G71952


Basic Information

Item Value
gene id G71952
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 12212010 ~ 12215147 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU96144
GTCGTTTTTATTTGGCACAACACAAAAGTGCTTTACGATAACACTGCCAATGACTAGTTTGGCATGAAAACATCCTCATGGTTCCATTGTTGGTCTCATTAATTAAACCTTGGAATAAAACCTCTCCTTAAAAGTATATAAAAATGATActcagtttttcttttgttattgcTCAGTCAGGCCCCTCACAACGAAAACATATCATTTGCAGCttattacatttttgtgcaAATCGTTTGGATGAAGTTTTCAGTCTGCTTTGGCTTTATTGTCCGTTGTATTAAAATCTGAACATAGGTTAGTGTTTCAACATGGCAAAAAATGTGAAGCCTAGAAATTACGTCCACATgttttatatacatatttattaaaaatgatttctaaacatatttattgtttttgcagTGTGGACATAGAACCTTAGGGGTCTTAAATGTACATGGAGGATATCTTACTTATTACAAAATACTATAAACCACAGAATTATCCTACATAAATATGCTGGTtgtctacttaagtacaaaaacacAGGTTCATCACCTCTCTTCAAATCAATAACTTATAAGTTgcatttttattgttgttattgcAGACAAACCCCCCAGTTCGTAATTTCACATTGTTTGGTCAGATAGTCAATGTCAGAACAGTTGAAAgcacaacaaacacatttttctattTTCCATTTTTCTTATAAAAACATGATGGTAGCTAagcaaaaatagaataaaaaaatgtctataTATAAAATGCATTGAAATACAAAGTAATAAGAAGTAAACGGCTACAGCAAAGGGCCGACAAGGCAGAGAAATCCAGCTTTGACTTAATAAAGAACTGTGTATAAAAAAGGACACTTTTATATTTAATACCACAAACAGATCATACATTACTTGAGACCTTCAGCATGCATCAGTCTTTGGATGGCATCCTAATGCCTTGATGCAATGCAAAGAGAACCACTGAGGTATTTCATTTTGATTACGTCAAGCATCGTGCTGGATGACGGGAGAGACATAAAAGTGCATAAGAATTAAACTCATGTCTGCTCCTGGTCTTTAGCAAACACTGGACTCATTTCATTCCAAAATTCTGTTCCCTTCAATCAAGTTATTCACATTCCTGTTTTCAGGTAGTACTTTTCTCCCATTTGGTGCATTAATGTATTCttcacacattttctttttgcctTGCAGTTCACTCAACACAATGCAAGGAACCAGAGGGTTGTAGCTATCCTCAATACAGTATgtggagaaaggaagagagcaAGGACACATGGAAGGCAAAAATCACATAATCTTTGGATTGGAACATGTCCACCAAAATAAGTGTTAAAACCATTTCGTAACATAAACTtatcatttatataaaaaagaaaagaaaaacaaaagtcattgtttctgtaaaaagaaaacagtcACAGCAGCAATGATACACCATTTCTCTTCTGGTCACATGTTTACCTGGTCACCTGATCAGGTGGAGATTATATCTACCAATCAGTAATCAGTTTGAGATTCTTCACTTTGTAAACATTGAGAAAAATACTGCAATCACGTCATATGGGAATAACAACAAGACATTCGAACATCGTAGATTTTGCAGCCTCTTACTGTAATAGCGTGACTGGATACTTCTATGGATGTTGCAACTTTTCACGTTTAACAGACATGCACCACAGTGACTGATGTATTTTCTTTAAACAGCAAATCAAAAAGTGTAATGTCAAGCACAAACACAACCTGCATCTAATAGCAGTGAATTGAAATGTAGGAGTTGCAATTATGAATTGACtgatacataaaaaaatgtcttctgtaGACACAGATAACTACATTTATAATGTGTGAACTCTATGAGGAAGTTTCTTTCCCATATGACATGAGTGCAACAAAAGAAAGAGAGCAGCTTTTCATTTTAAAGCCCTTTCCGTGCCCTTTCactcttattacattgaaactGTAGCTCTTCTTTTCTTAACAACAGTTCTTAACAACTTGTACTTAGATGACAGAATAGGGCGATGTCTCCTAAAacgacatacagtatatgaccgTTCCATAGGGTTAGAAAAACATCAGGAATTAGCTTAAAATGATTTGCGTGaaaactattactattacttcCGTGACTACATCACGGAAGTTACTAAATTACGGACTTAAGTTTTTAAAGTTCATGacagttgacttttggttttcctgtgttttcattgacccatccaccacaccAAACTGCCTCCTTATGCCGACTTTTACTTTGTCACCTTATTGCCACTAGGGGTCGCCTTCTAAGAACAAACGTAAATATAGGTTGTTATAGGCTGCTAGCGAAACAGACCTATACGGTTGTTTACTGTGTGAGGACGGTCTGTTCTAAAACATTACACCAATGCATTGCCCCCAGAGCTACAGTAAGAACTTTGAAGTTGTGGTATTACATCTTTAAACAGATATAACTTCAGTATAACTTCTTGTTGAAGCCACACAGACCATCCAGCATAGAGATAAGCCCCACCAGATGTAATtagtagcgctccacctcccgcacaagTTCTggctagtgttaatttcgtcagacgagacaagactaaatatgttcgtgtacgacctttttttccatgactaagacgagacgatgacgagactgcgccaatgtccaaaaactctgactaagactaaattaacatgcattattgttgaagaaaaaagacgagactaaaatgttttgcataaaataaaaactaagataaaatccctcttcattttcgtctacaatcgtctctactttttcatcatgagatagaatattcagctgttactgagacccggtgccgacaggtgccctaactaccgttatctaccggaccgaatagcctgcgcttctctccgatgctcctaaacggacgttagagtcaaccgaaacatcgctgcatggggcgctagttaacactacacttggcagcagctaacgttagcctaccgttagccagcagttggatttaaccatggatttaacacagttaaaatgctgacagctagctaaacggtgtaaaggtttgtctctatttccaacacgagacgtacgacagtctgcagctgccgttgtctgaaaaacaacacatgttgcgttcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96144 True 3138 lncRNA 0.37 1 12212010 12215147

