G72561 (LOC103365327)


Basic Information

Item Value
gene id G72561
gene name LOC103365327
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 14637870 ~ 14640768 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU96921
GTTGTTCCTTGTACGTTTAATGGCAAAATAACAGGACAAAATAAGATATTTACAACACTTAGTAACATGTAAACACAATCTTCTGTACAAAGAAATATACatgcaaaagtaaaaataagtcATAATAAGACATTCAAAATGACATTGCTGCAGTCTTGTTCTATGTGTATTTAAAATATGACATAGTTAAGAGGTTTACATCCTGGGTGTGGGCAAACTGCCCAGCCCTCTCTGTACATCTTTACATCATGTATAGGCTGGGTTTCCCAAAGGCATTTTATTACTTAGATCATATTCTTCCATGAATAGGCTTTAAGAGAATTTGATTTTGATAAACCGATTAACAGCATGATTTTGGGAAACCTAGATCCAcaccaataaataaaaatgacacaaaatgaAAGACTGTACAGACCGACAAAAGTCATTTAACTCAACATGTTATTGACTTGTTTAACATTAAATCAGATATTAACTCTTACAGCCTTCAGATAAAATAAGAAAGTTTGCACGTTTTAAGTTCCACCCACCTCTCTAGGTTGGCTCCCTCAACtggcacttaaaaaaaaagttttcaacaACTTTGTAACCGAAATACATCAACTTATTCAAATGAAAATAACTGGAAGAgacctctttcacggcagataCCTGTTAATGCTGAATGAATCCTAAAAGGTTTAATGCATTCTTCAATAAATTAAAGTCTGTGGTAAATGGTCCACGATGAGACATTTTTCCAGACCTTTTGCTTGGTAAAAATGTCAACCAAGTCTGTCTTATGACGTACAACTGAGATGCTAAAAAAATCGAGCGACATACACCAGTATCTACCTACAAAAGCCAAACAAACTTACACAGCAAACCACTTTGTGCACAGCTTGAAAAAAGACAAGTgaaatattgttgttttttttcagcaaaAATCCACCAAACAATTTCTTATAACaataagaataaataaatccagACTGGACCCGTGTAACACTCACATGTCCTGGTTCAGTGTGGTCTGTTATAACTTAACATGAGAAACAAAAATCTAAACATttgagcaggaaaaaaaaagcatagtcAACTTTGGTATtgttacagaaaataaaaacagaacaatgACAAAATGAAAGCATAAGTGCCTATATTTTATAgatacacatttttttatacattatttCTGAAAACCCACCTCTTGTCTGGGGGGGGTTTCGCAGATATTAATACTGAACTTAATACGTAAGAGTTAACACAATACAGACATCTATCGCAGTACCAGGTACGTACATGCCTTTTTAAGAATACGGCTACAACACAAAGTCTTCATAAATAGTTGCATAAATGTTAAAGCTGCAACATTGCACATGGGAATTAATGCAAAATACGAGTGCATTTCTAGTAGCGGTTTGTTCATGGTGAAAATCCAGCTGCTGAGGTTCCGCAGGAAGCGACTTACCTAACAAACTGCATGGAGTCACTAATACTCGGCAAATGAAATAGCTTTTGTTCATTTGAGACAAATTCTTCAAAATGATAATGAAAGGCAGGAATTCGTTATTTACAAATAAGGCGAATGCAGGTAAAAACCGGAGAAGCTTTGCCGAATAGCTTGTTGAAGTTAATTTAGTTTCCCTTAGTGTCACAAACTGAAAAGATTATACCTTTTAAATTGAACAGGGACATAAAGATAAGCAAACTATTGCACTGAATGTAACTATAATGTGTTTGTGGAAAACATGGTTTTGGTCTTTATCTTATTCTAGAATAAGTGGACCCTGCTGATGGGTGCCACTTTGTTCACACATCTCACTCctcctttgtttttattttacgtACTAACTCACCTTTGTTTTCCAAAAGGTACGAATAAAGACAGTTCTCTGTTTCCTCACTGtacatggtttcatttacaAAAAAGTAATCTctcattacaaaaaaacattttctcgtGTTCAACCGAAAGCAGCCTGAATTTCTCTTATTATACAGTATCATATTTTCTCTGTTCAGCACTGTTCGACTTGCTCAAGCTTGCTGAGAAAAGCTTGTTGAGAAAGCTCGGTTTTCTCTCCCTGCTAAGTCAAGGTTTGAAAGCTCAAACTGATTCCAGCAGTTCATTTGTTGTGCAGGCATAATGACAATATGCCAAGGTGTGTTCAGGAGGGGAGTTGGGGAGAGTCAAAGGGTTTATCAGCAGAGTCGCtcagtcagcagcagcaggacttTTGTGGCTTAGTGAAGGAAAAGGTGATCATTGTGGAAAAGTTGCTGGTGGTCCTCTCAGTAACACAGTGCAACTGAACAAAGTTAACTTGTTACCCATCCTCCATAGTGTGCTGGCCAGTCAGGAATTCCTTCTATACCACAACAATGCAGATAACAGGTCTCTACAGTACATGTTGCTGTCACATCTACCTAGTGAGCTGTTTGTTAGATGTGGTTGAGCAGGCGGCTGTGAAGGAAGGCCTTAATGGTGCCAATGGGCCGAACATCGTTCTGGTGTTTCCGTCTCTCGATGAAGGAAATGAGTCTGGAGGTATCCAGATGTGAGGTGTGATGATTCTGAGATGTTGGCAGCGGCGGTGGCTGCGTAAGATTTAAGGTGGCATGGCCAGCGTCAAAATTGATCACACCTCGAGGCAGGAGCCAGGGCTCCTGCAGGCAGGACGCTGCAGAGGGCCGTCGCTCCGGCTCGCCCTGGAGCAGCAGGCAGACAAAGTCCCTGGCAGCTGGGCTCACACCCTGGAAGTAATCCTCGGGGAAGCTGAAGTCCAGGCGACAGATGTTCAGACACGTCTCCTCCAAACTCTCGTCCAGGAAGGGAGAGGCGCCACTAAGTACAACGTAGGTCACC

