LOC120561605


Basic Information

Item Value
gene id LOC120561605
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 17739832 ~ 17741380 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804751.1
CTAATGAAGTGGATGCAGAGTATCCAAAACCACATATACTGGACTGCAGCATCATCGACCACTGGACCTGAGAGAGTGGCGAAATGGACCTCCATCCTGAACCACGTGCTGGATATCCACACACATGAGGACCCGGTTTTCCCCAGGTGCCTCCATCCCCAGCGCCAAACcagggacaaaaagaaatggaTGGAAGCAGGAACTCCTGCCTTCTACAAGCTAGAGAAGGTGATGACAAATAAGAGGATCTTGAAGGATGTCTCCCACCCCCAGACTTCATCTTTGGAGGATTTCCATCGGGCCATTCAACGTTTTGCTCCTAAAAGCATTGAGTTTCCATTTCTTGGATTGCTGTGCAGACTCTACCTGGCTGGCCTTTATTACAATGAAAATGCTGACCAGATGGCAGAATGCAGTGCAAAACCAGTGAAGACAAAGCCAACGTTCCGATATGTGGATGACTTGATGGACCTCATCTTTGAGAAAGTCTTTGTGGACCCGTCACCTTACCTGGATGAGGTTTTGAAGATTTCCATCCCAGAGGACCTGTGTGCACAAAATGATCCGCCAGATACGGAGGTCATCGTCAGTTTCCATGTTCAATGAAGCGGCAGTCTGACCCATACTGAGCTGCTTTGGGATCAGAAACTCCCTGTGGATATGAAGAACCAGGCTGGACAATATATTCAGTGATGTAAACATCTATCTATAGGTTCAGTGAATCCTTGAGACTccccttttctatttttttttttatgcatgaGTTATCATGTTATTATCATGTTGTGACAAAACAGTACAACACTGCATAGTGCAACTACTGATGAATGTGATAACACTACATACTTTGCATTGTCTGTAAAATGCCTCATGTGAGTTCATGTTAAATATGCAGATTATGTGAGTTcatgtttaatgttaaacaaaatGCTCTAAAACACATATGTTCTGAATTCGGGATATTATTCAACTATAACTTGGGGAAGTTAATTGTGTTGTGACCATTGTAATTTAAAGCCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804751.1 True 1021 mRNA 0.43 4 17739832 17741380

Neighbor

gene id symbol gene type direction distance location
oprd1b oprd1,LOC104947907,LOC104938665,LOC103361913 coding upstream 116143 17617748 ~ 17623689 (+)
tcea3 tcea3,LOC103388456 coding upstream 146805 17584023 ~ 17593027 (+)
tent5ba fam46b,LOC102799042 coding upstream 172566 17562473 ~ 17567266 (+)
zdhhc18a zdhhc18,LOC100695947,LOC102211057 coding upstream 189638 17541057 ~ 17550194 (+)
pigv pigv coding upstream 200410 17536530 ~ 17539422 (+)
stmn1b stmn1,LOC100709726,LOC101465203,LOC105919219,LOC108245970,LOC102218266 coding downstream 506 17741886 ~ 17747026 (+)
si:dkey-34d22.1 LOC103360192 coding downstream 350923 18092303 ~ 18105749 (+)
LOC120562800 LOC103360186 coding downstream 429449 18170829 ~ 18172243 (+)
LOC120562798 LOC104954816,LOC108249991,LOC102795480 coding downstream 568692 18310072 ~ 18311498 (+)
has1 has1,LOC102795195,LOC103143133 coding downstream 573289 18314669 ~ 18318666 (+)
LOC120562054 NA non-coding upstream 234911 17500589 ~ 17504921 (+)
G73027 NA non-coding upstream 276805 17427828 ~ 17463027 (+)
G73019 NA non-coding upstream 336205 17392268 ~ 17403627 (+)
trnar-acg_16 NA non-coding upstream 371057 17368703 ~ 17368775 (+)
G72862 NA non-coding upstream 673921 17065589 ~ 17065911 (+)
G73186 NA non-coding downstream 182570 17923950 ~ 17926628 (+)
G73216 NA non-coding downstream 373335 18114715 ~ 18116323 (+)
G73230 LOC104960016 non-coding downstream 383614 18124994 ~ 18127318 (+)
G73231 NA non-coding downstream 386043 18127423 ~ 18127887 (+)
G73232 NA non-coding downstream 387639 18129019 ~ 18129219 (+)
G73123 phactr4 other upstream 92646 17645513 ~ 17647186 (+)
ubxn11 NA other upstream 278714 17456643 ~ 17461118 (+)
G73031 LOC103366415 other upstream 287264 17449585 ~ 17452568 (+)
G72750 LOC104952694,LOC106925895 other upstream 1667631 16018359 ~ 16072201 (+)
irx4a LOC103360443,LOC102233360,LOC103478376,LOC108232226,LOC101474805,LOC102784018,LOC102295185,LOC102202030,LOC104961814,LOC103145173 other upstream 2179540 15553464 ~ 15560292 (+)
paqr7b LOC107588505,LOC104938075,LOC103388542 other downstream 9550 17750930 ~ 17779130 (+)
kcnn4 kcnn4,LOC104953880,LOC100704922 other downstream 657676 18399056 ~ 18420721 (+)
LOC120562807 NA other downstream 714194 18455574 ~ 18461326 (+)
LOC120562806 NA other downstream 725048 18466428 ~ 18470078 (+)
LOC120562796 NA other downstream 891022 18632402 ~ 18637307 (+)

Expression


Co-expression Network