si:cabz01093077.1


Basic Information

Item Value
gene id si:cabz01093077.1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 14590243 ~ 14593984 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804907.1
tttatgtttatgttaatTGAGTAATCATTGAATTATTTTGTTGATAGTATGATGCCATCTAGTCACGCTGATTTTTTACATCTATTCTCTCTTTACATGAAGGACCACAAAGGTTTTTGTCTATATTGGATgattctacatattttgttatTAAGTTAAGTAATCTCTGCATGTTCTGTTCCTCCTTACACAGCAGTATGAACATATCCGAGAACGAGACATTAATGTACTTGGACATGTATGATTATCATGACACCTGCGATCAGGATCTCGTTCCAGGATTGCCCAATGGATCCACGTTCTTGTCCGTTCTTTACTACATACTGTTTTGTCTAAGTCTGCTAGGCAACGCCACCGTTCTCTGGGTTCTCCTCCGGTATATAAAGCTGAAGACTATGGCGGACATATGCCTCCTCAACCTGGCCCTGTCGGACCTCATACTGGCTGTATCACTGCCCCTCTGGGCCTACAATTCCCAGAACCTTGCATCATGCAAACTGATGACAGGAGTCTATCAGTTGGGTTTCTACAGTGGTACGCTGTTTGTGACCCTAATGAGTGTGGACCGCTACCTGGCCATCGTCCACGCTGTTGCAGCCATGCGTGCCCGGACACTTTGCTATGGAATCATAGCCAGCATCACTATCTGGGCTATATCGGTCGTCATGGCAATCCCTGGGGTGATCTTTGCCTCCTTGGAGCTAGTAGATGCAGATAGCAACAGCTACGAGTGCCAGCCACTGTATCCAGAGGACTGGCAGCAGTTTTGGAAGATGCTGCGAAACTTGAACGAGAACACCGTGGGCCTTTTCGTGGGTCTCCCTATCATGATTTTCTGCTATGTGAAAATCCTTTTTGTGCTGTCCAGGTCCAGGAACTCCAAAAAGAACAGAGCTGTAAAGCTGATATTCatcatagtgtgtgtgtttgtggtgtgctGGGTCCCCTACAACGTCACAGTTTTCCTTCAGACACTGCAGCCGTTCGTGGACACCCTAAACAACTGCAAGGCTTCAAAATATATCGACTCTGCCATAGGCTTTGCTGAGATCATTGCACTGACTCACTGCTGTGTAAATCCACTCATCTATGCACTCGCAGGGGAAAAGTTTAGGAAGAAACTGGGCTATGTGCTGACTAGGTACTTCTGCCAGAGCAGAGGGACTTTCAGCCACAGAGACACCACAGACACTTCCAACACACCCGTAAAATCAGATTATTAAGAATGATAAACACAACTTGCTACAAAGAtggcaaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgctaaaaGCTGTAAAATGGTACTATGGATTGGTTTGAACAAAGGAATGTTTAGTCTATAGAATCTTATGAACACATTACTTAAAATCATGTAATTCAAAGTATATTCAAAACGTGtgaaaatatattgtttttgtaaaataaagaaagtaaacttga
>XM_039804909.1
CATATTAACATACATTTCTCGGAAAACCACAATGACACCTCTGTGCAGTTTTAACACGATGCGGAGGAAACAACAAAACCAAGAGTTCTCCTTACCAGAAACGAGCTCTGCAGCAGGATTTGACACAAAAAGCGAGCAATGCACGTTGACAGGATGCTTTGTAAGCTTGATGCACAGCAAAAGAGCACACAAATTCAAGAGCAGTGATTTGGGGAGACATTACGCAGTATGAACATATCCGAGAACGAGACATTAATGTACTTGGACATGTATGATTATCATGACACCTGCGATCAGGATCTCGTTCCAGGATTGCCCAATGGATCCACGTTCTTGTCCGTTCTTTACTACATACTGTTTTGTCTAAGTCTGCTAGGCAACGCCACCGTTCTCTGGGTTCTCCTCCGGTATATAAAGCTGAAGACTATGGCGGACATATGCCTCCTCAACCTGGCCCTGTCGGACCTCATACTGGCTGTATCACTGCCCCTCTGGGCCTACAATTCCCAGAACCTTGCATCATGCAAACTGATGACAGGAGTCTATCAGTTGGGTTTCTACAGTGGTACGCTGTTTGTGACCCTAATGAGTGTGGACCGCTACCTGGCCATCGTCCACGCTGTTGCAGCCATGCGTGCCCGGACACTTTGCTATGGAATCATAGCCAGCATCACTATCTGGGCTATATCGGTCGTCATGGCAATCCCTGGGGTGATCTTTGCCTCCTTGGAGCTAGTAGATGCAGATAGCAACAGCTACGAGTGCCAGCCACTGTATCCAGAGGACTGGCAGCAGTTTTGGAAGATGCTGCGAAACTTGAACGAGAACACCGTGGGCCTTTTCGTGGGTCTCCCTATCATGATTTTCTGCTATGTGAAAATCCTTTTTGTGCTGTCCAGGTCCAGGAACTCCAAAAAGAACAGAGCTGTAAAGCTGATATTCatcatagtgtgtgtgtttgtggtgtgctGGGTCCCCTACAACGTCACAGTTTTCCTTCAGACACTGCAGCCGTTCGTGGACACCCTAAACAACTGCAAGGCTTCAAAATATATCGACTCTGCCATAGGCTTTGCTGAGATCATTGCACTGACTCACTGCTGTGTAAATCCACTCATCTATGCACTCGCAGGGGAAAAGTTTAGGAAGAAACTGGGCTATGTGCTGACTAGGTACTTCTGCCAGAGCAGAGGGACTTTCAGCCACAGAGACACCACAGACACTTCCAACACACCCGTAAAATCAGATTATTAAGAATGATAAACACAACTTGCTACAAAGAtggcaaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgctaaaaGCTGTAAAATGGTACTATGGATTGGTTTGAACAAAGGAATGTTTAGTCTATAGAATCTTATGAACACATTACTTAAAATCATGTAATTCAAAGTATATTCAAAACGTGtgaaaatatattgtttttgtaaaataaagaaagtaaacttga
>XM_039804910.1
CATATTAACATACATTTCTCGGAAAACCACAATGACACCTCTGTGCAGTTTTAACACGATGCGGAGGAAACAACAAAACCAAGAGTTCTCCTTACCAGAAACGAGCTCTGCAGCAGGATTTGACACAAAAAGCGAGCAATGCACGTTGACAGGATGCTTTGTAAGCTTGATGCACAGCAAAAGAGCACACAAATTCAAGAGCAGTGATTTGGGGAGACATTACGGTAAgcacaacattttttaaatgtttagctGCTATTTACTAGACCTTCTTCACCTCTCTCACCTCCTACACTTATAAACACAGTGGGTAGTTGAGGATTGtgtatgcacgtgtgtgtgtaaacGTCAGCCACAGGAAGTGAGGGTCGGCATGGGTGTCAAAGCACGTGGTGCTGCATATGTTGATAGTGAGAGAAATAGGCTTGAGATGTGGTTTAAAAGAGATGACATGAATTTGATTATGGTCGGAGTAGGAGGAAGTTTGTGATATTCATAGACAGATGCGTATTAATGCTACATCTAGACTGGTGATAGGTTGTTTATAATGTACAGTACTTCTGACATTATTGCATTCAGAGGGAGAAAGTCAATAATGGGAAGTTAACACATGCTCTAGTAAACACCAACATTCTTGTTATTGCTATGGCTATCTTTCAGATTTGGAAAATTGTTTCTTAGGTTTCAACTTTGAAGTTGAACTTTGTTTTCAGAAGCCTTTCAGGCATGACTCACTAAATGATGATAATGTGAAAGGTTGGACTTAAAGGGCAGGAAAGTCCAGTAACATCTCTAAATTCCCTAACATCACacgtgaatttttttttcttttaatacttTGAAGCTTTTATCTGTACAAAATGTTCAGTGTGAAACATATAGAATTCAGTCATCATGATGGGAGGACATTGTATCTATCAGAATAAAGAGGAAAAACATCTGCCATTTCTATTTCTTGAAGATTTGTGAGTGGAGGAGCACATGAATGGAAGAAAATAGAATCAGGAGTCAAAAGATCTTGTAGAAAACGTAGCAGTATGAACATATCCGAGAACGAGACATTAATGTACTTGGACATGTATGATTATCATGACACCTGCGATCAGGATCTCGTTCCAGGATTGCCCAATGGATCCACGTTCTTGTCCGTTCTTTACTACATACTGTTTTGTCTAAGTCTGCTAGGCAACGCCACCGTTCTCTGGGTTCTCCTCCGGTATATAAAGCTGAAGACTATGGCGGACATATGCCTCCTCAACCTGGCCCTGTCGGACCTCATACTGGCTGTATCACTGCCCCTCTGGGCCTACAATTCCCAGAACCTTGCATCATGCAAACTGATGACAGGAGTCTATCAGTTGGGTTTCTACAGTGGTACGCTGTTTGTGACCCTAATGAGTGTGGACCGCTACCTGGCCATCGTCCACGCTGTTGCAGCCATGCGTGCCCGGACACTTTGCTATGGAATCATAGCCAGCATCACTATCTGGGCTATATCGGTCGTCATGGCAATCCCTGGGGTGATCTTTGCCTCCTTGGAGCTAGTAGATGCAGATAGCAACAGCTACGAGTGCCAGCCACTGTATCCAGAGGACTGGCAGCAGTTTTGGAAGATGCTGCGAAACTTGAACGAGAACACCGTGGGCCTTTTCGTGGGTCTCCCTATCATGATTTTCTGCTATGTGAAAATCCTTTTTGTGCTGTCCAGGTCCAGGAACTCCAAAAAGAACAGAGCTGTAAAGCTGATATTCatcatagtgtgtgtgtttgtggtgtgctGGGTCCCCTACAACGTCACAGTTTTCCTTCAGACACTGCAGCCGTTCGTGGACACCCTAAACAACTGCAAGGCTTCAAAATATATCGACTCTGCCATAGGCTTTGCTGAGATCATTGCACTGACTCACTGCTGTGTAAATCCACTCATCTATGCACTCGCAGGGGAAAAGTTTAGGAAGAAACTGGGCTATGTGCTGACTAGGTACTTCTGCCAGAGCAGAGGGACTTTCAGCCACAGAGACACCACAGACACTTCCAACACACCCGTAAAATCAGATTATTAAGAATGATAAACACAACTTGCTACAAAGAtggcaaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgctaaaaGCTGTAAAATGGTACTATGGATTGGTTTGAACAAAGGAATGTTTAGTCTATAGAATCTTATGAACACATTACTTAAAATCATGTAATTCAAAGTATATTCAAAACGTGtgaaaatatattgtttttgtaaaataaagaaagtaaacttga
>XM_039804911.1
CATATTAACATACATTTCTCGGAAAACCACAATGACACCTCTGTGCAGTTTTAACACGATGCGGAGGAAACAACAAAACCAAGAGTTCTCCTTACCAGAAACGAGCTCTGCAGCAGGATTTGACACAAAAAGCGAGCAATGCACGTTGACAGGATGCTTTGTAAGCTTGATGCACAGCAAAAGAGCACACAAATTCAAGAGCAGTGATTTGGGGAGACATTACGTATGAACATATCCGAGAACGAGACATTAATGTACTTGGACATGTATGATTATCATGACACCTGCGATCAGGATCTCGTTCCAGGATTGCCCAATGGATCCACGTTCTTGTCCGTTCTTTACTACATACTGTTTTGTCTAAGTCTGCTAGGCAACGCCACCGTTCTCTGGGTTCTCCTCCGGTATATAAAGCTGAAGACTATGGCGGACATATGCCTCCTCAACCTGGCCCTGTCGGACCTCATACTGGCTGTATCACTGCCCCTCTGGGCCTACAATTCCCAGAACCTTGCATCATGCAAACTGATGACAGGAGTCTATCAGTTGGGTTTCTACAGTGGTACGCTGTTTGTGACCCTAATGAGTGTGGACCGCTACCTGGCCATCGTCCACGCTGTTGCAGCCATGCGTGCCCGGACACTTTGCTATGGAATCATAGCCAGCATCACTATCTGGGCTATATCGGTCGTCATGGCAATCCCTGGGGTGATCTTTGCCTCCTTGGAGCTAGTAGATGCAGATAGCAACAGCTACGAGTGCCAGCCACTGTATCCAGAGGACTGGCAGCAGTTTTGGAAGATGCTGCGAAACTTGAACGAGAACACCGTGGGCCTTTTCGTGGGTCTCCCTATCATGATTTTCTGCTATGTGAAAATCCTTTTTGTGCTGTCCAGGTCCAGGAACTCCAAAAAGAACAGAGCTGTAAAGCTGATATTCatcatagtgtgtgtgtttgtggtgtgctGGGTCCCCTACAACGTCACAGTTTTCCTTCAGACACTGCAGCCGTTCGTGGACACCCTAAACAACTGCAAGGCTTCAAAATATATCGACTCTGCCATAGGCTTTGCTGAGATCATTGCACTGACTCACTGCTGTGTAAATCCACTCATCTATGCACTCGCAGGGGAAAAGTTTAGGAAGAAACTGGGCTATGTGCTGACTAGGTACTTCTGCCAGAGCAGAGGGACTTTCAGCCACAGAGACACCACAGACACTTCCAACACACCCGTAAAATCAGATTATTAAGAATGATAAACACAACTTGCTACAAAGAtggcaaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgctaaaaGCTGTAAAATGGTACTATGGATTGGTTTGAACAAAGGAATGTTTAGTCTATAGAATCTTATGAACACATTACTTAAAATCATGTAATTCAAAGTATATTCAAAACGTGtgaaaatatattgtttttgtaaaataaagaaagtaaacttga

