LOC120561656


Basic Information

Item Value
gene id LOC120561656
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 22643346 ~ 22651387 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804823.1
TATTACATTTCTGAATATAGCCTATCTAATAGCAAAAAGACCAGGCTTTATTTTCAGTAGCTCACAGTAGCTGACCAATCGCCTTCTGAAACTAAAATAAACATTCATCTGCTTTCACACGTTGGACCAAACCCGCTCGGATCTAGAATAATATCTGCAATTCATCAGCTATTTAATCAATTTTCCGAAagattttctaaaatgttttacTACCCTACAGTTTTGAAGCGGCATACAGGATGTTTTTCTACAATCTGGCTGGTTGCTACAAAAGGCATCAGAGTTACTCGCCGGGATTTCCTAAAAGTCAACGTCCAAAGCACCTGTGATGACATCATGAGCTACGTGCTGGAGCAGGTACCACCCCCTCAGCCTGGTCTGCCACGACCTCGCTTCTCCCTCTACCTCTCCTCCCAGCTCCAGTATGGCGTCATCCTCGTCTATCACCGCCAGTGTGCTATTCTCCTTGCTGAACTTCAGTCCATCGTGGGCTATCTGTTAAAACAGAGGGCATCCCAGAAAATTGATATGGATGAGCACGGCAGACAAGCCCTGGACTACCCTGATGCCCTGTCTCTCCTGGAGGAGACAGAAGGAGCTCTTGACCCTTTATTCGGAGTGATGTACATGGGAAAGGCCATGCCCAGTCCTAATACACTGATACAGaTGGGTCAGGAGTATCCGAGAGAAAGCTCTCCTGAGCATCCTGAAATGACCAGTCcagcttctgctgctgcaccaGACAGTGGCATAACTGCAACTCCAGAAGCCATTActctgagagagacagagcctCTCACTATCCCTATTGCAGAGTTTGAGGGTGAGGAGCTTATCGATCAGCATCCAGAGACAATTGACTTCCTCTTGGCCCAAACGGATACCTTTCCAGAAGGAGATTTGGAGATGCCAAGAGAAGATGTGACACCAGGAGAGCAAGAGGCGGAGATGGAAAGGGGCGGAAGTGAGGAAGACCTGGAGAAACAGAGAACAAAAGAGCTCACAGGATCCTCTATCGAATTACAGCCCACCACTCTGTCCAGTGAGCACGCCACGTTGTTGCCTCAGGAAGAGCCAGACCTGGCCGTGGAGAAGCCTGGACCCCCCTCAGACCAGGTCACCCCCGTCTCTGTGCCCGTCCTCCCCTCCCCACCATCTGCAGTGGAGGAACGTCAAAGACGAACTCTACAGTCAGAGGATGTGCTGCCtccagagaggaggaggaggaggaggaggacgaggcaGCTGATCTTCTTTGACCCGGAGACGCAGATCCCccaggaggagctgcagcagcagatagACAACCCTCTGTTTGAGACCAGACGTCCACTGTTCGCACCGCCTCCTTCTCACAGGATGCGCCCCGCTGCTGAGCTCCTCGAGAATCCCTGCCTGCCCTTCTTGCCTGAAGAGGTGTTGTTTCTATGGAGACGGGCTGCGACCATTAGGCCTCTCTCAGGCTTGGACCAGCAGGTTGGGCAGAGAGGGCCCGAGTCCACCGACTCTGAAAAGGAAAGAGAGCGCGAGATGGCTGAGGCCGCCGAAAGAGAAGAGGGGAAACTTGAGCTCCTGACGGAGgTCCCCAGAGATGTGGCAGAATCAGAGAAGTTGGATATTTCAGaacATGGTTCACTGCCGTTGGAGGGCTCCGACCAAAGGGAGGCGTCTCGAGAGATCATCTCCCCTATGTTCACACCCGAGAAAGAATGGTCCGCTGTCTCCAGGTCTGTTTCTACACTGCAGGACATCCCAGAGGCGGTGGACGAGTTGCTGGGGAGAGCTGCAGCAGAGTTTCCTCCTGGGCTGCTGCTGGATTTTCCCGAGCATGGAGAAGAACCTTTGCTGTTTCAGTCTCTTCTGCCACCAGAGGTCGACCGCAGAACTGTCAGCAACATTTTTCAGAGGCTCCTGGAGACTTTATCGGCCAGGAAACTACGTGCGGAGCAGGACGAGCCTTATGGTGACATATTAATATTACCTGGAGCCAACTACGAAGAGGGGAATCTGAATTTGTGATGTGTACACGGTCACTCGAGTCCCCACGAGCCTCCTAAACAAACATCATTGTTCAGTCTGGTAGAAGATTATTTGTCTGTTCCTGACATTTCCTGTGTTCACTTCATCCGAGAGAAAAAACATCTGGATTTAAAACAATGTCATACAAGACAAATATGCATAGAAGTCAAATGTTTAGTTACTAATCACTTCATAAGATTTGTCATTGGTGTGACCTGTTGACATGCTTGAAATTATTGAAGTTTTTAAAACCTGCTGGTTTGTATAATTTCCAAAAGCAAATCATTTGTCCCTTTTGCTACTGTGACCAACAAGTTTTATTAATTCTATGAGATTTCAGATGagtattttaactatttttatggttgtatttttttaaagacattacCTCATGTTAAGCTGCACAGAAGTTCTGGTTAATGTAAGTTATGTGTCCCTTTGAACAtgaactacaaaataaaaactttcgAAGA
