XLOC_004632 (tmem130)


Basic Information

Item Value
gene id XLOC_004632
gene name tmem130
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 17865374 ~ 17875270 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00009174
tttGTTACTTGTATTGCATTACCATCAGCACTGTCCAAGACTCCTAGACctgattttacataaagctgGCAGAGGCATATACAGTCATATGTGAATTGAATATGACCAGGGGGTCCTATCCCCAATAGTAATAGGCTGAGTGTGTTTGTGGTGTCTGCTTTTACTTCAGTGTGTTCCATTGTGTTAGATGCAGAACTCAAATTCGGAGTATAGGACAACAATCAATACTTTcttttgtatatatacagtacataactACTTtccttatataaatatatatttgttaagaATAAAAAGTGCAACCTTTAGAACTCCAACATTCCAACAACCTTGGGGATTCAGAATAGGGCCATACATTGATTGCTATGGTATATGTAGACTGAGTTCTTGCAACCAGAAAAAGTCAACTCATTGCCATATTTGAGCCAAGATAAAGTATTGTGAAGCGCATCACTAGGCCAAACAGATCTTGATATATAAGTAGATTATTTAACAGTCTGGGATTTAATGTAGCCATTTCTTGCATGTCCTCTTGGAAAGCCATTCAGAAGCCTTTAGCGAAATGGGTTTGTGAATTAGTCACATCTCTGCATGAATTATATTTGCCGTGACAGCACAACACATATCATTATTCATATGAGCATAAGGTTTCAACACGTGAACATGATTTCAAGCCTTTACCAAACAACATGAAAGACTTAAAATGCTCACTCAGTCACACTCGAGTCACAAGCTGTTTATTTGGAGATCTGTGCTGAAGAGTCCACATGGACTGGATCCGGAGTGTTCTGGTTCACACCTTTCTCTCACTGATTTCCTCTCTTGCCTTTGGGATACCAGAAGAATCCCCTCATCATCAGTTATCTGGAAATGTCAAAGGAAAGCTTATTTTCCATCAGATGGAAGGGAATTCAACATACTTGCGCAAAACAGGGAATCTGGCATCTTACACTAAAACAGTGGTTTCATTTGAACTCTATGACCCGAGGCATATCCTGCGCTCTGTCTCTTTTACATACACATGGGATTTGGGCAATGGGGAAGTGCATAAAGGCCCAGAGCCTTTTGTGAAGTTTTACTACGCCTTACCAGGGAACTACACGTTAAAACTGAGCATTGAAACAGATGCACCTCAGCATTCCAGGATGACAGGCCTGTACTCGGTAGATCTGACTGTATTAGATGCTATTAGATACGTTGATCTGATAGGACCTGTGATTTATAACGTCGACCAAAACAGCAGACTGTCCTTTGAGGTTGGAGGAAGCCCTCCGGTTTGGCTGTGCTGGAGAGTTTTGCCTGATTGCCACACACCCAATCCAGCTTCCTGCAGTTTAGTCCAGATCTATGAAAACACTTTCTGTCTGAACTACACTTTCACATCTGTAGGAACGCACTGCTTAGACCTGAGTGTGAAAAATAACATCAGCAGCCTCCAGACATTCTACAGCATCTATGTGCAAAGCGGTCATGTAAGTCTCTTCTTCCTATTGCCCTGCGCTGCAGTGATTGTTGCGACCCTCATATTTATCTTTGTGACCGTGTGTCGTCCACGCCAGCGGTCTCTCATGTGTAAGGGAGATTATGTCTCCTTCACAGACATCGAACTGCGTGCAAAGGATGCCACCGTCCCTTTGCAGAGCAATTCTTCTGCATCTAAGACAAATGAAACCCAGCTTCTGCTTTATCAGCAAGGGCCTTCCTACAACCCAGAATCCTGTTAGTCTCACACAAGATGTATTCATTAAAACAGATCTTTCATTGCATTATTTTGCTGTATGGTCTAACTTTTTATATTTGACACAAACAAGCATTGTGAATAAACACAAAATAGAACCTCTAAAAGCTTTTCACTTAGCTCATCTGAGTCACTCTGTCAATATGAACACATTCATGCTCCTTCTGCtctttttgtttacatttgaaaAGGTTTCAGGGTTTGATTCATGCAGGCTGCATTTGCTAATGTGAGAATTGTTTTTagattttgggttttttttttttaattgtctaatgaatacagaaaacatccaaaaagcacttttatgtgtttttttgtctGAGCCATACATCTCCATTTCAGCAGTACTTACATACACCAAACAGTTGTATTTAGTATTTGGTAGGTAGTTACaggatgtacactgtaaaaaatgtccagAATTTTacaacatgttactgtaatttttcacagtaaagtTTCACAGTAATGTGTTGTATTCAaagttttattgtgaaattatggCAGGTTGCATGGTTACAGCAGATTACTgtaaaaagggctatatcttttgcatgtTATTTATAGGAAGTCAAACTCTTTTGATTTCATTTAGCATAGATATTAACACAAATGAACTTTAATGCCAGTGTTGGCACTTTTTGGATATTTAGAAATAACATAATGTTATTGCAGCTCCAAAAACAATTTGGTTACATcttcaaaaataactttaaaagatAAAATCATCCTGTTTTGAAACGACATGAATGTCATAGTAAATTGAATTTGGTAAATTTTGCTATGTAAATTTAAATTGGGTGCACTCCACCTTTATTTAGTTTTCTAAGGTTAACATGGGaatgttaatacattttaatgaacataactttgCCCTTAgctaaaaacataataaactggaacaaaagtaaatgatttataaagccaaacactgttaaacacccaaaatgacTT

