paqr7b (LOC107588505,LOC104938075,LOC103388542)


Basic Information

Item Value
gene id paqr7b
gene name LOC107588505,LOC104938075,LOC103388542
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 17750930 ~ 17779130 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU97779
CTACGCGGTGAGAGCCGCCAGGCGCTGCTCCCGTCACGGTCATCCTTTCTCCGTTCACCCCTTCAAACAATGTTATCCAAACCATTCTTCGACTGCTAAACTCAAGGATTTGGATTGATTCTACCAGCTACAGTTTGCCATGGCGACGGTGGTGATGGAGCAGATCGGTCGCCTGTTTATCAACGCGCAGCAGCTGCGTCAGATCCCTCAGCTGCTGGAGTCGGCCTTCCCCACGCTGCCTTGCACTGTGAAGATATCCGACGTTCCCTGGGTTTTCCGCGAGCGTCATATCCTCACCGGCTACAGACAGCCAGACCAAAGCTGGCGCTACTACTTCCTCACCCTCTTCCAAAGGCACAATGAGTCCCTCAATGTGTGGACCCACCTGCTGGCCGCCCTCATCATCTTGGTGAAGTGGCAGGAGATCTCGGAGACGGTGGATTTTTTGCGAGACCCTCACGCCCAGCCCCTCTTCATTGTCCTCCTGGCAGCCTTCACCTACCTCTCCTTCAGCGCTCTCGCTCATCTGCTCTCTGCCAAGTCCGAGCTCTCCTTCTACAGCTTCTACTTCCTCGACTATGTTGGGGTGGCTGTCTACCAGTATGGCAGTGCCCTGGCACACTACTACTACGCCATAGAGAAAGAGTGGCACACTAGAGTGCAAGGGCTCTTTTACttttttttttctt
>XM_039804754.1
CAAGCAGCCATGTATCCTCCCAGCAGCTACGCGGTGAGAGCCGCCAGGCGCTGCTCCCGTCACGGTCATCCTTTCTCCGTTCACCCCTTCAAACAATGTTATCCAAACCATTCTTCGACTGCTAAACTCAAGGATTTGGATTGATTCTACCAGCTACAGTTTGCCATGGCGACGGTGGTGATGGAGCAGATCGGTCGCCTGTTTATCAACGCGCAGCAGCTGCGTCAGATCCCTCAGCTGCTGGAGTCGGCCTTCCCCACGCTGCCTTGCACTGTGAAGATATCCGACGTTCCCTGGGTTTTCCGCGAGCGTCATATCCTCACCGGCTACAGACAGCCAGACCAAAGCTGGCGCTACTACTTCCTCACCCTCTTCCAAAGGCACAATGAGTCCCTCAATGTGTGGACCCACCTGCTGGCCGCCCTCATCATCTTGGTGAAGTGGCAGGAGATCTCGGAGACGGTGGATTTTTTGCGAGACCCTCACGCCCAGCCCCTCTTCATTGTCCTCCTGGCAGCCTTCACCTACCTCTCCTTCAGCGCTCTCGCTCATCTGCTCTCTGCCAAGTCCGAGCTCTCCTTCTACAGCTTCTACTTCCTCGACTATGTTGGGGTGGCTGTCTACCAGTATGGCAGTGCCCTGGCACACTACTACTACGCCATAGAGAAAGAGTGGCACACTAGAGTGCAAGGGCTCTTTTACCTATCTAAGCTTTTGTCCTTTGGGGtcggggcgggggggggggggcccccgcTCCCccgccggggggggggggggtcagacCCAGTTGTGACGTACCATTTCTACCACATGGTCTTTTTTCTTATCAGCGCCTATTTCTTCTGCTGCCCTCACCCAGAGAGTTTGTTCCCTGGGAGGTGTGACTTCATCGGGCAGGGCCACCAGATCTTTCACATATTCGTTGTGGTGTGCACCCTGATGCAGATCGAAGCGCTGAAAATAGACTTCACAGAGCGCCGTCCCTTCTACGAGCGCCTTCACGGCGATCTCGCGCACGATGCCGTTGCACTCTTCATCTTCACTGCCTGCTGCAGTGCTCTCACTGCTTTTTATGTGCGCAATCGTGTCCGTGCCTCTCTGCACGAGAAGGAGGAGTAAGAGTTGACATGAgtgtgtgttaaaaaaataaataaaaagtcatttattttactcTGTAGTgaccattcatttaaaaataatgtttttgtcaatgaAAGTTATCAGTTTGTGATAGTGACTTATTTCTTCTTAATGTGATCTGCCAAACTACagtgatcttaaaaaaaaaaaaaaaaaagtgattaaggGTGTGTTTTTGTTACTTACAATGAAGAAAAGGGAAGCTCATCATTTGTCTGTAGCACTACAGGTAGTACTTAAACACGGCAAAGACTCTGCTTTTTTTCTTAGTCTGGTTTTAGTCATTGTCTAAAAGAATGTGGTTTTACTTCACCCTACACGAAATACGCTCTCTGTCAAGGTGAGCAGAAAAATGAGTTTCTTAAGATGCCTTTTACCCAATTGTA

