LOC120561585


Basic Information

Item Value
gene id LOC120561585
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 41727566 ~ 41850702 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804728.1
TACTGCAGAGCGACAGTCTACAGTGGATCAGGATCAGGCCGAAGGATGAGTAGGACTCTGCTGTGGCTGCTGGCCTCTCTGGCCtttgtctctctgacttctcaGGCTGATGGAGCTCCATTGAAGCTGATGTCTGCCCCTAACTTGTTGCGGGTAGGAACagcagaaaacatctttgtggaGTGTCAAGACTGCACCGGGGGAAACATCCCGGTCCAAATCAACGTGATGAACCATCCAACCAAGAGCACAACGCTGACATCCACATCTGTGACCCTTACCAGTGAAAGAAACTTCCAGGAGCTCGGACAAATAACGATCCCTGCTGACAGCTTCAGTAAGGATCCTACCATAAAGCAGTATGTCTACCTGCAAGCTCAGTTCCCTGACCACCTGCTGGAGAAAGTCGTCTTAGTGTCCTTCCAGTCCGGGTACATCTTCATCCAGACGGACAAGACCCTCTACACCCCCAACAGCAAAGttTATTACAGGATGTTTGCATTGACGCCCGGTATGGAGCCCGTAGAGAGGGATGCCGAAACTCAAACTGATGCTTCTATTGCCATCGAGATTGTGacccCTGAGGACATCATTTTACCATTGGATGTAGTCCCTTTGAAATTAGGGATCCACTCTGGAGTTTACCAACTTGCTGAAATTGTCAGtcctgGACTGTGGAAAGTGGTGGCGAAGTTCCAGAGCAACCCACAACAGAGCTATTCTGCAGAGTTCGAGGTCAAAGAATATGTGCTGCCCAGTTTTGAAGTTAAACTGATGCCTGAAAGATCCTTCTTCTACGTGGACAGTCCAGTGCTCACCGTCAACATCAGAGCTACGTATCTGTTTGGTCAAGAGGTGGATGGGACGGCCTACGTGGTGTTTGGGGTTATGCAAGACGGTCATAAAAAGAGCTTTCCAGGTTCTCTTCAGAGAGTGCAGATAGAGAATGGTAATGGAGAGGTGACACTAAAGAGAGACCACATCACACAGACTTACCCAGACATCTCTGAACTGGTGGGGAGCTCCATGTATGTAGCTGTTGGTGTGCTGACGGAGAGTGGTGGTGAAATGGTGGAAGCGGAGTTGAGAACTATCCAGATTGTTACATCACCTTACACTATCACCTTTAAGAAAACGCCCACATTTTTCAAACTAGGAATGTCCTTCCATGTTACGGTTGAAGTTGTGAATCCTGACGGCAGTCCGGCAGAGCGTGTTGCCGTGGTGGTCGACCCCGGCCAGGTGAAAGGCATTACCGCAGCCAATGGCATGGCAAAGCTTCCCGTCAATACAGTGGCGACGGCACAAAGACTGACAATCACCGCAAGGACCGAGGATGATCGTATTTCAAATGAAAGGCAAGCATCAGCCACCATGGTAGCTCTCCCATATACCACTCCAAGCAACAACTACATCCACATAGGTGTGGATACACCTGAGCTGAAATTAGGAGACAACCTGAGATTCAGCCTCATACTCAACAGGCAGGAAAAACAAGACACTGACATCACATACCTGATCCTGAGCAGAGGTCAGCTGGTGAAAAATGGACGTTACAGGAACACAGGTCAAGTTCTGATTTCCCTGAGTGTTCCCATTACCCAAAACATGCTGCCATCGTTCCGCATCGTAGCCTACTACCACACAAATGACAATGAAGTGGTATCAGACTCTATATGGGTGGATGTAAAGGACTCCTGCATGGGCTCGCTGAGACTGGAACCATTGAATCCCGCTCCATCCTATGAGCCTCGCAGGTCCTTTGGTCTGAAGGTCACTGGAGACCCAGGGGCCGTAGTGGGACTGGTGGCAGTTGACAAAGGCGTGTACGTCCTAAACAACAAGCACCGTCTCACCCAGAAAAagGTGTGGGATACTGTGGAGAAGTACGACACAGGCTGCACACCAGGAGGAGGGAAGGATGGTATGGGTGTGTTCTACGATGCTGGGCTGTTGTTTGAGTCCAAAACGGCTTCTGGAACTCCCTACAGACAAGAATTAAAATGTCCGGCCCCCAGCAGGAGGAAACGAGCCGCTACTATAATGGATGTAACAACCAGCTTAGTGAGTCAATATCAAGACCAACTCCAACGTGAGTGTTGTTTGGATGGCATGAGGAACACCCCCCTCTCATACACCTGTGAGAGGCGAGCGGAGTACATCAGTGATGGTGAAGCCTGTGTCGCAGCCTTCCTGCACTGCTGCAAGGAGCTGGAAACCCATCGAGCTGAGAGGAAGGAGAATAACCTTATACTGGCTCGCAGTGAGGAGGATGACAGTTACATGGACAGCGATGAAATTATTTCTCGCACCAAGTTCCCTGAAAGTTGGCTGTGGTTAGATGTGACTTTGCCTGCTTGTCCTCAACAAATACCAGACTGTGACACCACATCACTGACGACAAATGTTCATTTGCAAGACTCAATCACAACCTGGCAGTTCACTGGCATTAGTCTGTCAAGAGCTCACGGAATCTGTGTTGGCGAGCCATTAGAGGTCGTTGTCCGGAAGGAGTTCTTCATTGATCTCAGGCTGCCGTACTCTGCTGTCCGTGGAGAGCAGCTGGAAATTAAGGCAATCCTCCACAACTACACCCCCGATCCTATCACCGTGCGTGTGGATCTGACTGAAGAGCAGCATGTGTGCAGTTCAGCCTCTAAACGTAGAAGGTATCGCCAGGAGGTCAAAATGGGGGCCCAAACTACACGAGCTGTACCCTTCATCATTATTCCCATGAAAGAAGGAAAATTTAACATTGAGATCAAAGCAGCTGTTAAAGATTCTTCGCTAAATGATGGAATCATAAAGAAGCTGCTGGTGGTGCCTGAAGGCGTACTGGTTAAATCTCCTCAGATTATAATTCTAGACCCCACTACTAAAGGTGTAGCTGGTAAACAAGAAGAAACTCTCAACAGTGGAATTCCTATCAAAGATTTGGTCCGAAACACACCTACTAGCACACAGATCTCAGTGACAGggagaGAACAAGTTTCTACGCTGGTGGAGAACGCCATTAGTGGGGACTCTATGGGTACTCTGATCATCCAGCCCAGCGGCTGTGGAGAGCAAAACATTGCTAGCATGACCCTACCAGTCATTGCAGCCACATATTTGGACAAAACCAACCAATGGGAAACTGTGGGCTTTCAGAAACGTAACGAAGCCCTCCAACACATCAAGACCGGCTACCAGAATGAGCTTGTCTTCCGTAAAAAGGATGGGTCCTTTGCTGTTTGGGCGCATAGCGAGAGCAGCACCTGGCTGACAGCGTATGTTGCCAAGGTGTTTGCCATGGCTGACAATCTGGTGGCAGTTCAAAAAGAGCACATCTGTGAAGCCATCAAGTTTCTGGTTCTCAGGGCACAGCAACCTGACGGCTCGTTTAGAGAAGTTGGAACGGTTAGCCATGGAGAGATGATTggtgatGTGAGAGGTGCAGATTCAGATGCCTCCATGACGGCCTTCTGCCTCATTGCCATGCAGGAGTCTCGCACACGATGTAATGACACTGTTCAAAGTCTGCCAGGCAGTAAAGACAAAGCAGTGAAGTATCTGGAAAGGCGTCTGCCCCGCCTCACCAACCCATATGCTGTTGCCATGACGTCATATGCCCTGGCCaatgaaaacaaactgaacaaGGAGATCCTCTACAAGTTTGCTTCCACAGAGAGGTCCCACTGGCCAACACCTAAGGGACACGTTTACACACTGGAGGCCACAGCTTACGCTCTTCTCGCTCTGGTCAAGGCCAAGGCATTTGAAGAAGCCAAACCTGTTGTGAGATGGTtcaacatgcagcaaatggtGTACGGAGGCTTTGGATCAACTCAGgCTACTATAATGGTGTACCAGGCCATAGCCGAGTACTGGGCTAGTGCTAAAGAACCAGAGTATGATCTGAATGTGGACATTCTGTTGCCGGGCAGGTCAAAGCCTGACAAGTTCAACTTCAACAGAGACAACCACTACGCCACCAGAACATCTAAAATCAATGATATAAACCAGAATGTGACAGTAAAAGCCGAGGGTACAGGAGAAGCTACGGTGAAAatGGTGTCTCTGTATTACGCTCTGCCTAAAGAAAAGGAAAGTGACTGTCAGAAGTTTAACTTATCAGTGCAGCTCCTGCCAGAGAAAATGGATGAGGACGAGAAAATATACAAGCTGAAAATAGAGTTTTTGTATAAGGACAAAGAGAGGGATGCATCCATGTCAATCCTGGATATTGGTTTGCCAACTGGCTTCACCGTTAACACAGCTGACCTGAACTTAttgTCTAAAGGACGAGCCCGCATATTTCCAAAATATGAGATGAACAAAGTCCTGTCAGAAAGAGGCTCACTCATCATCTACCTGGACAAGGTTTCTCACACACGACCAGAGGAGATTGCTTTTAGGATCCATCAGGAGATGAAAGTGGGATTCACACAACCAGCTGCTGTGTCTATCTATGAATACTATAACCAAAGACATTGTGTCAAATTCTACCATCCAGAGAGGAAAGCTGGAAAGCTAATGCGTCTCTGTACAAGTGACACATGCAAATGTGCAGAAGAGAACTGCAGTATGCAGAACAAGGAGGAAATCACCAATGATCATCGAACAGCTAAGATCTGTGAGAGTATACAGACCAGCATAATAGATTATGCGTACAAAGTGAGACTGGaaagttttgaagaacatttgtCCACTGACATTTACAAAGGGAAGGTACTGGAAGTCTTCAAAGAAGGAAGTACTGATGTGGGTCCTCTGAATCAACAGCGCACATTCCTCCGTTATCCCTACTGCAGGGAGTCTTTAGATCTGGGGACGGGCAAAACCTACCTTATCATGGGCACGTCCAAAGATATTCACAGAGATGACCATCAATCGTATCAGTATGTGTTTGGAGAGAGAACCTGGATCGAGTACTGGCCCACAGAAGCTGAGTGTCAAACTGAGGAACACAGAATCACCTGTTTGGGCTTGGAGGAGATGGTTCAACAGTACGAGATCTTTGGGTGTCAGCAGTAGTGAAactcaagaaaagaaaatgtcatttaaaattgttttttaatttgcatCATTCTTATTATGTAAAACATTCCCTGCTATGGGATATGATGGCTCACAATGTTCCACTGTATTGATTAAAATGTAATGGTCTTAAAGGTTCAGTAGGAAAGacataaaactacctttctgtcatatttgctgaaactgaccctatgttcaagtagaactacatgaagcaggtcatttagttcgggggaggagggaggggct

