gra


Basic Information

Item Value
gene id gra
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 20322330 ~ 20325961 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU99041
GGATGTGATGACACCATAGGATGACACCGGCAGGCGATCCTCCAACGCCAATAAAcatagtagaagaagaagaagttaagCAGACAGAATATCACGCCGAGGGAACTTTTTGAAACAGATGGAGGTATCAAGAAGAAGGATCCTCCAAAAACATCTGGAGCCTGCAAGACCCCTGCGCCGCTGCATTCATGTTGACAGTGAGCCCATAATAAATGCTGCTACATGTGGACAGGCActgatggaggaagaggatgaagagGCAAATATTGGCATAGAGCAGTTCTACAGGATTGTCAACCTCCACAAACAGAAAGAAGAGAGATCTTGGGCACCTAAGGCTTCATGAAATGAGATGGAATGGGGGAAAAGAAGACATggACGAAGAAAGGCTTCACTCGCCTTAAGACATTTGCACAGGTGTTCACTTCCcaaagagtgttttttttttttttttgctgagaaATTAGTGAATTTAATTTAACTTGTGACATTTAAATTTGCATGTTATATTTGTTTGAGATTGATAACAGTTTGCAGTGAAATTGCACAAAGTAATAATACTAAACACCACTTATGTGCTTAAGTATGAGTATTGCATGTTTACATTTTCTACTGTAAGATTTTGGCTGGAGTGAAGTATTtaaattttgtaaaaaataaacctAGACATAAGAACATTAACGGCTGTTCGTCAGATGTGGTGGTAATGTTTTGCTTAAAGAAACTGGGTAATGCAGACTCATCATCACTTATATTAGTCATAAAACAAACCCTACCTGCAGTGACAGCGGTCAAAATGATGTTTGTCATCAGCTGTATTAGCTGGGATTACATCAGAATTGTAATTTAAC
>XM_039806785.1
GTTCGAACGTATGCATGTCATCTAATCGCTTcacgttttattttgtttcgtTAATGTTATAATGCGAGATCATATACAATCGTTAGACGCAGTCCCGACCGTTAAATAAACGGATTCGTAAAACAACCGCTTATGATGCACCGTTATCATACAGACCATGGTAACACAGATGTCTGCCATGGACACTGATGGGCAACAAGAATGTTCCCAGTAACGTTACCTGGTTGGTTTCCAAAGTTGCTTCTTTCATGAAGATGGAGGTATCAAGAAGAAGGATCCTCCAAAAACATCTGGAGCCTGCAAGACCCCTGCGCCGCTGCATTCATGTTGACAGTGAGCCCATAATAAATGCTGCTACATGTGGACAGGCActgatggaggaagaggatgaagagGCAAATATTGGCATAGAGCAGTTCTACAGGATTGTCAACCTCCACAAACAGAAAGAAGGCAGAATATCTTACACAAGAGAATTTTTAATTGGTCTGGCAAGTTCTCCTGAGGCCAGGAAGAAACCGAAATTCTTGCCAGAGCACCCCATAGTGCTAATGGAGGCAAGAGATCTTGGGCACCTAAGGCTTCATGAAATGAGATGGAATGGGGGAAAAGAAGACATggACGAAGAAAGGCTTCACTCGCCTTAAGACATTTGCACAGGTGTTCACTTCCcaaagagtgttttttttttttttttgctgagaaATTAGTGAATTTAATTTAACTTGTGACATTTAAATTTGCATGTTATATTTGTTTGAGATTGATAACAGTTTGCAGTGAAATTGCACAAAGTAATAATACTAAACACCACTTATGTGCTTAAGTATGAGTATTGCATGTTTACATTTTCTACTGTAAGATTTTGGCTGGAGTGAAGTATTtaaattttgtaaaaaataaacctAGACATAAGAACATTAACGGCTGTTCGTCAGATGTGGTGGTAATGTTTTGCTTAAAGAAACTGGGTAATGCAGACTCATCATCACTTATATTAGTCATAAAACAAACCCTACCTGCAGTGACAGCGGTCAAAATGATGTTTGTCATCAGCTGTATTAGCTGGGATTACATCAGAATTGTAATTTAACGTGTCTTACTAAATATGTTAACTTCTCTTATAAAGGAAAGTTTGACCAAACAa