Function

NR:

description
PREDICTED: membrane progestin receptor alpha-B-like, partial

GO:

id name namespace
GO:0007194 negative regulation of adenylate cyclase activity biological_process
GO:0007275 multicellular organism development biological_process
GO:0043401 steroid hormone mediated signaling pathway biological_process
GO:0001556 oocyte maturation biological_process
GO:0000187 activation of MAPK activity biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005496 steroid binding molecular_function
GO:0003707 steroid hormone receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU97779 False 689 TUCP 0.55 3 17750956 17779130
XM_039804754.1 True 1526 mRNA 0.50 3 17750930 17755055

Neighbor

gene id symbol gene type direction distance location
stmn1b stmn1,LOC100709726,LOC101465203,LOC105919219,LOC108245970,LOC102218266 coding upstream 3904 17741886 ~ 17747026 (+)
LOC120561605 NA coding upstream 9550 17739832 ~ 17741380 (+)
oprd1b oprd1,LOC104947907,LOC104938665,LOC103361913 coding upstream 127241 17617748 ~ 17623689 (+)
tcea3 tcea3,LOC103388456 coding upstream 157903 17584023 ~ 17593027 (+)
tent5ba fam46b,LOC102799042 coding upstream 183664 17562473 ~ 17567266 (+)
si:dkey-34d22.1 LOC103360192 coding downstream 313173 18092303 ~ 18105749 (+)
LOC120562800 LOC103360186 coding downstream 391699 18170829 ~ 18172243 (+)
LOC120562798 LOC104954816,LOC108249991,LOC102795480 coding downstream 530942 18310072 ~ 18311498 (+)
has1 has1,LOC102795195,LOC103143133 coding downstream 535539 18314669 ~ 18318666 (+)
LOC120562815 NA coding downstream 608215 18387345 ~ 18388459 (+)
LOC120562054 NA non-coding upstream 246009 17500589 ~ 17504921 (+)
G73027 NA non-coding upstream 287903 17427828 ~ 17463027 (+)
G73019 NA non-coding upstream 347303 17392268 ~ 17403627 (+)
trnar-acg_16 NA non-coding upstream 382155 17368703 ~ 17368775 (+)
G72862 NA non-coding upstream 685019 17065589 ~ 17065911 (+)
G73186 NA non-coding downstream 144820 17923950 ~ 17926628 (+)
G73216 NA non-coding downstream 335585 18114715 ~ 18116323 (+)
G73230 LOC104960016 non-coding downstream 345864 18124994 ~ 18127318 (+)
G73231 NA non-coding downstream 348293 18127423 ~ 18127887 (+)
G73232 NA non-coding downstream 349889 18129019 ~ 18129219 (+)
G73123 phactr4 other upstream 103744 17645513 ~ 17647186 (+)
ubxn11 NA other upstream 289812 17456643 ~ 17461118 (+)
G73031 LOC103366415 other upstream 298362 17449585 ~ 17452568 (+)
G72750 LOC104952694,LOC106925895 other upstream 1678729 16018359 ~ 16072201 (+)
irx4a LOC103360443,LOC102233360,LOC103478376,LOC108232226,LOC101474805,LOC102784018,LOC102295185,LOC102202030,LOC104961814,LOC103145173 other upstream 2190638 15553464 ~ 15560292 (+)
kcnn4 kcnn4,LOC104953880,LOC100704922 other downstream 619926 18399056 ~ 18420721 (+)
LOC120562807 NA other downstream 676444 18455574 ~ 18461326 (+)
LOC120562806 NA other downstream 687298 18466428 ~ 18470078 (+)
LOC120562796 NA other downstream 853272 18632402 ~ 18637307 (+)
LOC120562819 NA other downstream 873256 18652386 ~ 18655731 (+)

Expression


Co-expression Network