wnt4b (LOC104932544,LOC103356104,LOC101479331)


Basic Information

Item Value
gene id wnt4b
gene name LOC104932544,LOC103356104,LOC101479331
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 23998435 ~ 24002544 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804861.1
gggggggggggtatagaTATAGATTCTACTGATATGTTCAATTAAATTGGACATGTGGACTTATTTTGTGTCTAAAGGATGAGCATGCTTTTGCTGTCACTGACAGCACAAGTGAAGAAACTGACGAACATCTTTGTTGATTAAAATTGGGATTCAATTTAAATTTGATCAACTCAATATCAAAAAGAAGAATAACTGGATACCACAGGACTACGAACTGATATGCGGGGATCATCCCCAGACTCTGGACCAGAAACATAAAGCAACACCAcaacaagcagacagacagatcacTTTGACCGTGGAGACGGGCAGCGTGCTGTCCAAAGACCCAGCCTGACGCACggagacggacagacagacagacagtctgaTGCCAACTGTCTCCACTGTCAATCTCACGGCACcactcctcctcctgttgcTATGGGCAACCCAACCCACCATGGCAACCAACTGGCTCTCCCTGGCGAGGTTGCCTCGCTCCAGGCCCGTGTCCGGTGCTGCCCCATGTGCACGGCTGAGGGGGCTGACCCCAGGGCAGGTGGGGGTGTGCAGGGCGCGAGGGGAGGTCATGGAGTCCGTACGCAAGGCAGCCGAGATGGTCATGGAAGAGTGCCAGCACCAGTTCAGGAACCGCCGCTGGAACTGTTCCACCACCACACGTGGGATCAATGTATTTGGCCGAGTCATGAACCAAGGGACTCGTGAGGCGGCCTTTGTGCATGCTTTGTCGTCGGCAGCCGTGGCAGTGGCTGTGACCCGAGCCTGCACCCGCGGGGAGCTGGAGAGGTGTGGCTGTGACAGGAAGGTCAGGGGGGTCAGCCCCGAGGGCTTCCAGTGGTCAGGGTGCAGTGACAACCTGTCCTATGGTGTGGCTTTCTCCCAAACATTTGTGGATGAACCAGAACGAGCCAAGGGGCTGTCAGCGGGGCGACCACTCATGAACCTCCATAACAACGAGGCTGGCCGAAAGGCCATCCTTCACAACATGCAGCTGGAGTGCAAGTGTCATGGCGTCTCCGGCTCCTGTGAGTTGAGGACCTGCTGGAAGGTTATGCCTCCATTCAGACGCGTCGGTGTTGTGCTCAAGGAACGCTTTGATGGAGCCACGGAGGTTCGCCTGACTCGTATCGGATCCAGGACAGCTCTGCTTCCCCGTGACCCCCAAGTCAAACCCCCTGCTGCCAGAGACCTTGTGTACCTTGCGCCCTCCCCAGATTTCTGCCATCTCGACCCTGACAACGGAATCCCTGGGACCGCTGGTAGGAGATGTAACGGAACCTCTCGGCTGGCACCAGACGGCTGCGAGCTGGTGTGCTGCGGGCCAGGGTACAGAGCGGGCCGGGCTGAGGTGGTGCAGCGCTGCTCCTGCAAGTTCTCCTGGTGCTGCTCAGTCCGCTGCGAGCAGTGCAAGAACACAGTCACCATTCACACCTGTAGAGTCTAAGAGGGCCCCAAACAAGACCAAACCGACAGAGCAGAAAGACCAAACAACAAACCACCTGACACAAGATGGGATGAGGACAACATAGGCAATAACCGTTTCTAATTTACATCTTTAGCGCcaaattattttagattttgGTCTTAATTTAACTCATTTTCGAGTGAAGCAGTTAAGTTTGAGGATTCTGTTGTAAAAGCTGACAAAGTTAGAGCATGTGTAAAAAGCAAAGCAAAGAACAATTACATCAACACTAAGGTACAAACAAAAATCACCCTCGGAGACGGACAGGTGGGccgacatgcatgcacacaaatacacatcaacacacacacacactcaaaagtTAATCTCACATTGAACTGACAAAGCTTTTAAAGCGGAACCTAACCACAACTAACAGGGAAACATTGCAGCACTATTCTTATTTTATGCAAACTTTTTTGCGCTGTCATAGACTAGCAggtctttgaactttactgtATTTATGTCTTCTTCTCTATTctcgtttatttatttttatatctgAGTCTTGCTTCACTTCAGCAATATCTTAAATAGCAAATATAACTTCTACTTACATCAgtgtctgtcttgtgttttgTCACCTCACCTTCATGTGAAACTCTTCTGGATGTTCCTGCACAAGCAGTGCTTTTAGGTCTGTTCAAGAAATCTAATAAATACAGTAGTTTTATCCAAAA