>XM_039804824.1
TATTACATTTCTGAATATAGCCTATCTAATAGCAAAAAGACCAGGCTTTATTTTCAGTAGCTCACAGTAGCTGACCAATCGCCTTCTGAAACTAAAATAAACATTCATCTGCTTTCACACGTTGGACCAAACCCGCTCGGATCTAGAATAATATCTGCAATTCATCAGCTATTTAATCAATTTTCCGAAagattttctaaaatgttttacTACCCTACAGTTTTGAAGCGGCATACAGGATGTTTTTCTACAATCTGGCTGGTTGCTACAAAAGGCATCAGAGTTACTCGCCGGGATTTCCTAAAAGTCAACGTCCAAAGCACCTGTGATGACATCATGAGCTACGTGCTGGAGCAGGTACCACCCCCTCAGCCTGGTCTGCCACGACCTCGCTTCTCCCTCTACCTCTCCTCCCAGCTCCAGTATGGCGTCATCCTCGTCTATCACCGCCAGTGTGCTATTCTCCTTGCTGAACTTCAGTCCATCGTGGGCTATCTGTTAAAACAGAGGGCATCCCAGAAAATTGATATGGATGAGCACGGCAGACAAGCCCTGGACTACCCTGATGCCCTGTCTCTCCTGGAGGAGACAGAAGGAGCTCTTGACCCTTTATTCGGAGTGATGTACATGGGAAAGGCCATGCCCAGTCCTAATACACTGATACAGaTGGGTCAGGAGTATCCGAGAGAAAGCTCTCCTGAGCATCCTGAAATGACCAGTCcagcttctgctgctgcaccaGACAGTGGCATAACTGCAACTCCAGAAGCCATTActctgagagagacagagcctCTCACTATCCCTATTGCAGAGTTTGAGGGTGAGGAGCTTATCGATCAGCATCCAGAGACAATTGACTTCCTCTTGGCCCAAACGGATACCTTTCCAGAAGGAGATTTGGAGATGCCAAGAGAAGATGTGACACCAGGAGAGCAAGAGGCGGAGATGGAAAGGGGCGGAAGTGAGGAAGACCTGGAGAAACAGAGAACAAAAGAGCTCACAGGATCCTCTATCGAATTACAGCCCACCACTCTGTCCAGTGAGCACGCCACGTTGTTGCCTCAGGAAGAGCCAGACCTGGCCGTGGAGAAGCCTGGACCCCCCTCAGACCAGGTCACCCCCGTCTCTGTGCCCGTCCTCCCCTCCCCACCATCTGCAGTGGAGGAACGTCAAAGACGAACTCTACAGTCAGAGGATGTGCTGCCtccagagaggaggaggaggaggaggaggacgaggcaGCTGATCTTCTTTGACCCGGAGACGCAGATCCCccaggaggagctgcagcagcagatagACAACCCTCTGTTTGAGACCAGACGTCCACTGTTCGCACCGCCTCCTTCTCACAGGATGCGCCCCGCTGCTGAGCTCCTCGAGAATCCCTGCCTGCCCTTCTTGCCTGAAGAGGTGTTGTTTCTATGGAGACGGGCTGCGACCATTAGGCCTCTCTCAGGCTTGGACCAGCAGGTTGGGCAGAGAGGGCCCGAGTCCACCGACTCTGAAAAGGAAAGAGAGCGCGAGATGGCTGAGGCCGCCGAAAGAGAAGAGGGGAAACTTGAGCTCCTGACGGAGgTCCCCAGAGATGTGGCAGAATCAGAGAAGTTGGATATTTCAGGTCCGCTGTCTCCAGGTCTGTTTCTACACTGCAGGACATCCCAGAGGCGGTGGACGAGTTGCTGGGGAGAGCTGCAGCAGAGTTTCCTCCTGGGCTGCTGCTGGATTTTCCCGAGCATGGAGAAGAACCTTTGCTGTTTCAGTCTCTTCTGCCACCAGAGGTCGACCGCAGAACTGTCAGCAACATTTTTCAGAGGCTCCTGGAGACTTTATCGGCCAGGAAACTACGTGCGGAGCAGGACGAGCCTTATGGTGACATATTAATATTACCTGGAGCCAACTACGAAGAGGGGAATCTGAATTTGTGATGTGTACACGGTCACTCGAGTCCCCACGAGCCTCCTAAACAAACATCATTGTTCAGTCTGGTAGAAGATTATTTGTCTGTTCCTGACATTTCCTGTGTTCACTTCATCCGAGAGAAAAAACATCTGGATTTAAAACAATGTCATACAAGACAAATATGCATAGAAGTCAAATGTTTAGTTACTAATCACTTCATAAGATTTGTCATTGGTGTGACCTGTTGACATGCTTGAAATTATTGAAGTTTTTAAAACCTGCTGGTTTGTATAATTTCCAAAAGCAAATCATTTGTCCCTTTTGCTACTGTGACCAACAAGTTTTATTAATTCTATGAGATTTCAGATGagtattttaactatttttatggttgtatttttttaaagacattacCTCATGTTAAGCTGCACAGAAGTTCTGGTTAATGTAAGTTATGTGTCCCTTTGAACAtgaactacaaaataaaaactttcgAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804823.1 True 2492 mRNA 0.49 17 22643346 22651387
XM_039804824.1 False 2404 mRNA 0.48 16 22643346 22651387

