LOC120561566 (LOC108250351)



Basic Information


Item Value
gene id LOC120561566
gene name LOC108250351
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 1034787 ~ 1046899 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039804701.1
catggcTCCACGTGTTGACAGAGGGttcctttgtgttgttttgtgtgtttgtagtctgtcaggctgtctgatctcaaaggaaggctgttcttctctggtctcagctctgagctccaacccctcccatctgagagagctggacctgagctacaatcatccaggagactcaggagtgaagctactGTCAGCGGGACTGAAGGATCctctctggagactggacactctcagggtggagcctgctggagtcagatggttgacaccaggtctgaggaagtattcctgtgaactcacactcgacacaaacacagtggacagaaaactcaaactgtctgacaacgaCAGGAAGGTGATAGCTGTGAAGGAGGATCAGCCATATcttgatcatccagagaggtttgactcctggtggcctcagctgctgtgtagagatggtctgcctggtcgttgttactgggaggttgtGAGGAGTGGAGTGGTTgttatatcagtgagttacagaggaatcagcaggagaggagacattgatgactgtttgtttggatataatgatcagtcctggagtctgagcTGCTCTGATGATGGTTACTCTGTCTGGCACAATAACATAGaaacatccatctcctcctctgtttctgatagagtagcagtgtatgtggactgtcctgctggctctctgtctttctacacagtctcctctgactcactgatccacctctacaccttcaacaccacattcactcaaccTCTTTATCCTGGGTTTGGGTTCTGGTCTCCTGGtgcctcagtgtctctgtgttctgtgtaggacggagagtctcctcctgtttctcactgctgatcaattgagtctgtacaggatcacacttacagaaatatttcaggttattgttatgaactaatgaataaactttgtataaaataattcagaatgattTGAACAGATTCCTCGTGAACATTAAACTTCTTCCACTTCCAgtcctttaaagatggaagctgtgatcatgaaattgTAGAAATGGTGAACTTGTGTCATGTTTTGAATTCGGtcttttttcacaataaaagcataaagttg

Function


NR:

description
PREDICTED: NACHT, LRR and PYD domains-containing protein 14-like, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039804701.1 True 1075 mRNA 0.46 3 1034787 1046899

Neighbor


gene id symbol gene type direction distance location
LOC120562853 laptm4b,LOC103136995,LOC103478192 coding downstream 20276 997602 ~ 1014511 (-)
LOC120561543 matn2,LOC102780797 coding downstream 38557 976511 ~ 996230 (-)
LOC120562727 LOC103364896 coding downstream 58558 965289 ~ 976229 (-)
pop1 pop1 coding downstream 78526 928441 ~ 956261 (-)
LOC120561601 kcns2,LOC102789903 coding downstream 158749 873040 ~ 876038 (-)
LOC120561835 NA coding upstream 4638 1051537 ~ 1053321 (-)
LOC120562566 mtdh,LOC103364934,LOC102233891 coding upstream 15659 1062558 ~ 1076714 (-)
ubr5 ubr5 coding upstream 41838 1088737 ~ 1144915 (-)
LOC120561787 azin1 coding upstream 113300 1160199 ~ 1172545 (-)
si:dkey-29h14.10 NA coding upstream 261957 1308856 ~ 1315136 (-)
G69698 NA non-coding downstream 71051 963496 ~ 963736 (-)
G69650 NA non-coding downstream 229485 805050 ~ 805302 (-)
G69615 NA non-coding downstream 691749 342587 ~ 343038 (-)
G69564 NA non-coding downstream 787847 246688 ~ 246940 (-)
G69541 NA non-coding downstream 801289 217828 ~ 233498 (-)
LOC120562682 NA non-coding upstream 6431 1053330 ~ 1055361 (-)
G69742 NA non-coding upstream 33480 1080379 ~ 1080878 (-)
G69746 NA non-coding upstream 35739 1082638 ~ 1083151 (-)
G69794 NA non-coding upstream 38603 1085502 ~ 1155503 (-)
G69799 NA non-coding upstream 126263 1173162 ~ 1173415 (-)
osr2 osr2 other downstream 302031 728485 ~ 732756 (-)
zfpm2a zfpm2 other upstream 678259 1725158 ~ 1861166 (-)
usp45 usp45 other upstream 1680269 2727168 ~ 2818027 (-)
G70407 NA other upstream 2582234 3629133 ~ 3629818 (-)
LOC120563202 NA other upstream 2932412 3979311 ~ 3979414 (-)
eny2 eny2,LOC100692744 other upstream 3025425 4072324 ~ 4077811 (-)

Expression



Co-expression Network