Gene
RNA
| Item | Value |
|---|---|
| gene id | G73499 |
| gene name | aplp1 |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053118.1 |
| NCBI id | CM020915.1 |
| chromosome length | 43092710 |
| location | 18908503 ~ 18911216 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| aplp1 | Predicted to enable heparin binding activity and transition metal ion binding activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in central nervous system; cranial ganglion; neurons; retina; and retinal ganglion cell layer. Orthologous to human APLP1 (amyloid beta precursor like protein 1). |
| description |
|---|
| PREDICTED: amyloid-like protein 1 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU98239 | True | 1061 | lncRNA | 0.44 | 2 | 18908503 | 18911216 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120562037 | NA | coding | upstream | 96131 | 18809356 ~ 18812372 (+) |
| LOC120562797 | ctrl | coding | upstream | 100089 | 18806002 ~ 18808414 (+) |
| hsc70 | LOC103359601,LOC103478507,LOC104932369,LOC106945881,LOC102237422,LOC106517696 | coding | upstream | 103204 | 18800355 ~ 18805299 (+) |
| si:dkey-238d18.4 | LOC104961375,LOC103359602 | coding | upstream | 109052 | 18790625 ~ 18799451 (+) |
| LOC120562035 | NA | coding | upstream | 134681 | 18749085 ~ 18773822 (+) |
| zmp:0000001114 | NA | coding | downstream | 23014 | 18934230 ~ 18956037 (+) |
| nphs1 | nphs1 | coding | downstream | 109938 | 19021154 ~ 19089959 (+) |
| fxyd5 | NA | coding | downstream | 184252 | 19095468 ~ 19101074 (+) |
| LOC120561940 | NA | coding | downstream | 205377 | 19116593 ~ 19120701 (+) |
| LOC120562624 | fcgbp | coding | downstream | 218308 | 19129524 ~ 19147793 (+) |
| G73493 | NA | non-coding | upstream | 34546 | 18872374 ~ 18873957 (+) |
| G73484 | NA | non-coding | upstream | 92906 | 18813309 ~ 18815597 (+) |
| G73377 | NA | non-coding | upstream | 157704 | 18750345 ~ 18750799 (+) |
| G73361 | NA | non-coding | upstream | 215533 | 18687042 ~ 18692970 (+) |
| G73338 | NA | non-coding | upstream | 343421 | 18501151 ~ 18565082 (+) |
| G73501 | aplp1 | non-coding | downstream | 178 | 18911394 ~ 18932173 (+) |
| G73568 | NA | non-coding | downstream | 213940 | 19125156 ~ 19125848 (+) |
| LOC120562630 | NA | non-coding | downstream | 237305 | 19148521 ~ 19158369 (+) |
| LOC120562629 | NA | non-coding | downstream | 247259 | 19158475 ~ 19159018 (+) |
| LOC120562631 | fxyd7,LOC103388498 | non-coding | downstream | 248248 | 19159464 ~ 19162804 (+) |
| kmt2bb | kmt2b | other | upstream | 46545 | 18833245 ~ 18861958 (+) |
| proser3 | NA | other | upstream | 79815 | 18819201 ~ 18828688 (+) |
| LOC120562824 | NA | other | upstream | 161828 | 18744662 ~ 18746675 (+) |
| LOC120562819 | NA | other | upstream | 252772 | 18652386 ~ 18655731 (+) |
| LOC120562796 | NA | other | upstream | 271196 | 18632402 ~ 18637307 (+) |
| G73570 | LOC103371659 | other | downstream | 237397 | 19148613 ~ 19158995 (+) |
| hcst | LOC104925504,LOC104961397 | other | downstream | 278804 | 19190020 ~ 19192102 (+) |
| si:ch211-254p10.2 | LOC102209663,LOC101158134,LOC102295699,LOC101064473 | other | downstream | 535951 | 19447167 ~ 19453283 (+) |
| G73779 | hdac9 | other | downstream | 735759 | 19646975 ~ 19649511 (+) |
| LOC120561838 | tppp | other | downstream | 1281474 | 20192690 ~ 20209327 (+) |
