G72634


Basic Information

Item Value
gene id G72634
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 15000671 ~ 15003134 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU97010
TCTATTACGTCAGTCATTTGCACATAACCCAtcctaattacacacacacacttaagctGGGGATTTGGCTCCCGTCAATATGATGCAACAACCCATCGATCATCCTCAGGGTGCTTATTAAAAGCGGCATTGAAAATGAGGGTTTAATGCTAATATCACGTTGAGTCCATCAGATTGGTGTGCGGGGTGTTCAAATAATCACTGACTCTTATAACCTATGATCTTTGCCAAATTTTGGTTTCGTGAATGGCTCTACTGAAACTCCAGCAATGGGAAATCTGTGACATCCCAAGCTCAAGTCCACTTATAGATTGCTGTGTAAATTATTAGCTTTGAAACCTTGTCTCACAAGATGTACAAATGCTGACTTTAAATATATGGGAGAGGAAAATCTTTGAAATATAAGGCCCTCTTGCCTTTAAAATTATGAactttgaagtaaaaaaaaaataaaaataaaaatgttgtgacatgatgttaatgttaacaatcATTGACTGCAGTAGGAGTCTCCTCCTGGAGCACACACCTAGAAGCggtgtgtaaaaataaaagccaAGAAAACCTGGCAGTGCTTATAGAAACAATAGGTAATACAGAAAGCGGACTACGTACAGAAAAAAGGGCAAATTTGGTCATTTAAGAAGGCAGTTAACCTGTTGCTTTAACAGAATCAAAAAGGAGACATAAGGCAGAAAAAGCACTTTGCTGGTAATAAGTAGCACCAACTATTTTTGAAATGACATGAGTAAACCCTGCTAAAAACGATTCATTTCTCCAGTACAGCCTAGGAAAtgcaccaaaataaaagtcaaCCTACTGCTAAAAGTGATAAAGAGTAGTGGTGGAAATCATTTGGACAGGCAGTTGGAAAAATTTCAAGTGATCATAATACAATGGTAAATCATGTCATATTTGGCACATTtctcaggacacacacacacacacacagacacacacacacacacagagacacacacacacacacacagagacacacacacacacacaccccccatcTATTGCACAGGTCAatgtctaaataaaaaaaagcaaacctaTAGTGGGGAGAACCCCTAAAATATaactaaaatgtgaaataaattaaataaaagcaattATTGCACATGAACGCAACAAACAAAAAGGTGGCAATGTTtaccaaacaaaaacaaaacatgtagtgccaatgtgaagaaaaacaaaagcccTCAGTGACAAACAAGGAAACAAATGaccaacacacaaaaaagaaacttGGTACATTCAAACAAGTCATCACAGTTTAAGACTTTTGGACAAGGTCCGTTTTGTGCCGTCACATCAAAAACATCAAGTCAGCGTTGCGCTGCATAGGTAGAAAGGTAGTGCTTTGCTTCAGTCCAGAGTACAATTCGTAGATGATAGTCCAAGCTGTAAGAGCTCAGAATCAAGAGCATAGTCGAGAGGGAGTTGCATTCAGAAGACCAGACGCGCTCCAAACCTGATCAAAAAGGCCCAATAAGAGTCAAAACTTGAGGAGAACCAAACCAGTTCAGTACTATGGCACATGAAGTTGCATGAAAACTCAATACTTGACCGAACTCTTCAGCCGACCAGCCAGAGCCTTTAGCTGCTGGAAAGTGACACTGGTGAGCAGACCGTCAGGGAATCATTCATTCCTGGATCAACTCAAAGTCTGTGCTGGTGTGCATCAAATTTCAAGGAAGGGCCTCTGACTATCATCGGACCGATGAAACAAAATGAGCACAGTTAAGACTTTTAGTCTTCCCTCATCTGCAAGAGCCTTGTAGCCTTACCAAGTGCTTGCAATGCTAGCAGACATCAATCATTCGAAACCTTTGGAGTCCACTTCAATTGACTTGTGAATTCCTTGACAAAAAGTAGTTGAGTTTTTGAGAGCCTCCGACAAAACACAGGTGTACCAGGAATTCTTCACAGCTCCTCAACACCAAGACCCGCGATGGGCTAAGTGAGGCCCTAAAAAAACCAATGCCAGTCAAGTCCTGCATGCATTTCATCTGCTCTGGTTAAGAGCAGGAAGATTGTCCCTCTTCCTGCGGCGCCAGGTGTTGCGGTTGTACTGCTGCTGGTTCCTGAAACCCGGTGCCGTGTTAGGACTCTGGGGAACAAACCGCTGCTGGGGACTGAAGGTACCTTGAGAGTGATTTTGACCTTGGAGGCTGCCACCGTGGTTGTGCTTGAAGCCAACTTTGTGCGGCTCAAGTGAGCCTTGGGAATTGGATATCATGGTGTAAGTGTGGCTATGCTGCCCTCCCATCTGTGGGTGGTGAAGCTGGTGGAGGGGGCTTGTGGAGTTAGCGTGCTGGGACATGTGTGCAGCTTGTGACATGTGACAGTGCACAACGCTGATTGAAGGTGGATTCTCATGGTAGAACTGGCAATCGGAGAACGAGGGGATGGTTAGGTTTTCAGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU97010 True 2438 lncRNA 0.43 2 15000671 15003134

