G74732


Basic Information

Item Value
gene id G74732
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 22119738 ~ 22121346 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU99938
tagaaaattttacatgggggggcaaaggggtagcgagagatcttggtagggtggcaggggaagacggtacatggaaacctcatacataaactgatatgccctactacgccccgcaacgccctgctatgccctaaactgctacgccctaaactgctacaactattatttctattcatagttccattatcttttttgttactataattaccattattatgaatcataattctctatatctgtagcCATCTGTATCTAACCAGcgaccaccaagaccctggatatgtctgatgtttctgttgcaccaaatgcttgctcttgggagaattgttgggtcattgtaagttaaagagtgtggtctagacctactctatctgtaaagtgtcttgagaagagtgaactgttgttgtatatgtaaatatttacatatctaaccctataacatatacaacagaatggaaatagccaaaaactgaaaacacatcatgtcacaggacatgttatgttactgtactgcaatttatatggaaggagaatataaaccaaccatatggtccaggggtaactgcagcctcctcttcctctctgtcatcttcatcctcctgatcactctctgcctctgtccctctctctgaacctgcagcctcctcttcatccctcactgtcaattcttcctttccctcttctctttcactcatttctgcatctccttctgtggtcttctcctgctctgacctgcctggtctctccagtttactgtcttctccttcttcatttccctcctcctcttcctcctgtgcactactcaggattttcttggctggcaatatccccacttttaggcttcagctaatctctccagctactctggcctgcaacagtcaagatgtgaaaagcttgttattcttgtattacattatactgtatggccctgtagctaataagtagcctaaaaaacataacatcagacgagatttattacatgcacacatcagttatgtttagactagccttcttaatcctgttgtatttgttgttttcccagtttgacagtaaaggatgttgcctggtttaatttgtgcagccgtattgccgtgatatgtgagaggaagtggattttatagtagcctactccttaactaatcacacacacatgatcggtctcagcaagctctgtgtagtgtgttgtaacgtaacgccaccgaaacggcgaccctctgtaaacgttatgaattcaaacatgccagtttgtaatattctgtattatgctcttcttgtctttactgaaatcaaactaatcaaacagcagaatgcgCTTACAACCCACGAGGGAgcgatttgacttttggctaacagacgcgctgttgttgatactgactcgcctttagcagacattataattattacaaatttaactttagatgaaacgtgtgttttaacttcacctgggaaaacagacttcactttgagaggctcggggaggggcagctcagtcgctccagtctttgccgggatgcagggcccccacaccgcagcagactcgctgtgtgCGTGCCTGAATGTGCGAACGGCgctctgcacgtttgatgcagggacgtagctaagtatttga
>TU99939
tagaaaattttacatgggggggcaaaggggtagcgagagatcttggtagggtggcaggggaagacggtacatggaaacctcatacataaactgatatgccctactacgccccgcaacgccctgctatgccctaaactgctacgccctaaactgctacaactattatttctattcatagttccattatcttttttgttactataattaccattattatgaatcataattctctatatctgtagcCATCTGTATCTAACCAGcgaccaccaagaccctggatatgtctgatgtttctgttgcaccaaatgcttgctcttgggagaattgttgggtcattgtaagttaaagagtgtggtctagacctactctatctgtaaagtgtcttgagaagagtgaactgttgttgtatatgtaaatatttacatatctaaccctataacatatacaacagaatggaaatagccaaaaactgaaaacacatcatgtcacaggacatgttatgttactgtactgcaatttatatggaaggagaatataaaccaaccatatggtccaggggtaactgcagcctcctcttcctctctgtcatcttcatcctcctgatcactctctgcctctgtccctctctctgaacctgcagcctcctcttcatccctcactgtcaattcttcctttccctcttctctttcactcatttctgcatctccttctgtggtcttctcctgctctgacctgcctggtctctccagtttactgtcttctccttcttcatttccctcctcctcttcctcctgtgcactactcaggattttcttggctggcaatatccccacttttaggcttcagctaatctctccagctactctggcctgcaacagtcaagatgtgaaaagcttgttattcttgtattacattatactgtatggccctgtagctaataagtagcctaaaaaacataacatcagacgagatttattacatgcacacatcagttatgtttagactagccttcttaatcctgttgtatttgttgttttcccagtttgacagtaaaggatgttgcctggtttaatttgtgcagccgtattgccgtgatatgtgagaggaagtggattttatagtag

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades
ko04979 Cholesterol metabolism
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU99938 True 1609 lncRNA 0.43 1 22119738 22121346
TU99939 False 1124 lncRNA 0.42 1 22119738 22120861

Neighbor

gene id symbol gene type direction distance location
s100a10b LOC104962190 coding upstream 4178 22114119 ~ 22115560 (+)
krtcap2 krtcap2 coding upstream 6676 22110516 ~ 22113062 (+)
LOC120562069 tmem107 coding upstream 9603 22107943 ~ 22110135 (+)
efna1b efna1,LOC104918192 coding upstream 39436 22069006 ~ 22080302 (+)
efna3b efna3,LOC105928532,LOC103478166,LOC103140801,LOC102234981 coding upstream 86471 21975192 ~ 22033267 (+)
s100w LOC104962188,LOC103388219,LOC106537129,LOC102230839 coding downstream 358 22121704 ~ 22124437 (+)
adar adar coding downstream 46119 22167465 ~ 22183428 (+)
rab13 rab13 coding downstream 151746 22273092 ~ 22278899 (+)
fdps fdps coding downstream 167890 22289236 ~ 22295905 (+)
dap3 dap3 coding downstream 211070 22332416 ~ 22338933 (+)
G74729 NA non-coding upstream 3712 22115616 ~ 22116026 (+)
G74673 NA non-coding upstream 83079 22036278 ~ 22036659 (+)
LOC120562851 NA non-coding upstream 394033 21724948 ~ 21725705 (+)
G74288 NA non-coding upstream 827358 21291042 ~ 21292380 (+)
G74287 NA non-coding upstream 829424 21289553 ~ 21290314 (+)
G74737 NA non-coding downstream 8306 22129652 ~ 22129914 (+)
G74760 NA non-coding downstream 62437 22183783 ~ 22184037 (+)
G74764 NA non-coding downstream 121471 22242817 ~ 22243033 (+)
G74765 NA non-coding downstream 124143 22245489 ~ 22245763 (+)
G74769 NA non-coding downstream 133925 22255271 ~ 22255478 (+)
slc50a1 slc50a1 other upstream 27775 22083669 ~ 22091963 (+)
G74633 tuft1,LOC102781808 other upstream 349452 21769548 ~ 21770286 (+)
them4 LOC106592246,LOC104959154,LOC101466288,LOC107096308,LOC100702377,LOC105029233,LOC106575342 other upstream 516280 21599034 ~ 21603458 (+)
crot acbd7,crot,LOC102783617,LOC101470173 other upstream 703844 21403035 ~ 21415894 (+)
LOC120563169 NA other upstream 783073 21331412 ~ 21336665 (+)
LOC120561539 NA other downstream 11232 22132578 ~ 22136234 (+)
LOC120561537 NA other downstream 16201 22137547 ~ 22139223 (+)
snx27b snx27,LOC102196713,LOC102288812 other downstream 18434 22139780 ~ 22154684 (+)
kcnn3 kcnn3,LOC104958859,LOC106930148,LOC106962094 other downstream 76366 22197712 ~ 22248527 (+)
rusc1 LOC104958857 other downstream 143593 22264939 ~ 22312520 (+)

Expression


Co-expression Network