G72520


Basic Information

Item Value
gene id G72520
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 14514667 ~ 14517897 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU96863
GATAAAATAAGTGTGCAACCTTCCCAAAAACAATGTGCACTTAAAAAGCAATAGCTTATAAAATGTTCAAACCATCAGTGAAATAGCTCTCTACCAAAGATTTAAATCAAATCTTTCACGGCGATGATCTTTAGTTTACAAAATATACAATGCTACAACGTGCTGTAGGATATTGCGTGTAGATGAAACCATCTAACAGGAATGACATATTCTATTCtagtcaggaaaaaaaaaaaaaaaacagaaaagctaATTTTTTCACTCTCAGggtaaaacataaaacaaaaatattttctgaGTGTAGAAACTGAGTatgaattaaaataaatctATAAAAATAGGAAATCAACTCCTTTTACTCAGATTTATCACACAATCCACAGCAGCAAGCATTTACACCTGACTATGGATGCTCTAGGTTTTTCTTCATACAGATGATTCAGCATGGACATCCTCCTTTATCCATAAGGATACCACTTAATGGCAATGGTCCACTCTCCCTTTATCAACCTAAGCTACTCCATACTGTAAACTTCACCTACAGTGGAGCATTTTTTTTTGCCTAAATCAAAGTCATAGATAACTTAAACTACTGCTTTCCTAAACTGGTGGTTTGTATTACATAGCCATTACATATTGACTTGTTGATTAGTTAACTGATCTCTTTGCTCATGGTGACATCCACCATTGATATACTATAACAGTgcttcaaaaatgttgaaatgtcaaagaaagaaaaggttAATCTTAATTTCCCTTACATCAAAGGCACAGTCAGTCATATCGCTGCTGTACAAGTTTCTGCAGGACACTGACCATGTATGCCAATGTCTTTTTAAAACAGCAGCTAGGTCAGATAAGTATATTGAGCTAAAAGGCACTAGTAAGCCACCCCTATCTTACTCCTCGTCAGAGCCATGAACTGTAGAAGTTGGCATTATGGACCAGATCCggataaaatacaattttacacaaaagaaaaaaaaatgaaacattgtCAGTGGATAATCCCGTATCCGTTGTTTTCTCAAGTGTACTTAAGTCTTCAGTTATCCTAATTATTCAACCAAATATTAGTTAAAATCTGAAAACATCATCAGATCTAACTTATTGCACCCCATATAGAATTTTTACAGCAAACATCATATACATAACACTGACTGAGCAACAGTATGAGGCAGCCATAACTTAACtgtggtaaaataaaaaataaaaatatcagaaggaaaaaaaaaagtagcataaaacatttaaatttgcTTTCATTGGCACACATTTTGTACAACGTTCCAGTTAAAACTACTGAATTCAAGTACTAGATGGCAAGATATGTTTAGGAACCGCGATGGACATAAACTCTTTCCACTAAAGTATTGTTATAAGATAAGCGAGGGATCTGATATTATGAGTGGAATTACCTGCAAACCTTTCACCTCTGACACCTTTATCAGACAGATGTTACTGATGTTTGGCTACTAAGAGAGAgcaacattcaacacacaagaAGAAGTGTTTAAATTATTCCCCTTTTATACTAAATTCTTTGAGCATTAGTGCATCAGTTTAAACATAAGACCCCAGACCGACAGTCAGAGCTGTGAAGCCCTTTTTGAATAATCTAGTTTATCTAGATGGCATGTAGAAATCATTTTATCTATCGGTATTTGTGTCACGCATCATATCAAGTTTCCCAAAACTTCCAAATAGCATTCACTCCAAATGTGACTCAGTCCAGTTTTCTAAAAgcacaatgacaaaaaaaaaaaaaaattcaaactgaaatgaattaataataatgatgaatgTATCTGTTGTTGCGGTGATGTGGGCTTCCCGTCCTATTGCTGAGGGAGTGTTGAGGAGGTTGCTTGGATTATTCCCAGTCTGCCATTCACTTGGACTGTCTTTGAGGGCACGGCAACCTTTTTTTAGCCTGTCAGCAGCCGATCCAGAGCGAATGGCCTCCAGCATAGCCTCCCTGGCCAAGGCAGGGTTCACAGGGGCGTTAGCACTTGGATGTGCCACAGTGCTAGGCTTAGCCTGAGgcaagacaggaggaggaggaggaggtggaggtgcAATCacgggtggtggtggtggggtaaAGACAGGAGGAGAAGTGCAAGCCAAAGAGGGAGGGCCTgcacctccctcctcctcagtaGTTGCCTTCCTGAACTTCTCCAGCTCGTCAGCAGCCTCCGATTTGGTCTGTAGGGAGTGACACATCGGTAactagacacacaaacacaggcggCAGGCCAGCTGCTCTCACATACGTGCAATTGAACTTACACTCCTAACACACAAGGGCTCAAGATCTCATTTCCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96863 True 2332 lncRNA 0.39 2 14514667 14517897