Function

NR:

description
uncharacterized protein C8orf88-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99041 False 851 lncRNA 0.39 6 20322330 20325908
XM_039806785.1 True 1147 mRNA 0.39 7 20322572 20325961

Neighbor

gene id symbol gene type direction distance location
rbm12bb LOC104957629 coding upstream 451 20314275 ~ 20321879 (+)
nradd LOC104940332,LOC103360043 coding upstream 34882 20278493 ~ 20287448 (+)
nbeal2 nbeal2 coding upstream 46819 20241604 ~ 20275511 (+)
zdhhc11 NA coding upstream 137835 20178584 ~ 20184495 (+)
brd9 brd9 coding upstream 144205 20170616 ~ 20178125 (+)
upp1 upp1,LOC104968262,LOC104940328 coding downstream 985 20326946 ~ 20331729 (+)
stmn2a LOC104940327,LOC104968264,LOC102210154,LOC106906614,LOC106939818,LOC100696657,LOC101077630 coding downstream 7292 20333253 ~ 20337594 (+)
fabp4b LOC104968266 coding downstream 25018 20350979 ~ 20352241 (+)
LOC120562869 LOC104968268,LOC100690679,LOC103353894 coding downstream 26416 20352377 ~ 20358197 (+)
LOC120562868 LOC100690947,LOC102779295,LOC104968267,LOC102211038,LOC101468916 coding downstream 42143 20368104 ~ 20380083 (+)
G74067 NA non-coding upstream 4213 20314484 ~ 20318117 (+)
G73871 NA non-coding upstream 270324 20019109 ~ 20052006 (+)
G73881 NA non-coding upstream 275950 20040871 ~ 20046380 (+)
G73836 NA non-coding upstream 501739 19820235 ~ 19820591 (+)
G73776 hdac9 non-coding upstream 682871 19634873 ~ 19639459 (+)
G74081 NA non-coding downstream 14380 20340341 ~ 20340927 (+)
G74091 NA non-coding downstream 76862 20402823 ~ 20423897 (+)
G74116 NA non-coding downstream 150203 20476164 ~ 20476367 (+)
G74119 NA non-coding downstream 158749 20484710 ~ 20484943 (+)
G74121 NA non-coding downstream 182772 20508733 ~ 20520082 (+)
si:ch211-257p13.3 kifc3,LOC102783047 other upstream 95339 20214588 ~ 20226991 (+)
LOC120561838 tppp other upstream 113003 20192690 ~ 20209327 (+)
G73779 hdac9 other upstream 672819 19646975 ~ 19649511 (+)
si:ch211-254p10.2 LOC102209663,LOC101158134,LOC102295699,LOC101064473 other upstream 869047 19447167 ~ 19453283 (+)
hcst LOC104925504,LOC104961397 other upstream 1130228 19190020 ~ 19192102 (+)
glipr2l glipr2 other downstream 274362 20600323 ~ 20605165 (+)
sec61b sec61b,LOC102796100 other downstream 682052 21008013 ~ 21011414 (+)
LOC120563169 NA other downstream 1005451 21331412 ~ 21336665 (+)
crot acbd7,crot,LOC102783617,LOC101470173 other downstream 1077074 21403035 ~ 21415894 (+)
them4 LOC106592246,LOC104959154,LOC101466288,LOC107096308,LOC100702377,LOC105029233,LOC106575342 other downstream 1273073 21599034 ~ 21603458 (+)

Expression


Co-expression Network