G72859


Basic Information

Item Value
gene id G72859
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 16959788 ~ 16962840 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU97321
CAGTAAAATAGACAGGAATTAATGAACAACTATTAAAATATAGGGACAATGACAAAGCCTTTATTAAACAGTGCAAAAAtttacagagatacagacattTACAGCATTTGGTTTTACATAAAAAAGTGTCAGCTCAGGTCAGTCCCAATTATTAACAATGACTAAAGactgcaaaacacacacgcacacacacacacgcacatgtgcacacacacacacacacacacacacacacacacacacacacaattttacaCCCTCTGCTctcatttctttcttacaaatTGTTGTTCGGGACATAAAATGTGGGGAGACTACAAGCAACCTACTACTGTAATACATAAAAGGTGCATGCTCTACCATGAAACAGTTGGTTACATGCATCATTTAGAAACTACAAATTAATAAGCAAACTCCAACCCACAAGAAAAATCTGTATAAGATACTGTAACCTAGTTTAAATGATGCGCAGCAATATTTATTCTAGGATTAGAGATCTAAATTTATCCATATATCATCCATGGATTAAAACTGAGATATTATGTCATGAACTGCTGATAATGTGAAAATTCCTCCCTGACaaagtaacacaaaaaatatgTGTAATACCTGCAatggtttcattttctttgCAAATTTCTTTAGTCagtgactgggaggagtggttTACCCTTACCTCTAGAATAAAAGTGATGAATAGAGatacttcatttaatattatttACAACTAGTTTACATCCCTCCGTCATTTTAGAATGTGTGTAATGCATTATAACTGTAGAATTATTAACGTTtccttttgttttaaataacacaTATGTACTTTTAACTTGGCTTGAAAGCAGCTGCTGCTGACAAAGATGTTTACTTTTGTGGGTGTCAGTAAACAGAGCACAATATAATGCACGCATCAATATGTAAACACATCATTTGAGCACGATGAAATTATATTAAAACGGCAACTGTGACAAAACCAAATGAAGGCTTTATGTTTACCAAAATGCTTCATCTAGCATTTCAGAAGCTGATTTTGATACTGAATGGCAGAAAATGCTGCTTGAAAATGAGCCCTTTTATCTCCAGTTACACTGAGAACAGACATCAACAGGACTAATGTAAAAGATAGGGTCAACTTAAAGTATTGACctaatttacagtaaaaacactGAGCTgttaaaaacttttttaatCCTGTGTTTTAGTGTAAAAAGTGTCTCAGGAGTTTTTCCAAAAAACAATCTCAAAGAAACACTCAGAAATACTGCATGCCATTTCATACCATGATTATGGGGAAGTTTGAAGATATTGAACACCTgtacaaaataatgaaaattcAATGGTATCTTTACAAAATATCTGGTATGATTTGACGTTTTGAGGGCCAATAGAACAGGTATATCATAATATAAAATTTCAATGTTATCATTATCCCTGACCCAACTTTGTGTCTTTTCCATCTATATCTATACTATCTATATCCCTGAACAATTAGCTACAAAACCTTTTATGTGATTTTCTGTTCCTTGCCCATCTTTGCCATCTTTCTTCACTGTAATCTATGTTGTGAAGCAAACCAATAACCATTTGTTTctttaaaagacaagaaatcaCAGAGATGGGTTCTAATGAAACTGCTGTCAATTCCCAGGGTACACCAGGGCCAAATGTAGCCTGTATATTTTAGTGTTTGTGATAGTGACACAAGGCTGATATGGTTGGATTCCTGAGGCATTTCTTTGAGGGATCATGGTATGCAGCAACATTTTGGCCTCAGTGTAAGTTTATTCTCACCCTACTTTGCTCCTTTGAGTTCCCTCACAAAAAAATATGTCACATCCTGAACATGGTGTCAATGGAATTgaagtttctttattttaaagtcGAGAAACTACAAACTAACACGGTGGAAAATTACTTCAGGCACACACAGTGAATtatgaaaatgcaaaaaaaataaaataaaactatagtTCTTCCTAATATATAGCCTATCAGAGAGAGTTTAACATGGTTAACtggtattttattatttaatggCGTATAGGTCTTGTAGAAGAGGATAACTTTACACTGGGGACATGGTAAAATCGAGCATATGTACCATAAAAAAGGGCAGTAAagtaaaacatgtatttttaatgtgcaTTATTCTGTGTTCATGTGATAAAGAAGACCTTTATCTATAATTtaagccatttaaaaaaaaaaaaaaaaaatgtgacacaTCTTAAAGGAAATGTGAGGACAGggcatatattaaaatattGCTGCATAACAGGAATGACCCAGGTACAAAAtgtctttggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttcacattgTGCAGCACTTGTTCTTGTGTGAATTAGAGTCTTTGAAGCGGAGTCTCTGCTTGGATCGATATTTCTCCAGGTAGGTTAGCTGTTTACTGTTGATGGCTCCACGACGTTtcctgaaaaacacacaaggacaaaatTGTCTGATAAGTTGAATAGCATCTTCATACTTCATCCCACTCTCTATCAGAGCCAGAGCAACCAGCACAGGAGCCCTGTAtgcatgcataaacacacacagagtcatgtCCATGTGTTATGAGTCTGATGTTTGAGTAAAAATAATTATTCCAgccatttttttataaaaatgtgaCACATCTTAAAGGAAATATGAGGACAGGGCATAAATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU97321 True 2712 lncRNA 0.35 2 16959788 16962840

