G73586 (csnk2b,LOC102207154,LOC106573472,LOC101175345,LOC104925497,LOC102778826)


Basic Information

Item Value
gene id G73586
gene name csnk2b,LOC102207154,LOC106573472,LOC101175345,LOC104925497,LOC102778826
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 19272727 ~ 19276516 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU98390
ATTAGTCAACTCACCTTGGCACAAACTGGTTGGCTGGTCGCTTTGGACGATACTCTGGGTGCACCATGAACAGCATGTGGGGGAACCCTGTCCCAAAATAGGCTCCATCTGTGTGGTGGTGTCTGGAGGATTTAGGGGTGTAAACATCCATGCATTTTGGGCAATATAGCTTCACCATTGCTTCGCCAGGGATGTCTGACAAACCAATAGGAAGCATTGGCTGATTCTCACAATAGACTCTGGGGCAATAGCCAAAATCCCCTTGTTGATACTTTTCCAACATCTGTGCAATGCCTCGGTTTGTGAGGATGTAACGTGCATGTATGAGCCCGTAGAGCATCTCTGCTGCCTGCTCTATCAAGTCACTCTGATTGGGGTTGTCTTCAAGTTCCTCATCTGGCTCGAGGTCGAGAATCATGTCCAAAGCCTGGCGATAGTGAGGCACCTGCTCATTCAGACCTGTCAGGTTAAACTTGTCCTGTATGTAATCCTCATCAACCTCACAGAAGAACTCATTCCCTCTGAGTCCACAAAACCAGGATATCCAGGACACCTCCTCTGAGCTGCTCATCCTCCTGACAAACCAAAACAGAGTTGCAGTGGaccaatatttattattttacatccTCACTGTGTGGCTAACAGCTAATAACTGGCTGTTCATATTATTGAGATATGAACTTTACAAACACATTAAGCATTGTACTGCACTAGAGTTGCGACAAACAATCTGTTATCTCGGGGACTTTGAACACAAATGTGATGTTATCATAGCGAATCTTTATTTTACCGAGCTAGCTACGTAGTTTGCGTCTCTAACcttctgctaatgttagcttgcttgctagcGATCGTTAACGTTCACGCGTATAGTACAGATAGATAGTGTGGAAATTAAGTATTGTAACTGCAATGTGTATTTAGAGGCATTGTCTCCTGCACGTGTATAACTGTTTACAGAAAGTCACTTTTACTCACCCTTCTTTATATAAAGTTACCACATCAATTTACAACCTTAGCTAGTTTAACCTCGCTCCCTGGATGACACATCCGTTTTCCGGCCAACcagatttttcaaaataaagttcCTCATGCCATAGATAGGATACCGCAGAGAAAGGACAAGCGTTTAGGCTACATGTTCACTGATGTAAGGACATTTtggtaatatttatttttggccCGTGGTCTATCATCCAGATACATTTTGGCCcctaatataaaataatttggGCACCTCTGGTCTACACACCTTATAAACCACAGTGATATTCCTATATTTCTAATAGCAATATTATGGTATTTGTGTCTGAGATGATAATGGCCAATCCCATGTGAAGTCCACATCACTAGGTCATACATCATAGGTCGACGCAGCTAAAGCAACATCATAGAGACGAAATAGGTGCCTACTATAGCAGTTACAAAGCATTTAGTTGGCTAAATTGAGGGACATATGTAATGTGGTCACCATCAGACAAAGCAGAATGCACTAGCATCTTATATAGattcttttatttcataaaaaacaTAAGTTTGATATTTTGTCTTCCCTATTGACATTCATTTTAAAGCATTAAGTGATGTTTCAATAATTTCCTGCTGGGATGGAGAGCTTCTTCAGGGCAGGTCTGAAAAGGTTTTGCGAGGAGGTGGTGCAACATCTTTGTCCTGCTCCTTTCCCATGCCTTCAAACATCAATATCTTTTAgaattgcatttctttttccCAGCATCATGTTCAGGAAGTCGTTGTAACTGATGGTGTCTTTCGATGTCCCTCCAACAACCTCTGACATCATCTTTTTCAGCTCTAAGTGAGTCTTGGCCAATCCAAGTTTTTCCAGCATTCGTTTTAACCCCATTAAATCTATAAAATTGATAGTAAATCAGTAATAGgtaaatatgtgtatatat

