LOC120561655 (tmem74,LOC103359617)


Basic Information

Item Value
gene id LOC120561655
gene name tmem74,LOC103359617
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 10516857 ~ 10518991 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804822.1
CAGATAGCGAGGCTCCTTTCAGCGCCACAGCGCGGGCAGCTGAGGCTCTATGTGTGGGAGGGACTTACGGAGAGCTCCCCTCGGTGCAGCCTGCCGCCACAGCATCGAGCAGGGAGAGAATCTATTCAAAGCATATTCACTGATAAGGCTCTTTTATCTGTCCCCGTTATGTGCTCTGGCCCGCTTTAAAGTGTCTACGAAGAGAGGAAGGCGGAAGCGATGCTGAAGTAGCGCGGGATGCTGTGGAGTGAAAACATCGTGGGAGGAAGGCTCAGAGTGAACCAGCGGGTGGTGAAACACGAATGGCTTCTCCCGCTGATGAGAGAGGCAAACTGCCCGATTCTCCCAAAGTCCTTGACCGGGTATCCAGCACGCTGCAAGTCCGCAAGTCGGGCGGATCAACAGGAGGAGCGCACCCAGGGGAGGTCGGCTGTAACCCGGCCCGCAGCTGCCATGGCCGGTGTCATTCAGCGCCAAGGACGGCGCCGCGCAAGGGAGGCGCAGAGGTTAAACTCGGTCACCTCGGCGAGGAGAAAGTCCGGGTTTGTTGCGACGAGGAATTAGAGACATCTTTCACGTATATTGATGAGAATGTCAACCTGCGACTGGCCAGCCCGGAGACTAGTTGTAAAAGTACTCACAGACCCGTGCGCAACGGCGAGCCTTGCTCCGAGACTATACCAGAGTTTTCCTTTATGTCCGAGGACGATCTCTCTTTCGGGGAGGGCCCCGGGACTTCTATAGACTATGGCTTTATCAGTGCTGTCACCTTCTTGGTGACCGGGATCTCCTTGGTGATCATCTCCTACGCCGTGCCTCGGGATGTGGTGGTGGACCGTGACAGCGTGTCGGCGAGGGAGATGGAGAGGCTGGAGATGGAGAGCGCCCGGATAGGCGCCCACCTGGATCGGTGCGTCATAGCGGGACTGTGCCTGCTCACGCTGGGCGGCGTGGTGCTCTCCACGCTGCTGATGATCTCCATGTGGAAGGGAGAGATGTACAGGAGGAAGGTCATCGCTTATTCTAAGCGTTCAGCCAAACTGTATGGCTCTATCAGCCTGAAAACTAGATCCAGTCCCAGCCACTCTTCAGTGCATCTGTCCCTGGAGGAGGACGTAGAGGAAACTTTGGCTTAAAATGCTGCTCTGTGTACAAACCTTTTGTGTATAAAAGGAATTAATGCCATTCACACCCTTACTAACATATTGTAGCCTAAAACTGTATTCATACATTCAAAGTGTGAGTCTGAAACACATTTGTCTTATGCTGTAAAAATAGCTTGAATGCtgtattgtaggcctatatccACGTGGCAAACAGAAAGGACAAGAAAACCACTCAAATGCAAATTGAGGAATTGCCTGATAAACATTATGTGGTATCAAATAGTTCCCAAATGATTTCAAATGCTACCGAACCATAAAAGTGACCCAAGAGAATAAGAGCTTTTTGTGTCATA

Function

symbol description
tmem74 Involved in macroautophagy. Predicted to be located in autophagosome membrane; cytoplasmic vesicle; and lysosomal membrane. Predicted to be integral component of membrane.

NR:

description
PREDICTED: transmembrane protein 74

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804822.1 True 1459 mRNA 0.52 2 10516857 10518991

Neighbor

gene id symbol gene type direction distance location
LOC120562578 NA coding upstream 138103 10368865 ~ 10378754 (+)
LOC120562586 LOC104935658,LOC103355652,LOC101471248 coding upstream 159080 10328164 ~ 10357777 (+)
sim1a sim1,LOC103355653,LOC103388874,LOC102313558 coding upstream 275781 10215493 ~ 10241076 (+)
ascc3 ascc3 coding upstream 316452 10007275 ~ 10200405 (+)
hace1 hace1 coding upstream 1326768 9147615 ~ 9190089 (+)
eif3ea eif3e,LOC101480544,LOC102302331,LOC100691937 coding downstream 102201 10621192 ~ 10656796 (+)
rspo2 rspo2 coding downstream 143487 10662478 ~ 10729121 (+)
macf1b LOC102795676,LOC102290681,LOC101484559,LOC100704065,LOC104943360 coding downstream 442899 10961890 ~ 11002470 (+)
LOC120561921 LOC104943362,LOC103369138 coding downstream 491989 11010980 ~ 11016582 (+)
LOC120562012 LOC103388795,LOC103359769 coding downstream 1080123 11599114 ~ 11616059 (+)
G71609 NA non-coding upstream 314266 10201676 ~ 10202591 (+)
G71607 NA non-coding upstream 513164 10003481 ~ 10003693 (+)
G71591 NA non-coding upstream 687550 9828594 ~ 9829307 (+)
G71562 NA non-coding upstream 1061216 9455375 ~ 9455641 (+)
G71557 NA non-coding upstream 1144909 9371004 ~ 9371948 (+)
G71723 emc2 non-coding downstream 61169 10580160 ~ 10591406 (+)
G71738 NA non-coding downstream 99266 10618257 ~ 10618575 (+)
G71741 NA non-coding downstream 225020 10744011 ~ 10744271 (+)
LOC120562885 NA non-coding downstream 229132 10748123 ~ 10752652 (+)
G71826 NA non-coding downstream 600928 11119919 ~ 11120208 (+)
G71610 NA other upstream 308660 10207415 ~ 10208197 (+)
trnay-gua_42 NA other upstream 1667137 8849632 ~ 8849720 (+)
trnay-gua_41 NA other upstream 1667520 8849249 ~ 8849337 (+)
trnay-gua_40 NA other upstream 1668286 8848483 ~ 8848571 (+)
trnay-gua_39 NA other upstream 1669376 8847392 ~ 8847481 (+)
LOC120561920 LOC106676202,LOC102303534 other downstream 227017 10746008 ~ 10751849 (+)
LOC120562569 LOC104943359,LOC103359623,LOC101482188,LOC107100615,LOC106961743 other downstream 266663 10785654 ~ 10961130 (+)
G71743 NA other downstream 301304 10820295 ~ 10821500 (+)
depdc1b depdc1b,LOC103388656,LOC101486657 other downstream 948354 11467345 ~ 11482423 (+)
mbpb mbp,LOC104918400 other downstream 1018193 11537184 ~ 11599226 (+)

Expression


Co-expression Network