Function

NR:

description
PREDICTED: protein Wnt-4-like

GO:

id name namespace
GO:0007275 multicellular organism development biological_process
GO:0016055 Wnt signaling pathway biological_process
GO:0005102 signaling receptor binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804861.1 True 2151 mRNA 0.50 9 23998435 24002544

Neighbor

gene id symbol gene type direction distance location
LOC120562185 NA coding upstream 60614 23921770 ~ 23937821 (+)
mrpl51 mrpl51,LOC102789637 coding upstream 126721 23869637 ~ 23871714 (+)
plekhg6 NA coding upstream 140157 23844077 ~ 23858278 (+)
tnfrsf1a NA coding upstream 154476 23836781 ~ 23843959 (+)
si:dkey-260g12.1 NA coding upstream 168750 23823324 ~ 23829685 (+)
mlf2 mlf2 coding downstream 8339 24010883 ~ 24019095 (+)
LOC120562699 eno2 coding downstream 17351 24019895 ~ 24025854 (+)
LOC120563208 NA coding downstream 51728 24054272 ~ 24054328 (+)
clstn3 clstn3,LOC102784285 coding downstream 71539 24074083 ~ 24098119 (+)
pex5 pex5,LOC102783438 coding downstream 97277 24099821 ~ 24113212 (+)
G75493 NA non-coding upstream 22701 23972327 ~ 23975734 (+)
G75483 ptpn6 non-coding upstream 50032 23943493 ~ 23948403 (+)
G75427 NA non-coding upstream 113804 23883177 ~ 23884631 (+)
LOC120561968 NA non-coding upstream 364601 23631416 ~ 23633834 (+)
G75301 NA non-coding upstream 503958 23494213 ~ 23494477 (+)
G75517 NA non-coding downstream 25339 24027883 ~ 24031339 (+)
G75523 tpi1,tpi,LOC102304959 non-coding downstream 46381 24048925 ~ 24052956 (+)
G75582 gnb3,LOC103375278 non-coding downstream 116773 24119317 ~ 24122009 (+)
G75583 NA non-coding downstream 119483 24122027 ~ 24125081 (+)
G75611 NA non-coding downstream 213596 24216140 ~ 24216569 (+)
LOC120563047 vamp1,LOC104928996 other upstream 119020 23873909 ~ 23879415 (+)
LOC120563204 NA other upstream 185027 23768233 ~ 23813408 (+)
casp2 casp2,LOC102795506,LOC103369458 other upstream 346939 23641555 ~ 23651496 (+)
trpv6 LOC104929027,LOC104960406,LOC103388006,LOC107082237 other upstream 427192 23560848 ~ 23571243 (+)
LOC120562612 LOC103367657,LOC105025867,LOC103136704 other upstream 504401 23491125 ~ 23494034 (+)
atn1 atn1 other downstream 24371 24026915 ~ 24039427 (+)
lpcat3 lpcat3 other downstream 53893 24056437 ~ 24073698 (+)
G75644 NA other downstream 432595 24435139 ~ 24436819 (+)
dedd1 dedd2 other downstream 518191 24520735 ~ 24534276 (+)
grik5 grik5 other downstream 803745 24806289 ~ 24885373 (+)

Expression


Co-expression Network