Function

symbol description
csnk2b Predicted to enable protein kinase regulator activity. Predicted to be involved in regulation of protein serine/threonine phosphatase activity. Predicted to act upstream of or within Wnt signaling pathway and phosphorylation. Predicted to be part of protein kinase CK2 complex. Predicted to be active in cytoplasm. Orthologous to human CSNK2B (casein kinase 2 beta).

NR:

description
PREDICTED: casein kinase II subunit beta-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98390 True 1916 lncRNA 0.41 6 19272727 19276516

Neighbor

gene id symbol gene type direction distance location
LOC120562959 NA coding upstream 2958 19245358 ~ 19269769 (+)
LOC120562666 LOC102206297,LOC106517725,LOC104965579 coding upstream 51775 19211495 ~ 19220952 (+)
LOC120562665 NA coding upstream 61329 19205598 ~ 19211398 (+)
LOC120562955 LOC102233830,LOC107102542,LOC103371668,LOC108241910,LOC101156432,LOC107378666,LOC101063201,LOC103388495,LOC102205547 coding upstream 68028 19198520 ~ 19204699 (+)
LOC120562651 tyrobp coding upstream 77921 19193475 ~ 19194806 (+)
LOC120563155 NA coding downstream 1799 19278315 ~ 19280622 (+)
rxrbb LOC104965568,LOC103368225,LOC101470553,LOC100711502 coding downstream 52434 19328950 ~ 19339714 (+)
slc6a19b LOC104965566 coding downstream 158174 19434690 ~ 19440233 (+)
LOC120561621 LOC105018833 coding downstream 164321 19440837 ~ 19446117 (+)
LOC120562733 LOC100705529,LOC103366949,LOC102296000 coding downstream 183039 19459555 ~ 19477316 (+)
LOC120562631 fxyd7,LOC103388498 non-coding upstream 109923 19159464 ~ 19162804 (+)
LOC120562629 NA non-coding upstream 113709 19158475 ~ 19159018 (+)
LOC120562630 NA non-coding upstream 114358 19148521 ~ 19158369 (+)
G73568 NA non-coding upstream 146879 19125156 ~ 19125848 (+)
G73501 aplp1 non-coding upstream 340554 18911394 ~ 18932173 (+)
G73606 NA non-coding downstream 42922 19319438 ~ 19320048 (+)
LOC120562732 NA non-coding downstream 177253 19453769 ~ 19456616 (+)
LOC120562701 NA non-coding downstream 337987 19614503 ~ 19625611 (+)
G73776 hdac9 non-coding downstream 358357 19634873 ~ 19639459 (+)
G73836 NA non-coding downstream 543719 19820235 ~ 19820591 (+)
hcst LOC104925504,LOC104961397 other upstream 80625 19190020 ~ 19192102 (+)
G73570 LOC103371659 other upstream 113732 19148613 ~ 19158995 (+)
kmt2bb kmt2b other upstream 410769 18833245 ~ 18861958 (+)
proser3 NA other upstream 444039 18819201 ~ 18828688 (+)
LOC120562824 NA other upstream 526052 18744662 ~ 18746675 (+)
si:ch211-254p10.2 LOC102209663,LOC101158134,LOC102295699,LOC101064473 other downstream 170651 19447167 ~ 19453283 (+)
G73779 hdac9 other downstream 370459 19646975 ~ 19649511 (+)
LOC120561838 tppp other downstream 916174 20192690 ~ 20209327 (+)
si:ch211-257p13.3 kifc3,LOC102783047 other downstream 938072 20214588 ~ 20226991 (+)
gra NA other downstream 1045814 20322330 ~ 20325961 (+)

Expression


Co-expression Network