LOC120561707


Basic Information

Item Value
gene id LOC120561707
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 14600889 ~ 14603683 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804905.1
CTCACCATGGTGGTCATCAGTGGAATAAGTGAGAATCCAGAAGACTTACCAAAATCTACTACAGCACCCTTCACTAGTAGCATCACTGTAAGCCTCCCAGAATACTACAGTGACTGTGACTACCCTGAGGGTGACTCCGGGAGGTGTGTGTATGAGCGTTATGGAGCCAATTTTATTCCCACCCTCTACGCCAGTTTCTTCCTCCTGGGCCTTCTGGGTAACTCTTTGGTCATCTGGGTCATTGCTTGTGGCGTGCGACTCCGCAGCATGACCGACGTGTGCCTCCTAAACTTGGCTGTTGCTGACCTTCTCTTGGTGTGTACCCTTCCCTTCCTTGCCCACCAAGCCCGGGACCAGTGGCTGTTTGGGGATGCTATGTGCAAAGCGGTCCTTGGTATTTATAATATTGGTTTTTACAGTGGGATCTTTTTCATCACTCTAATGAGCATTGACCGGTACTTGGCTATAGTACAGGCCATTTACGCTATGAGAGTACGGACAAGGTCCTTTGGAATGATCGCAGCGGCTGTTACATGGGTGGCTGGATTTTTGGCTTCTTTCCCTGAAATGATCTTCCTCAAAGAGCAGCCTGATGTGAATACTAATATGACTCAGTTTTTCTGCTACCCTGTATATCCCACAACTTCGAATGACGACACCACTTCATCCAACTCTCACATCTGGAGCATCTTcagcctttttaaaatgaactttttggGTCTATTTGTCCCGGTAGTCATCATGGGTTTCTGCTACTCACAGATTGTCTGGAGGCTGCTGCACAGCCCGTCATCCAAGAAACAAGCCATCCGTTTAGTGCTCATAGTGGTAGTTGTTTTCTTCTGCTGCTGGATCCCCTACAACATTGCATCCTTCTTCAAAGCATTGGAGCTATTGCACATCTATACAGAATGTGAAAGCAGCAAAGCCATCAGATTGGCTTTACAAGTCACTGAGGCCATTGCCTACTCTCACAGCTGCCTCAACCCCAtcctgtatgtgtttgttgggGAGAAGTTCAGGAGGCACCTGCTAAGGTTGATAAACAGGGCTCCCTGCAGGCTGTGTCAGATGGTCAAAGTCTGCATACCCCAGGACAGAATCAATGGGTCAGTCTACTCACCGACCACCAACCTGGGCAAGAGGAGCACTGCTGTGTGAAGTGTGTTCCATAGACGGTATAAAGGTGGGTTgttatttctgtctgtgtggtcATCTCCACAATGAGGGAATTTCTTGTGAAGTCAAATAGTGAAGTTGAGAAGCAATTCTTGCTAATTCTGACTTCTTATGGGCTATTTTAGGACTTCAGTTCATTTTTCACTCACAATTGGCTTTAGTTTGAGTTTTGGAAATGTAAGAATATGACAAAATACATACAAGACACAAGCCTAAATCTTAAATCCTATGGTATGATTTTGTAATAGAGTAACATGCAAACACAGTGTAGCCGTGTATAAAGGTAAAGGTATATATCTTTATACTTTTATAAGTTCTATAGACTACATAAGAATGTACAATggaaatgtactgtaaatatggTTCCGGATAGATAAGATCTTTAACAGAGTTGATGAAGCAGATTGTATCTGCAATTTTAAAGGTCATAAATAGTCCTGAAATAAATtttgtcttctctttttttttgggggggggacacaAACTCAGATGCTGACCAGTTCCTTGCAGGACAAACACCAGTAAAAGAAGTGAAACAAATAGCTAAACATGGCtaattgcaacaacaaaaaagcaaagctTTTGCAAGTATTGTAAGTTTCAAAGCATCTGTAATAGCAGATTTGCACCTCACCTCAACCTAGAGAAAACCACAACATGATAGAAAGCGGAAGTATATGTTGTCAGTTTAATCTTTGCAGTCTCTGTGCACGAATTTGCATTTTGCTGTCAATTTTTGGAACTATCTCTGCAAAACTTCTAATGAAATTAATCAGcatttcaccaaaacaagtcatTTTCAAATCATTATACTCTATATTCTATCATGCAGACTGACTAGCCAAGTGGATATTATGCATACCATATCCTAACTACAACATCCTTGGTTTGATTCAAGtttacccccaccccca
>XM_039804906.1
CTCACCATGGTGGTCATCAGTGGAATAAGTGAGAATCCAGAAGACTTACCAAAATCTACTACAGCACCCTTCACTAGTAGCATCACTGTAAGCCTCCCAGAATACTACAGTGACTGTGACTACCCTGAGGGTGACTCCGGGAGGTGTGTGTATGAGCGTTATGGAGCCAATTTTATTCCCACCCTCTACGCCAGTTTCTTCCTCCTGGGCCTTCTGGGTAACTCTTTGGTCATCTGGGTCATTGCTTGTGGCGTGCGACTCCGCAGCATGACCGACGTGTGCCTCCTAAACTTGGCTGTTGCTGACCTTCTCTTGGTGTGTACCCTTCCCTTCCTTGCCCACCAAGCCCGGGACCAGTGGCTGTTTGGGGATGCTATGTGCAAAGCGGTCCTTGGTATTTATAATATTGGTTTTTACAGTGGGATCTTTTTCATCACTCTAATGAGCATTGACCGGTACTTGGCTATAGTACAGGCCATTTACGCTATGAGAGTACGGACAAGGTCCTTTGGAATGATCGCAGCGGCTGTTACATGGGTGGCTGGATTTTTGGCTTCTTTCCCTGAAATGATCTTCCTCAAAGAGCAGCCTGATGTGAATACTAATATGACTCAGTTTTTCTGCTACCCTGTATATCCCACAACTTCGAATGACGACACCACTTCATCCAACTCTCACATCTGGAGCATCTTcagcctttttaaaatgaactttttggGTCTATTTGTCCCGGTAGTCATCATGGGTTTCTGCTACTCACAGATTGTCTGGAGGCTGCTGCACAGCCCGTCATCCAAGAAACAAGCCATCCGTTTAGTGCTCATAGTGGTAGTTGTTTTCTTCTGCTGCTGGATCCCCTACAACATTGCATCCTTCTTCAAAGCATTGGAGCTATTGCACATCTATACAGAATGTGAAAGCAGCAAAGCCATCAGATTGGCTTTACAAGTCACTGAGGCCATTGCCTACTCTCACAGCTGCCTCAACCCCAtcctgtatgtgtttgttgggGAGAAGTTCAGGAGGCACCTGCTAAGGTTGATAAACAGGGCTCCCTGCAGGCTGTGTCAGATGGTCAAAGTCTGCATACCCCAGGACAGAATCAATGGGTCAGTCTACTCACCGACCACCAACCTGGGCAAGAGGAGCACTGCTGTGTGAAGTGTGTTCCATAGACGGTATAAAGATGCTGACCAGTTCCTTGCAGGACAAACACCAGTAAAAGAAGTGAAACAAATAGCTAAACATGGCtaattgcaacaacaaaaaagcaaagctTTTGCAAGTATTGTAAGTTTCAAAGCATCTGTAATAGCAGATTTGCACCTCACCTCAACCTAGAGAAAACCACAACATGATAGAAAGCGGAAGTATATGTTGTCAGTTTAATCTTTGCAGTCTCTGTGCACGAATTTGCATTTTGCTGTCAATTTTTGGAACTATCTCTGCAAAACTTCTAATGAAATTAATCAGcatttcaccaaaacaagtcatTTTCAAATCATTATACTCTATATTCTATCATGCAGACTGACTAGCCAAGTGGATATTATGCATACCATATCCTAACTACAACATCCTTGGTTTGATTCAAGtttacccccaccccca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804905.1 True 2093 mRNA 0.42 2 14600889 14603683
XM_039804906.1 False 1611 mRNA 0.45 3 14600889 14603683

