clk2b (LOC104944907,LOC101465036,LOC102211389,LOC100710865,LOC102298503,LOC102787711)


Basic Information

Item Value
gene id clk2b
gene name LOC104944907,LOC101465036,LOC102211389,LOC100710865,LOC102298503,LOC102787711
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 22651638 ~ 22657098 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804708.1
ctCTCTATCTGTCCTCTTCTCTTCGTCTCAATCAATCcgtcactttgtttttgtcgtGTGCTTTCTTGTTCACTTGTGTTTGatttctgcttttctttattCCTCTTAAGCTATTTTTTCTTCTGTCAGTTTTGTGGCTAGTTGTGTCTCACCTTCACTTCTGGTTTCCACTGGCAACGTTGCTATATTTGACTTTGTCACAACTTCATGTCCCGTAGTTTTTTCTGTGCCACTGCTTTAATATAGTTTTGACCGTCCTTTGTGCTTTTTTCTCTCCGCAACTCCTAGTCGTCTAGTTTTGCTGCTTTTGCTTCACCTGCCTCTCTccttcaccgtaacccccatccatcttcttctcttctcttccacTCAATCTCTTCTCATCTCTGAGGAACTCTGCACTTCTGCATCATGGGAAAGACAGAGCTGTGCTCTCTCTACAAGGGTTTTCTGGACTGTATTTGCCTCTGCCTCTCTCGGAGCAGCAATGAGGCTGCAGGCGACAATGAGAGGGACACTGAGAATGGCCACCTGATCTACAAAAGCGGGGACATCCTCAAAGACAGATATGAGATAATTGACACTTTAGGTGAGGGAACCTTTGGGAAGGTGGTGCAATGTTTGGACCACAGCAGaggaggaggtggaatTGCTCTGAAGATCATTAAGAACTTGGATAAATATAGAGAAGCAGCCAAACTGGAAATCAATGTTCTGGAGAAGATCAGCGAAAGAGATCCAGATAACAGACATCACTGTGTGCAGATGCTGGACTGGTTTAACTACTACGGCCACGTGTGCATCACTTTTGAGCTGCTGTCTCTCAGCACCTTTGACTTCTTGAAAGCAAACAACTTCCTGCCTTATCCCGTTAACCAGATCCGACACATGGCCCACCAGATCTGCGACGCTGTCAGCTTTCTCCATGACAACAAGCTGACTCACACAGACCTGAAGCCTGAGAACATCCTCTTTGTCAACTCAGGCTACTCCCTCGTATACAACGCTGAGAAGAAGTGCAATGAGCGGAGAATAAATGACACCACAGTGCGGCTTGTCGACTTTGGCAGCGCTACTTTTGACCACGAACACCACTCTGCCCTCATCTCTACACGGCACTACCGAGCTCCAGAGATCATACTGGAGTTGGGTTGGAGTCACCCATGTGATGTGTGGAGTATCGGCTGCATCCTGTTTGAATACTACGCAGGCTTCACACTGTACCAGACTCATGACAATAAGGAGCATCTTGCTATGATGGAGAGCATACAGGGACCAGTTCCTCAGAGAATGATTCAAACGAGCAGAAAGCAAAAGTATTTCCACCGTGGGCGTCTCGACTGGAATCAGTGGTCCAAGGCCGGACGCTACGTGAAAGCCAAGTGCAAACCATTAAGGAAGTACTTGTTATCTCACGGCACAGAACACCACCAGTTGTTTTACCTCTTAGAGAGGATGCTGGAGTATGAGCCCTCCACACGcatctctctttcctctgcCCTGTGTCACCCCTTCTTCCTGCCTCTTCATCATCCAGGAAGGAGTCAAACCTGGAGGAACAGCTGTGATTTGAGCAAATGAACCTGAATAGTCAACTGACTCTACGAGGACCATACCAGTGTGTTTTCAAGTTTTAGTTTCTCAACTTCAAATCAGAAGAAAGTAACTGAAAGAAGGGCTTAAAAAGTTATTGTgcacaatgttgaaaaaaaaaaaaagttgaaatgcTTTATGTTAGAAATCTTTGGCTTTATGGGGGTAATCATGCCGTGAGCCCAACAGGAATATTCCCCCGATGCAGTCGAGACCAGGGTGGTGGTGAAAGAGTGAAGAACAATAGCTGAAGATTTGGATGCATGTGATCTGGAGCAAGTTTTCGAGAGAGCTCAGTGGAAGAACTCATGGGACAGCTGGTTCTGATGACATGGGGTCGAGGTGGGTCATGTCAATCAGACACTGAAATAACCGAAAGGAAGATTTGTTTGACACCAACAAGCTAATTTGTGACaccctcagtcagctgattgAGTTCTAAGTGGGAAAGAAATATCTGACTCTTTAAGTGCTAAATGCTTCTTTACGTTCACATTTATTTAGCATTGGTGCTGAGCGGTGCAGGTGGTGCACAGTCGGCTGAAAACGACACTGATAAAAGTGGTGAGAGTGAAACAAAACAGTTGAGAAAACAACGAGCTGAAAGACGCTGGAACTTTATAAAGCTAAGGGGAACTGCAACTCACAATACTGCTGAGGGTGGCCAGTGCTCCTGTAATATTAAGCCTCTGGCCCCCCCAAACGGTGGCAAGTATTTTTATAAAATCTTTCAATCCCACCTTTATCCCCAAAGAAGgggatattattcatgtgcattgataaataaaatgtaggttaCCACTCAA