Neighbor

gene id symbol gene type direction distance location
setdb1b setdb1 coding upstream 268 22629617 ~ 22643078 (+)
LOC120561960 NA coding upstream 15814 22627347 ~ 22627532 (+)
cers2b cers2,LOC108241136,LOC102789054,LOC101467232,LOC102212238 coding upstream 36418 22589127 ~ 22606928 (+)
adamtsl4 LOC104944899,LOC101074756,LOC106573456 coding upstream 87054 22519118 ~ 22556292 (+)
tars2 NA coding upstream 136849 22490753 ~ 22506497 (+)
clk2b LOC104944907,LOC101465036,LOC102211389,LOC100710865,LOC102298503,LOC102787711 coding downstream 251 22651638 ~ 22657098 (+)
LOC120562535 LOC103478110,LOC102236274,LOC103136813,LOC106922010,LOC106957061,LOC107088793 coding downstream 16529 22667916 ~ 22674134 (+)
pklr LOC100711399,LOC101487503,LOC102296262,LOC108235536 coding downstream 22890 22674277 ~ 22687960 (+)
zbtb7b LOC104949237,LOC102209066,LOC102295659,LOC100711944 coding downstream 58752 22710139 ~ 22732441 (+)
LOC120562542 LOC100712213,LOC102785254,LOC101485676,LOC102294439 coding downstream 81940 22733327 ~ 22740710 (+)
G74769 NA non-coding upstream 387868 22255271 ~ 22255478 (+)
G74765 NA non-coding upstream 397583 22245489 ~ 22245763 (+)
G74764 NA non-coding upstream 400313 22242817 ~ 22243033 (+)
G74760 NA non-coding upstream 459309 22183783 ~ 22184037 (+)
G74737 NA non-coding upstream 513432 22129652 ~ 22129914 (+)
G75042 NA non-coding downstream 267365 22918752 ~ 22920103 (+)
G75045 NA non-coding downstream 273205 22924592 ~ 22925155 (+)
G75065 NA non-coding downstream 331505 22982892 ~ 22987322 (+)
G75069 NA non-coding downstream 343033 22994420 ~ 22994706 (+)
G75077 LOC104960445 non-coding downstream 365420 23016807 ~ 23018595 (+)
arnt NA other upstream 17393 22610018 ~ 22625953 (+)
celf3b LOC104944900,LOC100708447,LOC107088821,LOC107379582 other upstream 57774 22559944 ~ 22585572 (+)
rprd2b NA other upstream 153402 22469978 ~ 22489944 (+)
rusc1 LOC104958857 other upstream 330826 22264939 ~ 22312520 (+)
LOC120562537 NA other downstream 9092 22660479 ~ 22667885 (+)
LOC120562539 LOC102295960,LOC100711672,LOC102209551,LOC101487210,LOC102786116 other downstream 37683 22689070 ~ 22705416 (+)
myh14 NA other downstream 134191 22785578 ~ 22820053 (+)
cnot3a cnot3 other downstream 248702 22900089 ~ 22911520 (+)
LOC120562293 LOC103360151,LOC102310947,LOC102785150 other downstream 419200 23070587 ~ 23083147 (+)

Expression


Co-expression Network