Function

GO: NA

KEGG:

id description
K03990 C3; complement component 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804728.1 True 5268 mRNA 0.48 43 41727566 41850702

Neighbor

gene id symbol gene type direction distance location
LOC120562406 NA coding upstream 151063 41551091 ~ 41576503 (+)
LOC120562396 NA coding upstream 181972 41541090 ~ 41545594 (+)
LOC120562404 NA coding upstream 225907 41500185 ~ 41501659 (+)
LOC120562390 NA coding upstream 407862 41239083 ~ 41319704 (+)
LOC120562388 NA coding upstream 433185 41220084 ~ 41294381 (+)
LOC120562755 NA coding downstream 676794 42527496 ~ 42529482 (+)
LOC120562768 NA coding downstream 812816 42663518 ~ 42666003 (+)
LOC120562762 LOC104963449 coding downstream 913701 42764403 ~ 42768664 (+)
LOC120562761 LOC104963449 coding downstream 937007 42787709 ~ 42800596 (+)
LOC120562763 LOC106675675,LOC106675676 coding downstream 974896 42825598 ~ 42831659 (+)
LOC120561593 NA non-coding upstream 9875 41711655 ~ 41717691 (+)
G80363 NA non-coding upstream 30156 41638138 ~ 41697410 (+)
G80376 NA non-coding upstream 76616 41650507 ~ 41650950 (+)
G80365 NA non-coding upstream 110200 41616909 ~ 41617366 (+)
G80364 NA non-coding upstream 112305 41614100 ~ 41615261 (+)
G80402 NA non-coding downstream 28059 41878761 ~ 41879073 (+)
G80405 NA non-coding downstream 45216 41895918 ~ 41999125 (+)
G80406 NA non-coding downstream 68765 41919467 ~ 42422688 (+)
G80407 NA non-coding downstream 76756 41927458 ~ 41927764 (+)
G80414 NA non-coding downstream 95987 41946689 ~ 41999282 (+)
LOC120561589 NA other upstream 34561 41682413 ~ 41693005 (+)
G80337 NA other upstream 271208 41421356 ~ 41456358 (+)
LOC120562389 NA other upstream 334340 41377447 ~ 41393226 (+)
G80320 NA other upstream 367360 41356480 ~ 41360206 (+)
polr3glb NA other upstream 540621 41156474 ~ 41186945 (+)
G80410 NA other downstream 88796 41939498 ~ 42006594 (+)
G80682 NA other downstream 634633 42485335 ~ 42486009 (+)
LOC120562757 LOC104947480 other downstream 682222 42532924 ~ 42539601 (+)
LOC120562767 NA other downstream 781705 42632407 ~ 42643990 (+)
LOC120562772 NA other downstream 932793 42783495 ~ 42786405 (+)

Expression


Co-expression Network