LOC120561537


Basic Information

Item Value
gene id LOC120561537
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 22137547 ~ 22139223 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU99946
atttgtgtCCGTGCTCTCTTCTCAAACCCCTCTCTTGCACCCTATCTACCTACGCAAGTTCTCATACAAATTTGCCACCATGTCACAGCTCATGCAGGCAATGGATCTCCTCAGGGCTATCTTCGACAAGTACGCTGGAAAAGAAGGAGACAAAGACACTTTGACCAAGAAAGAACTTGCTGAACTGCTCCGCATAGAGTTTTCTGGGGCAGGACCACAAAGCAAAGTTGAAATGGACAAATTCTTCGGCATGTTGGATAATGACGGTGATGGCGTTGTTTCTTTCGAGGAGTATGTCACTTTTGTAGCAGCCATCACTGTGATAAGCACTTCGAAATAAGTATTGGCCACATTGCCTCAGAACTTCGGTGCCTTCTTCAATTTgtcccaaataaaaaaaactgagtaATCCAACTTATTACAGTCACATctataaaatgtacagtacatgtcatTATCACATGTTCAGAAAAGGAAAACTTGGTTAAACACAGATAAATCAAAGATGGGTTATTATGTTGGCTTAAGGGACTTGAAAGATGCTGACTTTGAGTGTGTTTTCACTGATGTTAATTACATAATTGGTGactaataaagaaacaaaaataaatgtt
>XM_039804664.1
CAACCtctatttaaatacatttgtgtCCGTGCTCTCTTCTCAAACCCCTCTCTTGCACCCTATCTACCTACGCAAGTTCTCATACAAATTTGCCACCATGTCACAGCTCATGCAGGCAATGGATCTCCTCAGGGCTATCTTCGACAAGTACGCTGGAAAAGAAGGAGACAAAGACACTTTGACCAAGAAAGAACTTGCTGAACTGCTCCGCATAGAGTTTTCTGGGGCAGGACCACAAAGCAAAGTTGAAATGGACAAATTCTTCGGCATGTTGGATAATGACGGTGATGGCGTTGTTTCTTTCGAGGAGTATGTCACTTTTGTAGCAGCCATCACTGTGATAAGCACTTCGAAATAAGTATTGGCCACATTGCCTCAGAACTTCGGTGCCTTCTTCAATTTgtcccaaataaaaaaaactgagtaATCCAACTTATTACAGTCACATctataaaatgtacagtacatgtcatTATCACATGTTCAGAAAAGGAAAACTTGGTTAAACACAGATAAATCAAAGATGGGTTATTATGTTGGCTTAAGGGACTTGAAAGATGCTGACTTTGAGTGTGTTTTCACTGATGTTAATTACATAATTGGTGactaataaagaaacaaaaataaatgtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99946 False 614 TUCP 0.40 3 22137565 22139223
XM_039804664.1 True 632 mRNA 0.39 3 22137547 22139223

Neighbor

gene id symbol gene type direction distance location
s100w LOC104962188,LOC103388219,LOC106537129,LOC102230839 coding upstream 13110 22121704 ~ 22124437 (+)
s100a10b LOC104962190 coding upstream 21987 22114119 ~ 22115560 (+)
krtcap2 krtcap2 coding upstream 24485 22110516 ~ 22113062 (+)
LOC120562069 tmem107 coding upstream 27412 22107943 ~ 22110135 (+)
efna1b efna1,LOC104918192 coding upstream 57245 22069006 ~ 22080302 (+)
adar adar coding downstream 28242 22167465 ~ 22183428 (+)
rab13 rab13 coding downstream 133869 22273092 ~ 22278899 (+)
fdps fdps coding downstream 150013 22289236 ~ 22295905 (+)
dap3 dap3 coding downstream 193193 22332416 ~ 22338933 (+)
gba gba coding downstream 200406 22339629 ~ 22345550 (+)
G74737 NA non-coding upstream 7633 22129652 ~ 22129914 (+)
G74732 NA non-coding upstream 16201 22119738 ~ 22121346 (+)
G74729 NA non-coding upstream 21521 22115616 ~ 22116026 (+)
G74673 NA non-coding upstream 100888 22036278 ~ 22036659 (+)
LOC120562851 NA non-coding upstream 411842 21724948 ~ 21725705 (+)
G74760 NA non-coding downstream 44560 22183783 ~ 22184037 (+)
G74764 NA non-coding downstream 103594 22242817 ~ 22243033 (+)
G74765 NA non-coding downstream 106266 22245489 ~ 22245763 (+)
G74769 NA non-coding downstream 116048 22255271 ~ 22255478 (+)
G75042 NA non-coding downstream 779529 22918752 ~ 22920103 (+)
LOC120561539 NA other upstream 1313 22132578 ~ 22136234 (+)
slc50a1 slc50a1 other upstream 45584 22083669 ~ 22091963 (+)
G74633 tuft1,LOC102781808 other upstream 367261 21769548 ~ 21770286 (+)
them4 LOC106592246,LOC104959154,LOC101466288,LOC107096308,LOC100702377,LOC105029233,LOC106575342 other upstream 534089 21599034 ~ 21603458 (+)
crot acbd7,crot,LOC102783617,LOC101470173 other upstream 721653 21403035 ~ 21415894 (+)
snx27b snx27,LOC102196713,LOC102288812 other downstream 557 22139780 ~ 22154684 (+)
kcnn3 kcnn3,LOC104958859,LOC106930148,LOC106962094 other downstream 58489 22197712 ~ 22248527 (+)
rusc1 LOC104958857 other downstream 125716 22264939 ~ 22312520 (+)
fam189b fam189b,LOC102796117 other downstream 140333 22279556 ~ 22288294 (+)
rprd2b NA other downstream 330755 22469978 ~ 22489944 (+)

Expression


Co-expression Network