G74633 (tuft1,LOC102781808)


Basic Information

Item Value
gene id G74633
gene name tuft1,LOC102781808
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 21769548 ~ 21770286 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU99801
CCTCACTTCCACTTAACCCGGACCCTTTATTCTCAATTCCACTGAAAACccatacaattactttttatagGAGAAGACAATAAGCAGCACTTGTACCTCAGCCTCCAAGAAAGCCACTTTCTCCTCCAGCTCTTTGATCACACGGTCCCTCTCTTGGATCACCATGCGAGAGTTCTGGAGCTGTTCAATCATGTGTCTGACTTTCCTTTGTTGGCTTTTTAGCATGTCATCCAGATGGTGGATCTTTTCTTTGAGAATAGCCACCTCCTTTTCCAATTGCTCAGCcCTCTGATCCCCTTTCTGGCCCTCCTCTCTGATCTTGCGCAGTTCGCGCAGTTCGTCCTCGCGGTTGCGTATTGCCTCCCGCAGGCTGGCGCTCTCCTGCTCCATCCCTCCCAGCAACCTCTGGAGCTCGTCGATGCGCTTGTCTTTCCTCTCGCTGGCTTCCTCGGTGACCTTCAACTTCTCCTCCTCGTCGCTCAGATGCTGCCTCAGCCTGCTGCCTTCAGCCTGGAAGAgacacgcaaaaaa

Function

symbol description
tuft1 Predicted to be involved in intracellular signal transduction. Located in cytoplasm.

NR:

description
PREDICTED: tuftelin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99801 True 531 TUCP 0.52 3 21769548 21770286

Neighbor

gene id symbol gene type direction distance location
c7h1orf43 LOC104934460,LOC104959162,LOC103388199 coding upstream 1695 21764475 ~ 21767853 (+)
znf687a NA coding upstream 90690 21668490 ~ 21678858 (+)
LOC120563136 LOC103361607,LOC104959159 coding upstream 101717 21661202 ~ 21667831 (+)
LOC120561789 LOC103361609,LOC102785646,LOC102208248,LOC101464829,LOC100701476,LOC103478143,LOC106937891,LOC106916277 coding upstream 111018 21639092 ~ 21658530 (+)
LOC120561791 NA coding upstream 130808 21628731 ~ 21638740 (+)
she LOC101483326,LOC102307252,LOC102202678 coding downstream 34788 21805074 ~ 21818222 (+)
chrnb2 chrnb2,LOC102780733,LOC104959165 coding downstream 47767 21818053 ~ 21835351 (+)
flad1 flad1,LOC102778463 coding downstream 120243 21890529 ~ 21900652 (+)
efna3b efna3,LOC105928532,LOC103478166,LOC103140801,LOC102234981 coding downstream 204906 21975192 ~ 22033267 (+)
efna1b efna1,LOC104918192 coding downstream 298720 22069006 ~ 22080302 (+)
LOC120562851 NA non-coding upstream 43843 21724948 ~ 21725705 (+)
G74288 NA non-coding upstream 477168 21291042 ~ 21292380 (+)
G74287 NA non-coding upstream 479234 21289553 ~ 21290314 (+)
G74286 NA non-coding upstream 480173 21289171 ~ 21289375 (+)
G74274 kiaa1429,LOC104941925 non-coding upstream 525981 21243229 ~ 21243567 (+)
G74673 NA non-coding downstream 265992 22036278 ~ 22036659 (+)
G74729 NA non-coding downstream 345330 22115616 ~ 22116026 (+)
G74732 NA non-coding downstream 349452 22119738 ~ 22121346 (+)
G74737 NA non-coding downstream 359366 22129652 ~ 22129914 (+)
G74760 NA non-coding downstream 413497 22183783 ~ 22184037 (+)
them4 LOC106592246,LOC104959154,LOC101466288,LOC107096308,LOC100702377,LOC105029233,LOC106575342 other upstream 166090 21599034 ~ 21603458 (+)
crot acbd7,crot,LOC102783617,LOC101470173 other upstream 353654 21403035 ~ 21415894 (+)
LOC120563169 NA other upstream 432883 21331412 ~ 21336665 (+)
sec61b sec61b,LOC102796100 other upstream 758134 21008013 ~ 21011414 (+)
glipr2l glipr2 other upstream 1164383 20600323 ~ 20605165 (+)
slc50a1 slc50a1 other downstream 313383 22083669 ~ 22091963 (+)
LOC120561539 NA other downstream 362292 22132578 ~ 22136234 (+)
LOC120561537 NA other downstream 367261 22137547 ~ 22139223 (+)
snx27b snx27,LOC102196713,LOC102288812 other downstream 369494 22139780 ~ 22154684 (+)
kcnn3 kcnn3,LOC104958859,LOC106930148,LOC106962094 other downstream 427426 22197712 ~ 22248527 (+)

Expression


Co-expression Network