LOC120561838 (tppp)


Basic Information

Item Value
gene id LOC120561838
gene name tppp
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 20192690 ~ 20209327 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU98936
ATTTGATTTGTAGTTTCAATGAGAATTAGCTAATTTTTGACACGTTTTTTGAAATCTTAAATGGCTCCATTCTTCATTGTTGTCTGTCTGCCATCCCCACTTGTCAACTGTTATTAAGTCTTAAAAAATCTGCTGTTAATTTTTTTGTAAGCTCACACTGTCATTTTAAGAATTTGCCTTCAGCTCAAACCAAGAAAATATATTAAGGGTTTTGTCAACTtgtattcatgtttttgttgcaaAATGCAGCATAGTTAACGTTAGactgaacattttttttacctctgtGATATCTTCTTACTTTTGTGAAtatgtaaaacataaaaattcCTACCACGTAAACCTTTTAAATATGCCTGcttataacaaaaaaatacaataggAGTCTTGGAGAATCTATTTTCTCCTACAATGTTGTTATTCAGACCACAAACCATTTTGCTAACATGCATTTTGAATTTTAAGTTGTTGAAATTCAGCTGAAGGAAGCTCTAACCATAGTAGATGAGCTCAGTTGTACAAGattgtatttttaacattttactaTTTCCTCATGATTTCTATACAGTAGTTCTAATATATTTGTGGTGAGATTGTGTATATTCTAAAATCTTATAGCCCCATGGCTTAATTTATGACACTGGCttcatatgttgtttttatgtattgCTGTACTTTGTGCATGTTTATGTATATTGCATTTGATTCAGAAGCATATAGATGACAGTAGGAGTTTGTCATATCTTATCTGAGCTGCTGTGAGGACAGACTACTGGACAGACTTAAATATtttcttgcaaaaaaaaaaaaaaaaaaagtgtaagtgTAAGTGATGGAATTGCAGGATCATGATGAAATCTTGTATTGCTTGAAATCAATATGTATCAACTTGTACATACAAAGTCAGCTATGCTCCAATGCTATTATTATAGTTGTCTGTTGGTAAAGATTTAGAGTACCTTTTATGTGTGCTACTGTCATCCAAGGCACAAATTCAACTGAAAACAGAAGCAGGGTTTTACTGTTGTATCCTTACAAATTAGATAAAGGGAAAATTGCAAAGAAGTAATATTTTGTAGAATATTTTTCCAACATAGTGACAGTGTCACACACTACCTGTAGCGTCAGCTGATGAAGAATCATGCATCAAGTGCAAAACTCGCAGCTATCAGTGTGTTAGTTTTCATTTGCTGCAGTAGCTTGATCTGTTCTCTGTGCTTAATGCCAAATACTGTGCACCTTTAATGTGGAGGAACATATGgtcttatttgttttttttcaaataacttTTAATGTACTATTGTGCCCTGGTGCATGCAGTGTGTTCTTGTTCTTTACACCTCTTAATGTGTGTTCATGATTTGTAGTGCAttactgaaaaataaaaacaaagtataGGGtgtcagtcaaaacacaatgtttTAAGTTATTATGACTGTGAAACTCCCCACCACAGCCCTGTAACATTCACATAAAAACAA
>XM_039805128.1
AGCTTTGGCCCAGTACCACTGTCTCCCACACGTGTCTGAGATAGAGAATGTGCCAAAATGTGTGCGAGGTCGCGGTGAGAGAATTGATCGTTTCTTCTAAGTCTCCGCCTCTCAAAGCACCAAAAAGATGCAACGTGCTCCAACCGCTTGTTTTTATCAGCGCTCCACTAAACACTGTGGCACCATCACCGAGGCACGAAGCAAACAGCTCGTCGCACACggcagcagccaatcagcggGCTGGTTTCTCTTCAGCATCTCGGAGGGACTGAACACTCTGTCAAACTCAGCTCAGGCAGCAGGCAGGAAAGGGATTTCAAGACTCCGCGACGCGCAATTATGGTTTTGTGAACTTGACAAGGAGGTGGAGGATTGCATCACCAGcacaaagagaaaacaaaagtcaGCTAATCCAAGCACTGCACAGAAGGAACCAAATTCCTGCACAAGCATGGCAAACCAGAAAGACAACATAGACGACTTTAAAGTCCAGACAGCCAAGCATCCTAACATGGGCTCGGCCCCTTTACGGCCGCACAGTGAACAGTCTAAAGACCGGTTGTCCAAGAGGCTTTCAACTGAGTCTAATGGGACCAGTGAAGGAGGTGTGGGCTCGTCCACACCAGTGGAGGTGACTGCTTTGGAGGAGTCTTTTCGCCGCTTCGCTATCCACGGTGACACTCGCGCTACCGGCAAGGACATGCACGGAAAGAACTGGTCCAAGCTCTGCAAGGACTGTGGCGTGATTGACGGCAAGAACATCACCCTCACTGATGTGGACATCGTCTTCAGCAAAGTCAAGAAGAAATCCTGTCGCACCATCACATACGACGAGTTCAAGATTGCACTTGGAGAGCTGGCCAGGAAGAAATATAAAGAAAGGACTGGAGAGGAGGCTGAGGCCGAGGTCTTCAAACTGATTGAGGGGAAGACACCTGTCATTGCAGGAGTCACGAGAGCCGTGGCGTCCCCAACAGTGAGCCGTCTTACGGACCCCACCAAGTTTACAGGGTCACACAAGGAGCGTTTTGATGACACTGGTCGCGGGAAGGGTAAGGCAGGACGAGTGGATATGGTTGACACTTCTGGATACGTCTCGGGGTACAAACATCGAGGGACATAtgaaaagaaagtgaataaataaACCTTACCgtgggcaaactcatgtgagGGCGAGGATAAGGAAATAGACATTTGATCAACTACTATGATACTTTTCTATTAAGAGTACTCAAAGAAAGCACAAAAAAATAGCATTTCATATATTTTTCCCAGCcatcaattgtgtgtgtgtgtgtgtgagagagaggtttTTGAGTTCCTCTCTTTTAGAAGTGTGAGAACTGGAAAACTGTTTACATCTATTTTTACAAAGTCATCACCAGCTGGTACATTCCTGTCTGATAGCAAGTTACTGCCAAACACTGAAGCGAACAAACGAGAGAAAACTGCTATGCTATGAATACTGAAGCTTTGTTGTAATGATAGGGCCTTATATTTATTGAGCACAATGAACAACATGCCAAGAAAAACAGGCGTGGGACAACAGTTTGATGAATTAACGTTGCACTTTTTAATGGAAACTTTTTGaatcccatatatatatatatatatatatatatatatatatatatatatatatatatatatatatgagtgtaTATTTGATTTGTAGTTTCAATGAGAATTAGCTAATTTTTGACACGTTTTTTGAAATCTTAAATGGCTCCATTCTTCATTGTTGTCTGTCTGCCATCCCCACTTGTCAACTGTTATTAAGTCTTAAAAAATCTGCTGTTAATTTTTTTGTAAGCTCACACTGTCATTTTAAGAATTTGCCTTCAGCTCAAACCAAGAAAATATATTAAGGGTTTTGTCAACTtgtattcatgtttttgttgcaaAATGCAGCATAGTTAACGTTAGactgaacattttttttacctctgtGATATCTTCTTACTTTTGTGAAtatgtaaaacataaaaattcCTACCACGTAAACCTTTTAAATATGCCTGcttataacaaaaaaatacaataggAGTCTTGGAGAATCTATTTTCTCCTACAATGTTGTTATTCAGACCACAAACCATTTTGCTAACATGCATTTTGAATTTTAAGTTGTTGAAATTCAGCTGAAGGAAGCTCTAACCATAGTAGATGAGCTCAGTTGTACAAGattgtatttttaacattttactaTTTCCTCATGATTTCTATACAGTAGTTCTAATATATTTGTGGTGAGATTGTGTATATTCTAAAATCTTATAGCCCCATGGCTTAATTTATGACACTGGCttcatatgttgtttttatgtattgCTGTACTTTGTGCATGTTTATGTATATTGCATTTGATTCAGAAGCATATAGATGACAGTAGGAGTTTGTCATATCTTATCTGAGCTGCTGTGAGGACAGACTACTGGACAGACTTAAATATtttcttgcaaaaaaaaaaaaaaaaaaagtgtaagtgTAAGTGATGGAATTGCAGGATCATGATGAAATCTTGTATTGCTTGAAATCAATATGTATCAACTTGTACATACAAAGTCAGCTATGCTCCAATGCTATTATTATAGTTGTCTGTTGGTAAAGATTTAGAGTACCTTTTATGTGTGCTACTGTCATCCAAGGCACAAATTCAACTGAAAACAGAAGCAGGGTTTTACTGTTGTATCCTTACAAATTAGATAAAGGGAAAATTGCAAAGAAGTAATATTTTGTAGAATATTTTTCCAACATAGTGACAGTGTCACACACTACCTGTAGCGTCAGCTGATGAAGAATCATGCATCAAGTGCAAAACTCGCAGCTATCAGTGTGTTAGTTTTCATTTGCTGCAGTAGCTTGATCTGTTCTCTGTGCTTAATGCCAAATACTGTGCACCTTTAATGTGGAGGAACATATGgtcttatttgttttttttcaaataacttTTAATGTACTATTGTGCCCTGGTGCATGCAGTGTGTTCTTGTTCTTTACACCTCTTAATGTGTGTTCATGATTTGTAGTGCAttactgaaaaataaaaacaaagtataGGGtgtcagtcaaaaca