Neighbor

gene id symbol gene type direction distance location
LOC120562168 zadh2,LOC102799231 coding upstream 236064 11970877 ~ 11975946 (+)
LOC120562594 znf516 coding upstream 443085 11721116 ~ 11768925 (+)
LOC120562012 LOC103388795,LOC103359769 coding upstream 595951 11599114 ~ 11616059 (+)
LOC120561921 LOC104943362,LOC103369138 coding upstream 1195428 11010980 ~ 11016582 (+)
macf1b LOC102795676,LOC102290681,LOC101484559,LOC100704065,LOC104943360 coding upstream 1209540 10961890 ~ 11002470 (+)
LOC120561949 zhx2,LOC104959811 coding downstream 212394 12427541 ~ 12455916 (+)
tbc1d31 tbc1d31 coding downstream 250802 12465949 ~ 12476564 (+)
LOC120561925 NA coding downstream 263751 12478898 ~ 12484912 (+)
mrpl32 NA coding downstream 329349 12544496 ~ 12546473 (+)
zmp:0000000930 NA coding downstream 332873 12548020 ~ 12549958 (+)
G71929 NA non-coding upstream 390076 11821640 ~ 11821934 (+)
G71921 NA non-coding upstream 440001 11706557 ~ 11772009 (+)
G71882 NA non-coding upstream 728367 11483406 ~ 11483643 (+)
G71873 NA non-coding upstream 775311 11436471 ~ 11436699 (+)
LOC120562313 NA non-coding upstream 902158 11236294 ~ 11309852 (+)
G71953 NA non-coding downstream 1116 12216263 ~ 12216560 (+)
G71959 NA non-coding downstream 58247 12273394 ~ 12275941 (+)
G71961 NA non-coding downstream 114921 12330068 ~ 12330962 (+)
G71969 NA non-coding downstream 137863 12353010 ~ 12353491 (+)
LOC120561687 NA non-coding downstream 155577 12370724 ~ 12371829 (+)
LOC120561922 NA other upstream 501752 11708381 ~ 11710258 (+)
G71896 LOC103388795 other upstream 595768 11599037 ~ 11616242 (+)
mbpb mbp,LOC104918400 other upstream 612784 11537184 ~ 11599226 (+)
depdc1b depdc1b,LOC103388656,LOC101486657 other upstream 729587 11467345 ~ 11482423 (+)
G71743 NA other upstream 1390510 10820295 ~ 10821500 (+)
LOC120563165 scx other downstream 496455 12711602 ~ 12729226 (+)
LOC120562335 NA other downstream 545670 12760817 ~ 12773439 (+)
G72204 ctnnb1,LOC103388302 other downstream 909787 13124934 ~ 13125897 (+)
hint3 hint3 other downstream 1030521 13245668 ~ 13250110 (+)
prelid3a prelid3a other downstream 1253064 13468211 ~ 13471516 (+)

Expression


Co-expression Network