Function

symbol description
tmem130 Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human TMEM130 (transmembrane protein 130).

GO:

id name namespace
GO:0005887 integral component of plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-080204-23 Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human TMEM130 (transmembrane protein 130).

Ensembl:

ensembl_id ENSDARG00000103789

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00009174 True 2695 mRNA 0.38 8 17865374 17875270

Neighbor

gene id symbol gene type direction distance location
XLOC_004631 bhlha15 coding upstream 108469 17754859 ~ 17756905 (+)
XLOC_004630 CR932017.1 coding upstream 125918 17701625 ~ 17739456 (+)
XLOC_004629 rsph10b coding upstream 231647 17620067 ~ 17633727 (+)
XLOC_004628 pms2 coding upstream 245850 17603528 ~ 17619524 (+)
XLOC_004627 cyth3a coding upstream 302671 17504559 ~ 17562703 (+)
XLOC_004633 trrap coding downstream 52601 17927871 ~ 18105116 (+)
XLOC_004634 BX005075.1 coding downstream 250388 18125658 ~ 18125774 (+)
XLOC_004635 NA coding downstream 334601 18209871 ~ 18228004 (+)
XLOC_004636 fam20cb coding downstream 359287 18234557 ~ 18343653 (+)
XLOC_004637 FOXL3 coding downstream 482812 18358082 ~ 18362422 (+)
XLOC_004625 NA non-coding upstream 437994 17424431 ~ 17427380 (+)
XLOC_004624 AL731788.1 non-coding upstream 519707 17345550 ~ 17345667 (+)
XLOC_004618 dre-mir-107a non-coding upstream 904593 16960693 ~ 16960781 (+)
XLOC_004615 NA non-coding upstream 990671 16742395 ~ 16874703 (+)
XLOC_004614 NA non-coding upstream 1280320 16583373 ~ 16585054 (+)
XLOC_004644 AL772266.2 non-coding downstream 723580 18598850 ~ 18598964 (+)
XLOC_004648 NA non-coding downstream 986008 18861278 ~ 18867975 (+)
XLOC_004660 NA non-coding downstream 1392489 19267759 ~ 19271156 (+)

Expression


Co-expression Network