Neighbor

gene id symbol gene type direction distance location
zgc:110410 LOC104941306 coding upstream 445719 14058640 ~ 14068948 (+)
LOC120562882 LOC104926221,LOC103388613,LOC103353832 coding upstream 893323 13609618 ~ 13621344 (+)
LOC120561886 LOC103353818,LOC102295432,LOC102785128,LOC101482972 coding upstream 1096215 13414324 ~ 13418452 (+)
rspo3 rspo3,LOC103353817 coding upstream 1102746 13395438 ~ 13411921 (+)
trmt11 trmt11 coding upstream 1250575 13252697 ~ 13264092 (+)
LOC120561614 NA coding downstream 66138 14584035 ~ 14588452 (+)
si:cabz01093077.1 NA coding downstream 72346 14590243 ~ 14593984 (+)
LOC120561707 NA coding downstream 82992 14600889 ~ 14603683 (+)
LOC120561930 NA coding downstream 86055 14603952 ~ 14607904 (+)
LOC120561617 NA coding downstream 94015 14611912 ~ 14619881 (+)
G72466 NA non-coding upstream 350923 14163536 ~ 14163744 (+)
LOC120561831 NA non-coding upstream 426871 14086603 ~ 14087796 (+)
G72319 NA non-coding upstream 981665 13532125 ~ 13533002 (+)
G72314 NA non-coding upstream 1031556 13475370 ~ 13483111 (+)
G72309 NA non-coding upstream 1041197 13471751 ~ 13473470 (+)
G72551 NA non-coding downstream 86087 14603984 ~ 14604638 (+)
G72559 NA non-coding downstream 115183 14633080 ~ 14633375 (+)
G72560 NA non-coding downstream 116280 14634177 ~ 14635023 (+)
G72561 LOC103365327 non-coding downstream 119973 14637870 ~ 14640768 (+)
LOC120562067 NA non-coding downstream 126479 14644376 ~ 14645788 (+)
G72506 NA other upstream 88487 14425794 ~ 14426180 (+)
LOC120562174 rbms3,LOC101066789,LOC103370884 other upstream 144576 14175817 ~ 14370091 (+)
cmc1 cmc1 other upstream 370371 14133584 ~ 14144296 (+)
LOC120561928 csmd3,LOC101478087,LOC108232275,LOC102799137,LOC102309299,LOC102195523 other upstream 468531 13754053 ~ 14046136 (+)
LOC120562711 eif3h other upstream 826153 13624448 ~ 13688514 (+)
LOC120561718 LOC107101581 other downstream 108581 14626478 ~ 14632721 (+)
irx4a LOC103360443,LOC102233360,LOC103478376,LOC108232226,LOC101474805,LOC102784018,LOC102295185,LOC102202030,LOC104961814,LOC103145173 other downstream 1035567 15553464 ~ 15560292 (+)
G72750 LOC104952694,LOC106925895 other downstream 1500462 16018359 ~ 16072201 (+)
G73031 LOC103366415 other downstream 2931688 17449585 ~ 17452568 (+)
ubxn11 NA other downstream 2938746 17456643 ~ 17461118 (+)

Expression


Co-expression Network