Neighbor

gene id symbol gene type direction distance location
sntb1 sntb1 coding upstream 61823 16858023 ~ 16897965 (+)
LOC120562165 nov coding upstream 109556 16845953 ~ 16850232 (+)
LOC120563118 scgn,LOC103369094,LOC103151166,LOC106960462 coding upstream 128625 16816442 ~ 16831163 (+)
LOC120562315 NA coding upstream 143531 16732632 ~ 16816257 (+)
LOC120562939 NA coding upstream 230440 16726348 ~ 16729348 (+)
LOC120561714 NA coding downstream 21771 16984611 ~ 16990597 (+)
LOC120561713 ptk2 coding downstream 32469 16995309 ~ 17065077 (+)
mrs2 mrs2,LOC105917271 coding downstream 116567 17079407 ~ 17093876 (+)
LOC120562623 NA coding downstream 132216 17095056 ~ 17107677 (+)
LOC120562784 cpq coding downstream 147036 17109876 ~ 17129613 (+)
G72852 NA non-coding upstream 228744 16730837 ~ 16731044 (+)
G72801 NA non-coding upstream 465213 16494237 ~ 16494575 (+)
G72798 e2f3 non-coding upstream 469407 16489593 ~ 16490381 (+)
G72797 NA non-coding upstream 473869 16485713 ~ 16485919 (+)
G72796 NA non-coding upstream 477290 16482255 ~ 16482498 (+)
G72879 NA non-coding downstream 28876 16991716 ~ 16991989 (+)
G72862 NA non-coding downstream 102749 17065589 ~ 17065911 (+)
trnar-acg_16 NA non-coding downstream 405863 17368703 ~ 17368775 (+)
G73019 NA non-coding downstream 429428 17392268 ~ 17403627 (+)
G73027 NA non-coding downstream 464988 17427828 ~ 17463027 (+)
G72750 LOC104952694,LOC106925895 other upstream 887587 16018359 ~ 16072201 (+)
irx4a LOC103360443,LOC102233360,LOC103478376,LOC108232226,LOC101474805,LOC102784018,LOC102295185,LOC102202030,LOC104961814,LOC103145173 other upstream 1399496 15553464 ~ 15560292 (+)
LOC120561718 LOC107101581 other upstream 2327067 14626478 ~ 14632721 (+)
G72506 NA other upstream 2533608 14425794 ~ 14426180 (+)
LOC120562174 rbms3,LOC101066789,LOC103370884 other upstream 2589697 14175817 ~ 14370091 (+)
G73031 LOC103366415 other downstream 486745 17449585 ~ 17452568 (+)
ubxn11 NA other downstream 493803 17456643 ~ 17461118 (+)
G73123 phactr4 other downstream 682673 17645513 ~ 17647186 (+)
paqr7b LOC107588505,LOC104938075,LOC103388542 other downstream 788090 17750930 ~ 17779130 (+)
kcnn4 kcnn4,LOC104953880,LOC100704922 other downstream 1436216 18399056 ~ 18420721 (+)

Expression


Co-expression Network