Neighbor

gene id symbol gene type direction distance location
si:cabz01093077.1 NA coding upstream 6905 14590243 ~ 14593984 (+)
LOC120561614 NA coding upstream 12437 14584035 ~ 14588452 (+)
zgc:110410 LOC104941306 coding upstream 531941 14058640 ~ 14068948 (+)
LOC120562882 LOC104926221,LOC103388613,LOC103353832 coding upstream 979545 13609618 ~ 13621344 (+)
LOC120561886 LOC103353818,LOC102295432,LOC102785128,LOC101482972 coding upstream 1182437 13414324 ~ 13418452 (+)
LOC120561930 NA coding downstream 269 14603952 ~ 14607904 (+)
LOC120561617 NA coding downstream 8229 14611912 ~ 14619881 (+)
LOC120562066 NA coding downstream 99740 14703423 ~ 14704824 (+)
dnah5 dnah5 coding downstream 158687 14762370 ~ 14874113 (+)
trnae-cuc_16 NA coding downstream 422899 15026582 ~ 15026653 (+)
G72520 NA non-coding upstream 82992 14514667 ~ 14517897 (+)
G72466 NA non-coding upstream 437145 14163536 ~ 14163744 (+)
LOC120561831 NA non-coding upstream 513093 14086603 ~ 14087796 (+)
G72319 NA non-coding upstream 1067887 13532125 ~ 13533002 (+)
G72314 NA non-coding upstream 1117778 13475370 ~ 13483111 (+)
G72551 NA non-coding downstream 301 14603984 ~ 14604638 (+)
G72559 NA non-coding downstream 29397 14633080 ~ 14633375 (+)
G72560 NA non-coding downstream 30494 14634177 ~ 14635023 (+)
G72561 LOC103365327 non-coding downstream 34187 14637870 ~ 14640768 (+)
LOC120562067 NA non-coding downstream 40693 14644376 ~ 14645788 (+)
G72506 NA other upstream 174709 14425794 ~ 14426180 (+)
LOC120562174 rbms3,LOC101066789,LOC103370884 other upstream 230798 14175817 ~ 14370091 (+)
cmc1 cmc1 other upstream 456593 14133584 ~ 14144296 (+)
LOC120561928 csmd3,LOC101478087,LOC108232275,LOC102799137,LOC102309299,LOC102195523 other upstream 554753 13754053 ~ 14046136 (+)
LOC120562711 eif3h other upstream 912375 13624448 ~ 13688514 (+)
LOC120561718 LOC107101581 other downstream 22795 14626478 ~ 14632721 (+)
irx4a LOC103360443,LOC102233360,LOC103478376,LOC108232226,LOC101474805,LOC102784018,LOC102295185,LOC102202030,LOC104961814,LOC103145173 other downstream 949781 15553464 ~ 15560292 (+)
G72750 LOC104952694,LOC106925895 other downstream 1414676 16018359 ~ 16072201 (+)
G73031 LOC103366415 other downstream 2845902 17449585 ~ 17452568 (+)
ubxn11 NA other downstream 2852960 17456643 ~ 17461118 (+)

Expression


Co-expression Network