Function

NR:

description
PREDICTED: triple functional domain protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96921 True 2848 lncRNA 0.40 2 14637870 14640768

Neighbor

gene id symbol gene type direction distance location
LOC120561617 NA coding upstream 17989 14611912 ~ 14619881 (+)
LOC120561930 NA coding upstream 29966 14603952 ~ 14607904 (+)
LOC120561707 NA coding upstream 34187 14600889 ~ 14603683 (+)
si:cabz01093077.1 NA coding upstream 43886 14590243 ~ 14593984 (+)
LOC120561614 NA coding upstream 49418 14584035 ~ 14588452 (+)
LOC120562066 NA coding downstream 62655 14703423 ~ 14704824 (+)
dnah5 dnah5 coding downstream 121602 14762370 ~ 14874113 (+)
trnae-cuc_16 NA coding downstream 385814 15026582 ~ 15026653 (+)
irx2a irx2,LOC102783739 coding downstream 767410 15408178 ~ 15414047 (+)
LOC120562533 lpcat1,LOC103360438,LOC100699650 coding downstream 978748 15619516 ~ 15653052 (+)
G72560 NA non-coding upstream 2847 14634177 ~ 14635023 (+)
G72559 NA non-coding upstream 4495 14633080 ~ 14633375 (+)
G72551 NA non-coding upstream 33232 14603984 ~ 14604638 (+)
G72520 NA non-coding upstream 119973 14514667 ~ 14517897 (+)
G72466 NA non-coding upstream 474126 14163536 ~ 14163744 (+)
LOC120562067 NA non-coding downstream 3608 14644376 ~ 14645788 (+)
G72634 NA non-coding downstream 359903 15000671 ~ 15003134 (+)
LOC120562980 NA non-coding downstream 460048 15100816 ~ 15163246 (+)
G72680 NA non-coding downstream 949129 15589897 ~ 15590158 (+)
G72704 NA non-coding downstream 1196194 15836962 ~ 15844938 (+)
LOC120561718 LOC107101581 other upstream 5149 14626478 ~ 14632721 (+)
G72506 NA other upstream 211690 14425794 ~ 14426180 (+)
LOC120562174 rbms3,LOC101066789,LOC103370884 other upstream 267779 14175817 ~ 14370091 (+)
cmc1 cmc1 other upstream 493574 14133584 ~ 14144296 (+)
LOC120561928 csmd3,LOC101478087,LOC108232275,LOC102799137,LOC102309299,LOC102195523 other upstream 591734 13754053 ~ 14046136 (+)
irx4a LOC103360443,LOC102233360,LOC103478376,LOC108232226,LOC101474805,LOC102784018,LOC102295185,LOC102202030,LOC104961814,LOC103145173 other downstream 912696 15553464 ~ 15560292 (+)
G72750 LOC104952694,LOC106925895 other downstream 1377591 16018359 ~ 16072201 (+)
G73031 LOC103366415 other downstream 2808817 17449585 ~ 17452568 (+)
ubxn11 NA other downstream 2815875 17456643 ~ 17461118 (+)
G73123 phactr4 other downstream 3004745 17645513 ~ 17647186 (+)

Expression


Co-expression Network