rnf183


Basic Information

Item Value
gene id rnf183
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 28998228 ~ 29000667 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804895.1
CATAAGAAAATGCAGCTGTATTAACACGCAGAGCGGCCTTAAAGGAACGCTGGAATATCAGTAGTATATGGGTTCTGATGTGTGTGGTTATCTAGGCTGTGACCTGCTTATGCACATGCAACACTGGCTCACTACAGCTGGTCCAACTGGTCTGacgagaaaagaaaaaggaggaggaagcaGCGAGGAGGAGGGTTCACAGGAGGAAATGCTGTGGTACAGTTAGAAAACAAGAAATCTACAAACAGAAGAGGAGAACAGGGATTGCAGAGAGACCAGAGTTAAATTGTTAAGTTTGGTGATGCTTATTTTTACTATACTGACACACCAAATGTTTATTTCACTTGTGAGATCATCTCTGACGAGGTTATCCGACATCCAATCTACCTCAGCAGCTCCAGTTGGGAAACAGAATTAGATTCCAGCCGGCACTCTACCTCTAACATCATCCCTCCAACATGAGCAATGACGAGGAGAGACACAGCCATGGAGCCAGGCAGGCCCCCAACGTCAAACCCACGCTCCACCAGACTGAGAGCAACAGCAAGGGCGACACGTGGAAGAAGGTCAGGCCTGCTACAGTGAGGAGGTCGAGGAGTACCGACTCGGAGAGGGGGGAAAGAGGCAGGAGGAGAGAACGAGACAGCAGGCACCAGGGAGAGGGGAGGCAGCGGGGGAGGAGTGAGGAGGCCCGGAGGAAGGTGAAACCCCCTGAAGATGATGTGCAGGACACTGAGTGCGCTGTGTGTTTTTGCACATACGATAACATCTTCAAGACCCCAAAGCTGCTGGTGTGCGGTCACACTTTCTGTCTGGAGTGCCTTGCTCGCATCAACGTGACCTCTCCTGAGCTCAAGACCCTGTGCTGCCCCGTATGCCGTGAGCTGACCGAGCTCCCCCACGGCCAGGACCTGCCCCGGCTGGGCAACAATGAGTACATCATAAGCAAACTCCCAGCAGACATGCAGAGGGCACTGTCCATCCGCTTCCAGCGTGGCAAGGGCAAACTGTTCCTGAAGAACCCTCCTCCCAAAAGCCCGATCAGGTCTAACATCCTCACCCTGCCTAAAAAGAGTCACGGTGGCCTGGTGACAGCAGGTGGTGACCTCCACTTGACCGCCATGGAGCAGGGAATAGCCCCGACCACTGTGGTGAACGTAGGCAGGCCTCCAAACAGGGTCAGAGGTCGCATGCGCAGGTTGTTCCGCTCGGACCGGTGCTACTACGTCGTGGTGGGGTCCATCGTCACCGTCACTGTGGCACTCATGCTGGTGGGGATTCTGGCCTTTGTAATCATACCGAATGTGATTGGACAGAGGCCAGCAGGGAACAACATGTCACAGGGTACCGCAAATACAGGCAATCCAGGCAATCCAGGATTAAGACCCTGAAGGGGTCACAGGTGGGCAGGCTGTAAAGATGAGACTTAAGGGGAGAAAGAGAATATGACTCCTTCTGATTCTCAGTGATCATTTTGCCTGCTTTTGTTCTATTGGTGAATGAAAAACTTAAGCACTGGAAAACGTTCAGGCCAGGCCAGTTCAGTGAAGCGAAGGAATGAAGGAAAACAAGGGCAccgaaattttttttaaacggacACACCAACTCAAAGTTGCACGTGGGAAATAAACAGGGAGAACAGGGCAAACCtgcaaattttttttgttgttgttgtttttgctctTTTCTGAACATGTTTGTAATTAATGTGAAAGCCAAATATag

Function

NR:

description
PREDICTED: RING finger protein 225-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804895.1 True 1725 mRNA 0.51 2 28998228 29000667

Neighbor

gene id symbol gene type direction distance location
dhx16 dhx16 coding upstream 794 28981531 ~ 28997434 (+)
fli1rs LOC104940799,LOC103372032,LOC104935032 coding upstream 60465 28918527 ~ 28937763 (+)
LOC120562583 NA coding upstream 94431 28898084 ~ 28903797 (+)
LOC120562582 NA coding upstream 103817 28890050 ~ 28894411 (+)
trnaa-ugc_7 NA coding upstream 151445 28846712 ~ 28846783 (+)
LOC120563046 NA coding downstream 1969 29002636 ~ 29004810 (+)
mgat1a mgat1,LOC104964845 coding downstream 3958 29004625 ~ 29007832 (+)
sh3bp5la LOC104964842,LOC103356806 coding downstream 7906 29008573 ~ 29019134 (+)
gabbr1a gabbr1,LOC103356805 coding downstream 18980 29019647 ~ 29082136 (+)
bag6 bag6,LOC104960485 coding downstream 129642 29130309 ~ 29146625 (+)
LOC120563088 NA non-coding upstream 46704 28943905 ~ 28951524 (+)
G76885 NA non-coding upstream 55502 28941062 ~ 28942726 (+)
G76887 NA non-coding upstream 57873 28939209 ~ 28940355 (+)
G76859 NA non-coding upstream 117040 28880973 ~ 28881188 (+)
LOC120562350 NA non-coding upstream 155958 28836396 ~ 28842270 (+)
G76935 NA non-coding downstream 15209 29015876 ~ 29085487 (+)
G76969 NA non-coding downstream 126288 29126955 ~ 29127212 (+)
G76995 NA non-coding downstream 296291 29296958 ~ 29302135 (+)
G77004 NA non-coding downstream 313432 29314099 ~ 29314625 (+)
G77014 NA non-coding downstream 362566 29363233 ~ 29365430 (+)
LOC120562342 NA other upstream 162860 28800650 ~ 28835368 (+)
G76714 NA other upstream 428362 28553572 ~ 28569866 (+)
G76707 NA other upstream 476606 28520699 ~ 28521622 (+)
LOC120562434 NA other upstream 581473 28414518 ~ 28416755 (+)
drd2l LOC108240316,LOC107379306,LOC103372392 other upstream 582575 28388097 ~ 28415653 (+)
pear1 LOC104932170 other downstream 179163 29179830 ~ 29244092 (+)
mex3a mex3a other downstream 275480 29276147 ~ 29288548 (+)
G77009 ubqln4 other downstream 328122 29328789 ~ 29330258 (+)
LOC120562177 LOC104942602,LOC104934039,LOC103362363 other downstream 383468 29384135 ~ 29390053 (+)
G77028 LOC104942601 other downstream 403341 29404008 ~ 29412413 (+)

Expression


Co-expression Network