LOC120562711 (eif3h)


Basic Information

Item Value
gene id LOC120562711
gene name eif3h
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 13624448 ~ 13688514 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU96663
CAGAGGCCGATCTAGGAGAACCGCCAGCGACAGAGCAGAGGGGAGCCCCCGCTGCCTGAGGAGGACATCAGCAAAATGTTCAAGCCCCCCCAGCCTCCACCACGCATGGACACGTTGCTTATTGCAgGGCAAATTAACAACTACTGCCAGAACGTGAAGGAATTCACCTCGCAGAACCTTGGGAAGCTGTTCATGGCGGAGGCTCTCCAAGGCCACAACTAGAGGAGAGAAACGGGCCAAAAGAATCTGCGAGAGAGGGAAATAGGGCGCTCAGAAGGGAGATAAAGAAAGGTAACGGATGCAAAACCATCTTGAAGACGACTGGAAGAATACAGCacctttgtttgttttcaaagaatttattcattgtttttatGCCTGGCTCCATCTTGGAtacaaaattatctttaaaggtTACTAGATTTTGATTG
>XM_039806562.1
TCTTTACCGGAAACGTCCGTCAACGAACACTTTCCTCCCTTTTTCCGCGTGCGGCGTTCTGAAGATGGCTTCACGTAAAGAGTCTGGTACAGCAACAAGCGCCGTGATGGCTTCTACAAGCGGCACTTTGGACTCTCCTGTCAAACAGATCCAAATTGAGGGACTGGTGGTGCTAAAGATTATCAAGCACTACCAGGAAGAGGGCCAGGGAAGTGAGGTGGTTCAGGGCGTCCTGCTGGGCCTGGTAGTCGAGGACCGGCTGGAGATCACCAACTGCTTCCCCTTCCCCCAGCACACCGAGGATGATGCAGACTTTGATGAAGTCCAGTACCAGATGGAGATGATGCGTTCTCTGCGTCACGTCAACATTGACCATCTGCATGTGGGCTGGTACCAGTCCACCTACTATGGCTCCTTTGTCAGCCGAGCGCTGCTCGACTCCCAGTTCAGCTACCAGCACGCCATCGAAGAGTCCGTTGTACTCATCTATGACCCTATAAAGACTGCACAAGGCTCCCTGTCCCTGAAGGCCTACAGGCTTACCCCCAAACTCATGGAGATCTGCAAAGAGAAAGATTTCACACCTGAGGCCTTGAAGAAGGCTAACATTGGCTTCGAGCATATGTTCGAGGAGGTGCCTATTATCATCAAAAACTCCCACCTCATCAACGTGCTGATGTGGGATCTGGAGGACAAGTCCACAGTCGCTGACAAACATGAACTGCTCAACCTCTCAAGCAGCAACCATTTGGAGAAGAGCCTTCAGCTTCTGATGGACAGGGTGGATGACATGTCGCAAGACATAGTCAAGTATAACACCTACAGCCGCAATCTGAGTAAGCAACAGCAGCAGAAGCACCAGGTAACTCTCGAGCACActcgcacatacacacaaAGGCCGATCTAGGAGAACCGCCAGCGACAGAGCAGAGGGGAGCCCCCGCTGCCTGAGGAGGACATCAGCAAAATGTTCAAGCCCCCCCAGCCTCCACCACGCATGGACACGTTGCTTATTGCAgGGCAAATTAACAACTACTGCCAGAACGTGAAGGAATTCACCTCGCAGAACCTTGGGAAGCTGTTCATGGCGGAGGCTCTCCAAGGCCACAACTAGAGGAGAGAAACGGGCCAAAAGAATCTGCGAGAGAGGGAAATAGGGCGCTCAGAAGGGAGATAAAGAAAGGTAACGGATGCAAAACCATCTTGAAGACGACTGGAAGAATACAGCacctttgtttgttttcaaagaatttattcattgtttttatGCCTGGCTCCATCTTGGAtacaaaattatctttaaaggtTACTAGATTTTGATTGGAATAAAAAGTCTTGCATCTCTTCATCTT

Function

symbol description
eif3h Enables deubiquitinase activity. Contributes to translation initiation factor activity. Involved in negative regulation of proteasomal ubiquitin-dependent protein catabolic process and translational initiation. Located in extracellular exosome and membrane. Part of eukaryotic translation initiation factor 3 complex. Implicated in breast cancer; prostate cancer; and prostate carcinoma. Biomarker of prostate cancer.

