slc6a19b (LOC104965566)


Basic Information

Item Value
gene id slc6a19b
gene name LOC104965566
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 19434690 ~ 19440233 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804704.1
TAGTCAATCTATTACAGAGGTCCAGTTCATATTGCAGGATCTCATGGTGTGAGCCTCAATTTACATCCCAGACCTTCACAGTGCACTATTGAATCACTGCAATACTAGTGTTCGACAGATCATGAAGTTACAACTCCCCAATCCAGGCCTGGAGGACAGAATACTGTCCCATCAGCAGCTGGACAAACTGGAGAAGGACGAGGCTGGAGACAGACCAAAATGGGACAACAAGACCCAGTACATGTTGACCTGTGTTGGGTTTTGTGTGGGACTTGGAAATGTCTGGCGGTTCCCCTACTTGTGTCAGAGTCATGGAGGAGgagCATTTATGATACCATTTTTGATCCTGCTGGTTCTTGAAGGAATCCCACTTCTGCACCTTGAGTTTGCTATTGGTCAACGTTTAAGAAGAGGCAGTTTGGGAGTGTGGGCTACAATTCATCCCTATTTGACTGGCATTGGTATTGCATCTATGTGTGTATCTCTGACGATCAGCCTCTACTACAACACCATTATGGCCTGGATTCTGTGGTACTTGTTTAATTCATTTCAAGAGTCTCTGCCTTGGAGCCAATGTCCCATGAATGCTAATTTGACAGGTATTGTCTCCGAGTGTGAGAGGAGCTCCCCTGTGGATTATTTCTGGTACAGGGAGACCCTGAACACAACTCCAGCGATTGAAGAAGACGGCGGTCTGCAGTGGTGGATACTGTTATGTCATATATGTGCGTGGTCTGTCCTCTATATCTGCATCATTCGTGGTATTGAGACCACCGGGAAGGCTGTGTATGTGACTTCGACACTTCCCTACGTGGTGCTGACAATTTTTCTGATCAGAGGGTTGACCCTGAAGGGCTCTTTGAATGGAGTTAAGTTTCTCTTCACACCAGACtTAACAGAGCTGGCTAAGCCATCAACATGGCTCGATGCGGGTGCTCAAGTTTTCTATTCCTTCTCTCTGGCTTTTGGTGGTCTTATTTCCTTCTCCAGCTATAACTCAGTGCATAATAACTGTGAACAGGATGCAGTGATTATCTCTATCATCAACGGTATCACCTCTGTCTATGCGGCAACCGTCATTTACACCATAATCGGCTTCAGAGCAACAGAGAGATTTGACAACTGTCTTTCTGGAAACATCCTAACATTACTAAATGTGTTTGAGCTTCCTGAGGGCAACATCACTGACAGCAACTACAATCAGGTTGTTGAGCATCTTAATGCAACACACCCTGAGGTTTTTCAACAGCTGGATCTTAAGACCTGCAACTTAAATACTTTTCTTAGTGAGGGAGTTGAAGGGACTGGTTTAGCCTTCATTGTGTTCACTGAGGCTATCACCAAGATGCCCCTCTCACCGTTGTGGGCTGTCCTTTTCTTCATAATGCTCTTCTGTCTTGGCCTGTCTTCTATGTTTGGTAACATTGAGGGAGTTCTAGTACCACTGCAAGACCTCAAGGTCTTCCCTAAGACATGGCCAAAAGAGGTTGTCACTGGTGTAACGTGCATGCTCTGCTGTCTGGTGGGTCTGATATTTATCCAAGGCTCAGGAAGCTATTGGCTTTCACTCTTTGACACCTATGGAGGATCCATCCCTCTGCTAGTTGTTGCATTCTGCGAGATGATCTCAGTGGTGTACATATATGGGATAGACAGGTTCAATGATGATATTAAGTTCATGATTGGACACAAACCCAACTTCTTCTGGCAGGCGTCATGGAGAGTCATCAGCCCACTCATCATGTTTATCATCTTGGTCTTTTACTTCGTCACTAAAGTTTCTGAAAAGATCGTTTACAAAGCCTGGAATCCTGAATCGAATACATTCCCCACACTGGAAGAAAAGCCATATCCAGTCTGGATCTATGCGATCATCTTTATATTGGCAGGGATACCCAGTCTTGCTGTGCCTTTCGTTTGTGTCTGGAAATGCTTAAAGTCAAAGAAGAGGGATAAGCCACCTCTCGATAATATCTCTGACCAAATTCAAATGAACAATGAGAGCAAAAAATCCACAGCCTAATATTGTGGTAAAATCCCCAATTTTCTATTTTGCTCTTTTTCAAGAACATTTAAGTGGTTGCTATCATGGTTTAATCGACGCAATTTTAAAATAGAAGGCATAGCTTTTCTGAACAGAACTCTGTGGTTCCTCAGCCACCTGTGACAGCGCTCACTTCTTAGCAGTGAATCAGGTGACAATATGTAAAGCTGTAAAATTCAAAAGACACAGCTACATAACAATTTGCTTTAAGGTTGGTCTGTTTCCTGTTAATTCAAAGACGTCTCCCAAAACAGTAGCTTATTGGCTTTCTATTCTCTCAGTTATTTGTCGAGTAGTAGTGTGGCTTTCTGCAAGGCATCACTCTCAGATTACCCGTCGTAAAAAGACCTTGTCATCCTAAAAACACCAGAAACAATGTCCTCAAACAATGTCATTGAGTGCATTGAGCTAACAACAAATCTGTATACTATCACTTTTGTGAAGGCAATACATTTGGCTAATACAATGGTATTACATTTGTATTGTGTCCAATTAATGCAAAGAAATGAAAATCTACTGAACGCAGGATCTTAGTGCATGGGTTGATCTTTCAGACGGCTTAAGTATGATTTGACTATTCCATGTAGCCATTTGAGAATGAGAGGAGGTGCTGCTcttgtccttctgggtcaaaattgaaaatgtttttgtcgcttttttttaacatgtttttgtcgcttttttcaacgCTTTTTATACATAGTCAATACACCTAATTTatttgacattatacctaatttttgagttaaaaaaaagcaataattatgaattatttttgactaatagttcagaggatgttgagtggatcacagactggtatcgGTCAGTAAGTTgtaagtttagtcaggatatactgttttgatttcttttttcaaatgctataaaattgtatTAAACACCCAAAACTCAATGAAAGttagtatttatttttcctGGGAAGAATATTGTGGTTCCATACGTCCAAtgtacatccatgcatccatgttattatttaataacaagcaatttggttgaatatttctgatataaaaaactttgaaaacgggtctaatttgacccgaggacaacacaaaggttaagCCATGTAATGAAGGTGCACCCATCTGTCCAGCTGGGGGCACTACTGTGACGTATTTGAGaagtaaattaaatattgatTAAATCAGCTGCATAGTGTTGTGTTATTTTAAATCCCTTAGATTCTGCATttgtctgtaataaaataaaactgattgACACTA

