCTTGAGGTACTCATATACACCTATTGGCTGGCACATGGACTCTCTTATCGGGTGGTGGCCCGTGTCTTTAATGTGCCAAAGGCCACAGTTCATGACATCATCCACAGAGTGGCCCAGAACATATGGGACAATCTGAGGAGAGCAATCGACTTCCCTCAAACAGTGGACCTGCCTGCAGTGGGTCAGGGTATTGTCAACATTTCTGGAACCCCTGCATTCTACAATGTGGTTGGAGCAATCGATGGCAGCCACATACTTGCTAATCGGAGCCAGCACACGAAAGAGGAAGTCTTGGCCTGGATATCCTCTGGCTACACCGACATATTGGCCATTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96107 False 496 TUCP 0.49 2 11708453 11709509
XM_039805264.1 True 736 mRNA 0.50 3 11708381 11710258

Neighbor

gene id symbol gene type direction distance location
LOC120562012 LOC103388795,LOC103359769 coding upstream 92322 11599114 ~ 11616059 (+)
LOC120561921 LOC104943362,LOC103369138 coding upstream 691799 11010980 ~ 11016582 (+)
macf1b LOC102795676,LOC102290681,LOC101484559,LOC100704065,LOC104943360 coding upstream 705911 10961890 ~ 11002470 (+)
rspo2 rspo2 coding upstream 979260 10662478 ~ 10729121 (+)
eif3ea eif3e,LOC101480544,LOC102302331,LOC100691937 coding upstream 1051585 10621192 ~ 10656796 (+)
LOC120562594 znf516 coding downstream 10858 11721116 ~ 11768925 (+)
LOC120562168 zadh2,LOC102799231 coding downstream 260619 11970877 ~ 11975946 (+)
LOC120561949 zhx2,LOC104959811 coding downstream 717283 12427541 ~ 12455916 (+)
tbc1d31 tbc1d31 coding downstream 755691 12465949 ~ 12476564 (+)
LOC120561925 NA coding downstream 768640 12478898 ~ 12484912 (+)
G71882 NA non-coding upstream 224738 11483406 ~ 11483643 (+)
G71873 NA non-coding upstream 271682 11436471 ~ 11436699 (+)
LOC120562313 NA non-coding upstream 398529 11236294 ~ 11309852 (+)
G71838 NA non-coding upstream 521023 11187122 ~ 11187358 (+)
G71835 NA non-coding upstream 545336 11162696 ~ 11163045 (+)
G71929 NA non-coding downstream 111382 11821640 ~ 11821934 (+)
G71952 NA non-coding downstream 501752 12212010 ~ 12215147 (+)
G71953 NA non-coding downstream 506005 12216263 ~ 12216560 (+)
G71959 NA non-coding downstream 563136 12273394 ~ 12275941 (+)
G71961 NA non-coding downstream 619810 12330068 ~ 12330962 (+)
G71896 LOC103388795 other upstream 92139 11599037 ~ 11616242 (+)
mbpb mbp,LOC104918400 other upstream 109155 11537184 ~ 11599226 (+)
depdc1b depdc1b,LOC103388656,LOC101486657 other upstream 225958 11467345 ~ 11482423 (+)
LOC120562569 LOC104943359,LOC103359623,LOC101482188,LOC107100615,LOC106961743 other upstream 747251 10785654 ~ 10961130 (+)
G71743 NA other upstream 886881 10820295 ~ 10821500 (+)
LOC120563165 scx other downstream 1001344 12711602 ~ 12729226 (+)
LOC120562335 NA other downstream 1050559 12760817 ~ 12773439 (+)
G72204 ctnnb1,LOC103388302 other downstream 1414676 13124934 ~ 13125897 (+)
hint3 hint3 other downstream 1535410 13245668 ~ 13250110 (+)
prelid3a prelid3a other downstream 1757953 13468211 ~ 13471516 (+)

Expression


Co-expression Network