LOC120561633


Basic Information

Item Value
gene id LOC120561633
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 30136281 ~ 30137569 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804798.1
GCCTGCTCAGTAGCAGACCTGTCACCACTGGATAAAGACAAACCCACTGGACCACTAGCTACAATGGGACTGTTACAGGAAAGGAAAGATGCAACAAACGAAAGAaagCACATAAAATCTCAGGTGGAGAAACGTCGAAGGGAGAGGATGAACCACAGTCTGGAGTGTCTGAGGAACATGTTGCTTCAGGAGTCACAACAACCGGGTGGGACTCAGCACAGAGTGGAGAAAGCTGAGATACTCGAGCACACAGTCCTCTTCCTGCAGAACACTGCCAAAGGAGACAAGACGAGAGCTGGAGGAGGCCAGAAACACTCCTTCCAAGACGGCTTCTCCACCTGCCTGCAGACAGCTGGTCAGTTCCTGGGACCTGAGGGGAAAGGCCTGGGGCTTGGAGCAGCACTGGAGGCATCTCTTGCCACTCGCTTTTCCCATTCAGactctgaatctgcagctgtTCAAAATAGAACTGAAGCTCATTCCTCCTCCAGCTCTCTGCCACACACAAAGTCCATTCTTCACGTGCTGAGGCAAAAGTCCAAACACAGACGGCACAATCCAGCCTTCAGTGTTGCTCATCCGTATCAACTTCCGGTACAGCAGGGGGTCCCCCGAATTCCCCAACAGGCTCAGAGACTTAATCCGCTTGAGATAAGACGAGTGAGCAAGCAGAGCCAGTCCCAGAGCAGTCCGGTCAGCCAGACTTTATGGAGGCCCTGGCCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804798.1 True 726 mRNA 0.53 3 30136281 30137569

Neighbor

gene id symbol gene type direction distance location
pbx2 LOC103356852,LOC108245987,LOC101487230,LOC102193020,LOC100704063 coding upstream 2745 30125926 ~ 30133536 (+)
ntrk1 NA coding upstream 324492 29780179 ~ 29811789 (+)
LOC120562942 NA coding upstream 391100 29743009 ~ 29745181 (+)
LOC120562990 NA coding upstream 775156 29355633 ~ 29361125 (+)
LOC120562792 NA coding upstream 780739 29352141 ~ 29355542 (+)
tap1 tap1 coding downstream 32445 30170014 ~ 30182142 (+)
brd2b LOC104928643,LOC103356858 coding downstream 48777 30186346 ~ 30205056 (+)
LOC120562234 NA coding downstream 67608 30205177 ~ 30212236 (+)
LOC120562442 NA coding downstream 75070 30212639 ~ 30216695 (+)
LOC120561719 vmo1 coding downstream 81428 30218997 ~ 30223524 (+)
LOC120562092 NA non-coding upstream 15185 30118008 ~ 30121096 (+)
G77198 LOC103388947,LOC102796900,LOC101464846 non-coding upstream 237528 29894234 ~ 29898753 (+)
G77172 NA non-coding upstream 322740 29812931 ~ 29813541 (+)
G77114 bola1 non-coding upstream 551281 29582757 ~ 29585000 (+)
G77097 NA non-coding upstream 670729 29464612 ~ 29465552 (+)
LOC120562235 NA non-coding downstream 79179 30216748 ~ 30218603 (+)
G77260 NA non-coding downstream 260707 30398276 ~ 30402704 (+)
G77399 NA non-coding downstream 839172 30976741 ~ 30977081 (+)
LOC120562708 NA non-coding downstream 840758 30978327 ~ 30988733 (+)
LOC120562710 NA non-coding downstream 877564 31015133 ~ 31016447 (+)
G77239 NA other upstream 11643 30123702 ~ 30124638 (+)
rgl2 LOC101463702,LOC100700084,LOC102303531,LOC102796597 other upstream 26736 30073937 ~ 30109545 (+)
G77028 LOC104942601 other upstream 723868 29404008 ~ 29412413 (+)
LOC120562177 LOC104942602,LOC104934039,LOC103362363 other upstream 746228 29384135 ~ 29390053 (+)
G77009 ubqln4 other upstream 806023 29328789 ~ 29330258 (+)
LOC120562443 NA other downstream 213926 30351495 ~ 30360588 (+)
rab5ab rab5a,LOC104947906,LOC103388351,LOC105936747,LOC100704868,LOC101078239,LOC104931780 other downstream 549769 30687338 ~ 30731609 (+)
G77447 NA other downstream 997260 31134829 ~ 31136146 (+)
G77682 tbx20 other downstream 1838749 31976318 ~ 31979909 (+)
LOC120561717 NA other downstream 2267564 32405133 ~ 32421472 (+)

Expression


Co-expression Network