Function

NR:

description
PREDICTED: sodium-dependent neutral amino acid transporter B(0)AT1-like

GO: NA

KEGG:

id description
K05334 SLC6A19; solute carrier family 6 (neurotransmitter transporter) member 19

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804704.1 True 3285 mRNA 0.41 12 19434690 19440233

Neighbor

gene id symbol gene type direction distance location
rxrbb LOC104965568,LOC103368225,LOC101470553,LOC100711502 coding upstream 94976 19328950 ~ 19339714 (+)
LOC120563155 NA coding upstream 154068 19278315 ~ 19280622 (+)
LOC120562959 NA coding upstream 164921 19245358 ~ 19269769 (+)
LOC120562666 LOC102206297,LOC106517725,LOC104965579 coding upstream 213738 19211495 ~ 19220952 (+)
LOC120562665 NA coding upstream 223292 19205598 ~ 19211398 (+)
LOC120561621 LOC105018833 coding downstream 604 19440837 ~ 19446117 (+)
LOC120562733 LOC100705529,LOC103366949,LOC102296000 coding downstream 19322 19459555 ~ 19477316 (+)
sp8b sp8,LOC101158882,LOC104926695,LOC101468530,LOC107378685 coding downstream 137319 19577552 ~ 19582754 (+)
macc1 macc1 coding downstream 149870 19590103 ~ 19595355 (+)
twist1b twist1,LOC100712142,LOC103366955 coding downstream 171513 19611746 ~ 19613152 (+)
G73606 NA non-coding upstream 114642 19319438 ~ 19320048 (+)
G73586 csnk2b,LOC102207154,LOC106573472,LOC101175345,LOC104925497,LOC102778826 non-coding upstream 158174 19272727 ~ 19276516 (+)
LOC120562631 fxyd7,LOC103388498 non-coding upstream 271886 19159464 ~ 19162804 (+)
LOC120562629 NA non-coding upstream 275672 19158475 ~ 19159018 (+)
LOC120562630 NA non-coding upstream 276321 19148521 ~ 19158369 (+)
LOC120562732 NA non-coding downstream 13536 19453769 ~ 19456616 (+)
LOC120562701 NA non-coding downstream 174270 19614503 ~ 19625611 (+)
G73776 hdac9 non-coding downstream 194640 19634873 ~ 19639459 (+)
G73836 NA non-coding downstream 380002 19820235 ~ 19820591 (+)
G73871 NA non-coding downstream 578876 20019109 ~ 20052006 (+)
hcst LOC104925504,LOC104961397 other upstream 242588 19190020 ~ 19192102 (+)
G73570 LOC103371659 other upstream 275695 19148613 ~ 19158995 (+)
kmt2bb kmt2b other upstream 572732 18833245 ~ 18861958 (+)
proser3 NA other upstream 606002 18819201 ~ 18828688 (+)
LOC120562824 NA other upstream 688015 18744662 ~ 18746675 (+)
si:ch211-254p10.2 LOC102209663,LOC101158134,LOC102295699,LOC101064473 other downstream 6934 19447167 ~ 19453283 (+)
G73779 hdac9 other downstream 206742 19646975 ~ 19649511 (+)
LOC120561838 tppp other downstream 752457 20192690 ~ 20209327 (+)
si:ch211-257p13.3 kifc3,LOC102783047 other downstream 774355 20214588 ~ 20226991 (+)
gra NA other downstream 882097 20322330 ~ 20325961 (+)

Expression


Co-expression Network