Function

NR:

description
PREDICTED: dual specificity protein kinase CLK2-like

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K08823 CLK2_3; dual specificity protein kinase CLK2/3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804708.1 True 2399 mRNA 0.45 11 22651638 22657098

Neighbor

gene id symbol gene type direction distance location
LOC120561656 NA coding upstream 251 22643346 ~ 22651387 (+)
setdb1b setdb1 coding upstream 8560 22629617 ~ 22643078 (+)
LOC120561960 NA coding upstream 24106 22627347 ~ 22627532 (+)
cers2b cers2,LOC108241136,LOC102789054,LOC101467232,LOC102212238 coding upstream 44710 22589127 ~ 22606928 (+)
adamtsl4 LOC104944899,LOC101074756,LOC106573456 coding upstream 95346 22519118 ~ 22556292 (+)
LOC120562535 LOC103478110,LOC102236274,LOC103136813,LOC106922010,LOC106957061,LOC107088793 coding downstream 10818 22667916 ~ 22674134 (+)
pklr LOC100711399,LOC101487503,LOC102296262,LOC108235536 coding downstream 17179 22674277 ~ 22687960 (+)
zbtb7b LOC104949237,LOC102209066,LOC102295659,LOC100711944 coding downstream 53041 22710139 ~ 22732441 (+)
LOC120562542 LOC100712213,LOC102785254,LOC101485676,LOC102294439 coding downstream 76229 22733327 ~ 22740710 (+)
kcnj14 kcnj14,LOC104949235,LOC102784483 coding downstream 110029 22767127 ~ 22784419 (+)
G74769 NA non-coding upstream 396160 22255271 ~ 22255478 (+)
G74765 NA non-coding upstream 405875 22245489 ~ 22245763 (+)
G74764 NA non-coding upstream 408605 22242817 ~ 22243033 (+)
G74760 NA non-coding upstream 467601 22183783 ~ 22184037 (+)
G74737 NA non-coding upstream 521724 22129652 ~ 22129914 (+)
G75042 NA non-coding downstream 261654 22918752 ~ 22920103 (+)
G75045 NA non-coding downstream 267494 22924592 ~ 22925155 (+)
G75065 NA non-coding downstream 325794 22982892 ~ 22987322 (+)
G75069 NA non-coding downstream 337322 22994420 ~ 22994706 (+)
G75077 LOC104960445 non-coding downstream 359709 23016807 ~ 23018595 (+)
arnt NA other upstream 25685 22610018 ~ 22625953 (+)
celf3b LOC104944900,LOC100708447,LOC107088821,LOC107379582 other upstream 66066 22559944 ~ 22585572 (+)
rprd2b NA other upstream 161694 22469978 ~ 22489944 (+)
rusc1 LOC104958857 other upstream 339118 22264939 ~ 22312520 (+)
LOC120562537 NA other downstream 3381 22660479 ~ 22667885 (+)
LOC120562539 LOC102295960,LOC100711672,LOC102209551,LOC101487210,LOC102786116 other downstream 31972 22689070 ~ 22705416 (+)
myh14 NA other downstream 128480 22785578 ~ 22820053 (+)
cnot3a cnot3 other downstream 242991 22900089 ~ 22911520 (+)
LOC120562293 LOC103360151,LOC102310947,LOC102785150 other downstream 413489 23070587 ~ 23083147 (+)

Expression


Co-expression Network