G72551


Basic Information

Item Value
gene id G72551
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 14603984 ~ 14604638 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU96909
acaaaacaagacatttgaggccgtcatcttgggctttttggaaAAAAGTGGTCAACATTTTTGAccatttctgtcattttatagaccaaacaactaatcgattaatagagtaaataatcaacagattaatcgacaatgaaaataatcgttaattGCAGCCATTGCTGAATTACATCATACAATATTTCCAGTAtttttcacctttatttatttattcagggagaGTACACTGAGAGCAATGCTctcctgatcacattcacacagttacacattcatacctggaagctgcccagtacaaccacagtctgatctgctggccactgagcagctccactggagcagttggggttaagggACTTGCTCAAGGGCCCCTCAGTTGTGGTGATGAGTGTGGATTTTCACTTTCCCctcccagattttatcctgccgTTTTGGGGATGGAACCGGTGACTTACTGTTTATTATCAAGGGTAAAACGGTATCTTAACTgattattatttgtttaaatgtttatgtCTATATTCTATTCTAAAGAAAAGCATCATATTGTAgcatctgttgttttttttgtcacagcaATCATGCTGATATATGTGACTGAACGTGCCAACACAAGcatatatttttgtaatgttGAAGTTATGTTTAATGTGtc

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
TU96909 True 655 lncRNA 0.37 1 14603984 14604638

Neighbor

gene id symbol gene type direction distance location
LOC120561707 NA coding upstream 301 14600889 ~ 14603683 (+)
si:cabz01093077.1 NA coding upstream 10000 14590243 ~ 14593984 (+)
LOC120561614 NA coding upstream 15532 14584035 ~ 14588452 (+)
zgc:110410 LOC104941306 coding upstream 535036 14058640 ~ 14068948 (+)
LOC120562882 LOC104926221,LOC103388613,LOC103353832 coding upstream 982640 13609618 ~ 13621344 (+)
LOC120561617 NA coding downstream 7274 14611912 ~ 14619881 (+)
LOC120562066 NA coding downstream 98785 14703423 ~ 14704824 (+)
dnah5 dnah5 coding downstream 157732 14762370 ~ 14874113 (+)
trnae-cuc_16 NA coding downstream 421944 15026582 ~ 15026653 (+)
irx2a irx2,LOC102783739 coding downstream 803540 15408178 ~ 15414047 (+)
G72520 NA non-coding upstream 86087 14514667 ~ 14517897 (+)
G72466 NA non-coding upstream 440240 14163536 ~ 14163744 (+)
LOC120561831 NA non-coding upstream 516188 14086603 ~ 14087796 (+)
G72319 NA non-coding upstream 1070982 13532125 ~ 13533002 (+)
G72314 NA non-coding upstream 1120873 13475370 ~ 13483111 (+)
G72559 NA non-coding downstream 28442 14633080 ~ 14633375 (+)
G72560 NA non-coding downstream 29539 14634177 ~ 14635023 (+)
G72561 LOC103365327 non-coding downstream 33232 14637870 ~ 14640768 (+)
LOC120562067 NA non-coding downstream 39738 14644376 ~ 14645788 (+)
G72634 NA non-coding downstream 396033 15000671 ~ 15003134 (+)
G72506 NA other upstream 177804 14425794 ~ 14426180 (+)
LOC120562174 rbms3,LOC101066789,LOC103370884 other upstream 233893 14175817 ~ 14370091 (+)
cmc1 cmc1 other upstream 459688 14133584 ~ 14144296 (+)
LOC120561928 csmd3,LOC101478087,LOC108232275,LOC102799137,LOC102309299,LOC102195523 other upstream 557848 13754053 ~ 14046136 (+)
LOC120562711 eif3h other upstream 915470 13624448 ~ 13688514 (+)
LOC120561718 LOC107101581 other downstream 21840 14626478 ~ 14632721 (+)
irx4a LOC103360443,LOC102233360,LOC103478376,LOC108232226,LOC101474805,LOC102784018,LOC102295185,LOC102202030,LOC104961814,LOC103145173 other downstream 948826 15553464 ~ 15560292 (+)
G72750 LOC104952694,LOC106925895 other downstream 1413721 16018359 ~ 16072201 (+)
G73031 LOC103366415 other downstream 2844947 17449585 ~ 17452568 (+)
ubxn11 NA other downstream 2852005 17456643 ~ 17461118 (+)

Expression


Co-expression Network