NR:

description
PREDICTED: eukaryotic translation initiation factor 3 subunit H isoform X1

GO:

id name namespace
GO:0001731 formation of translation preinitiation complex biological_process
GO:0005852 eukaryotic translation initiation factor 3 complex cellular_component
GO:0033290 eukaryotic 48S preinitiation complex cellular_component
GO:0016282 eukaryotic 43S preinitiation complex cellular_component
GO:0003743 translation initiation factor activity molecular_function

KEGG:

id description
K03247 EIF3H; translation initiation factor 3 subunit H

RNA

RNA id representative length rna type GC content exon number start site end site
TU96663 False 431 lncRNA 0.48 2 13687589 13688485
XM_039806562.1 True 1352 mRNA 0.50 8 13624448 13688514

Neighbor

gene id symbol gene type direction distance location
LOC120562882 LOC104926221,LOC103388613,LOC103353832 coding upstream 3104 13609618 ~ 13621344 (+)
LOC120561886 LOC103353818,LOC102295432,LOC102785128,LOC101482972 coding upstream 205996 13414324 ~ 13418452 (+)
rspo3 rspo3,LOC103353817 coding upstream 212527 13395438 ~ 13411921 (+)
trmt11 trmt11 coding upstream 360356 13252697 ~ 13264092 (+)
LOC120561555 ncoa7,LOC104938018 coding upstream 381223 13239114 ~ 13243225 (+)
zgc:110410 LOC104941306 coding downstream 370126 14058640 ~ 14068948 (+)
LOC120561614 NA coding downstream 895521 14584035 ~ 14588452 (+)
si:cabz01093077.1 NA coding downstream 901729 14590243 ~ 14593984 (+)
LOC120561707 NA coding downstream 912375 14600889 ~ 14603683 (+)
LOC120561930 NA coding downstream 915438 14603952 ~ 14607904 (+)
G72319 NA non-coding upstream 91446 13532125 ~ 13533002 (+)
G72314 NA non-coding upstream 141337 13475370 ~ 13483111 (+)
G72309 NA non-coding upstream 150978 13471751 ~ 13473470 (+)
LOC120562636 NA non-coding upstream 176209 13445866 ~ 13448239 (+)
G72242 NA non-coding upstream 415414 13208828 ~ 13209034 (+)
LOC120561831 NA non-coding downstream 398089 14086603 ~ 14087796 (+)
G72466 NA non-coding downstream 475022 14163536 ~ 14163744 (+)
G72520 NA non-coding downstream 826153 14514667 ~ 14517897 (+)
G72551 NA non-coding downstream 915470 14603984 ~ 14604638 (+)
G72559 NA non-coding downstream 944566 14633080 ~ 14633375 (+)
LOC120562530 ext1,LOC103135121 other upstream 18203 13559760 ~ 13606245 (+)
prelid3a prelid3a other upstream 152932 13468211 ~ 13471516 (+)
hint3 hint3 other upstream 374338 13245668 ~ 13250110 (+)
G72204 ctnnb1,LOC103388302 other upstream 498551 13124934 ~ 13125897 (+)
LOC120562335 NA other upstream 851009 12760817 ~ 12773439 (+)
LOC120561928 csmd3,LOC101478087,LOC108232275,LOC102799137,LOC102309299,LOC102195523 other downstream 65539 13754053 ~ 14046136 (+)
cmc1 cmc1 other downstream 445070 14133584 ~ 14144296 (+)
LOC120562174 rbms3,LOC101066789,LOC103370884 other downstream 487303 14175817 ~ 14370091 (+)
G72506 NA other downstream 737280 14425794 ~ 14426180 (+)
LOC120561718 LOC107101581 other downstream 937964 14626478 ~ 14632721 (+)

Expression


Co-expression Network