Function

symbol description
tppp Enables several functions, including GTPase activity; magnesium ion binding activity; and protein homodimerization activity. Involved in several processes, including microtubule cytoskeleton organization; negative regulation of tubulin deacetylation; and positive regulation of protein polymerization. Located in several cellular components, including mitochondrion; mitotic spindle; and perinuclear region of cytoplasm. Colocalizes with microtubule and microtubule bundle.

NR:

description
tubulin polymerization-promoting protein isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98936 False 1481 lncRNA 0.33 1 20207847 20209327
XM_039805128.1 True 3076 mRNA 0.40 6 20192690 20209260

Neighbor

gene id symbol gene type direction distance location
zdhhc11 NA coding upstream 8195 20178584 ~ 20184495 (+)
brd9 brd9 coding upstream 14565 20170616 ~ 20178125 (+)
si:ch211-269k10.4 NA coding upstream 99382 20088865 ~ 20093308 (+)
gsdmeb NA coding upstream 203943 19978757 ~ 19988747 (+)
osbpl3b osbpl3,LOC102198167 coding upstream 215696 19947456 ~ 19976994 (+)
nbeal2 nbeal2 coding downstream 32277 20241604 ~ 20275511 (+)
nradd LOC104940332,LOC103360043 coding downstream 69166 20278493 ~ 20287448 (+)
rbm12bb LOC104957629 coding downstream 104948 20314275 ~ 20321879 (+)
upp1 upp1,LOC104968262,LOC104940328 coding downstream 117619 20326946 ~ 20331729 (+)
stmn2a LOC104940327,LOC104968264,LOC102210154,LOC106906614,LOC106939818,LOC100696657,LOC101077630 coding downstream 123926 20333253 ~ 20337594 (+)
G73871 NA non-coding upstream 140684 20019109 ~ 20052006 (+)
G73881 NA non-coding upstream 146310 20040871 ~ 20046380 (+)
G73836 NA non-coding upstream 372099 19820235 ~ 19820591 (+)
G73776 hdac9 non-coding upstream 553231 19634873 ~ 19639459 (+)
LOC120562701 NA non-coding upstream 567079 19614503 ~ 19625611 (+)
G74067 NA non-coding downstream 105157 20314484 ~ 20318117 (+)
G74081 NA non-coding downstream 131014 20340341 ~ 20340927 (+)
G74091 NA non-coding downstream 193496 20402823 ~ 20423897 (+)
G74116 NA non-coding downstream 266837 20476164 ~ 20476367 (+)
G74119 NA non-coding downstream 275383 20484710 ~ 20484943 (+)
G73779 hdac9 other upstream 543179 19646975 ~ 19649511 (+)
si:ch211-254p10.2 LOC102209663,LOC101158134,LOC102295699,LOC101064473 other upstream 739407 19447167 ~ 19453283 (+)
hcst LOC104925504,LOC104961397 other upstream 1000588 19190020 ~ 19192102 (+)
G73570 LOC103371659 other upstream 1033695 19148613 ~ 19158995 (+)
kmt2bb kmt2b other upstream 1330732 18833245 ~ 18861958 (+)
si:ch211-257p13.3 kifc3,LOC102783047 other downstream 5261 20214588 ~ 20226991 (+)
gra NA other downstream 113003 20322330 ~ 20325961 (+)
glipr2l glipr2 other downstream 390996 20600323 ~ 20605165 (+)
sec61b sec61b,LOC102796100 other downstream 798686 21008013 ~ 21011414 (+)
LOC120563169 NA other downstream 1122085 21331412 ~ 21336665 (+)

Expression


Co-expression Network