Neighbor

gene id symbol gene type direction distance location
dnah5 dnah5 coding upstream 126558 14762370 ~ 14874113 (+)
LOC120562066 NA coding upstream 295847 14703423 ~ 14704824 (+)
LOC120561617 NA coding upstream 380790 14611912 ~ 14619881 (+)
LOC120561930 NA coding upstream 392767 14603952 ~ 14607904 (+)
LOC120561707 NA coding upstream 396988 14600889 ~ 14603683 (+)
trnae-cuc_16 NA coding downstream 23448 15026582 ~ 15026653 (+)
irx2a irx2,LOC102783739 coding downstream 405044 15408178 ~ 15414047 (+)
LOC120562533 lpcat1,LOC103360438,LOC100699650 coding downstream 616382 15619516 ~ 15653052 (+)
slc6a3 slc6a3 coding downstream 654107 15657241 ~ 15675222 (+)
LOC120563110 dcdc2,LOC102296430,LOC102788673 coding downstream 679285 15682419 ~ 15707502 (+)
LOC120562067 NA non-coding upstream 354883 14644376 ~ 14645788 (+)
G72561 LOC103365327 non-coding upstream 359903 14637870 ~ 14640768 (+)
G72560 NA non-coding upstream 365648 14634177 ~ 14635023 (+)
G72559 NA non-coding upstream 367296 14633080 ~ 14633375 (+)
G72551 NA non-coding upstream 396033 14603984 ~ 14604638 (+)
LOC120562980 NA non-coding downstream 97682 15100816 ~ 15163246 (+)
G72680 NA non-coding downstream 586763 15589897 ~ 15590158 (+)
G72704 NA non-coding downstream 833828 15836962 ~ 15844938 (+)
G72705 NA non-coding downstream 841176 15844310 ~ 15847320 (+)
LOC120562129 NA non-coding downstream 966043 15969177 ~ 16009134 (+)
LOC120561718 LOC107101581 other upstream 367950 14626478 ~ 14632721 (+)
G72506 NA other upstream 574491 14425794 ~ 14426180 (+)
LOC120562174 rbms3,LOC101066789,LOC103370884 other upstream 630580 14175817 ~ 14370091 (+)
cmc1 cmc1 other upstream 856375 14133584 ~ 14144296 (+)
LOC120561928 csmd3,LOC101478087,LOC108232275,LOC102799137,LOC102309299,LOC102195523 other upstream 954535 13754053 ~ 14046136 (+)
irx4a LOC103360443,LOC102233360,LOC103478376,LOC108232226,LOC101474805,LOC102784018,LOC102295185,LOC102202030,LOC104961814,LOC103145173 other downstream 550330 15553464 ~ 15560292 (+)
G72750 LOC104952694,LOC106925895 other downstream 1015225 16018359 ~ 16072201 (+)
G73031 LOC103366415 other downstream 2446451 17449585 ~ 17452568 (+)
ubxn11 NA other downstream 2453509 17456643 ~ 17461118 (+)
G73123 phactr4 other downstream 2642379 17645513 ~ 17647186 (+)

Expression


Co-expression Network