Function

NR:

description
PREDICTED: C-C chemokine receptor type 4-like isoform X1

GO: NA

KEGG:

id description
K04179 CCR4, CD194; C-C chemokine receptor type 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804907.1 False 1483 mRNA 0.43 3 14592115 14593984
XM_039804909.1 False 1514 mRNA 0.45 4 14590243 14593984
XM_039804910.1 True 2323 mRNA 0.42 4 14590243 14593984
XM_039804911.1 False 1511 mRNA 0.45 4 14590243 14593984

Neighbor

gene id symbol gene type direction distance location
LOC120561614 NA coding upstream 1791 14584035 ~ 14588452 (+)
zgc:110410 LOC104941306 coding upstream 521295 14058640 ~ 14068948 (+)
LOC120562882 LOC104926221,LOC103388613,LOC103353832 coding upstream 968899 13609618 ~ 13621344 (+)
LOC120561886 LOC103353818,LOC102295432,LOC102785128,LOC101482972 coding upstream 1171791 13414324 ~ 13418452 (+)
rspo3 rspo3,LOC103353817 coding upstream 1178322 13395438 ~ 13411921 (+)
LOC120561707 NA coding downstream 6905 14600889 ~ 14603683 (+)
LOC120561930 NA coding downstream 9968 14603952 ~ 14607904 (+)
LOC120561617 NA coding downstream 17928 14611912 ~ 14619881 (+)
LOC120562066 NA coding downstream 109439 14703423 ~ 14704824 (+)
dnah5 dnah5 coding downstream 168386 14762370 ~ 14874113 (+)
G72520 NA non-coding upstream 72346 14514667 ~ 14517897 (+)
G72466 NA non-coding upstream 426499 14163536 ~ 14163744 (+)
LOC120561831 NA non-coding upstream 502447 14086603 ~ 14087796 (+)
G72319 NA non-coding upstream 1057241 13532125 ~ 13533002 (+)
G72314 NA non-coding upstream 1107132 13475370 ~ 13483111 (+)
G72551 NA non-coding downstream 10000 14603984 ~ 14604638 (+)
G72559 NA non-coding downstream 39096 14633080 ~ 14633375 (+)
G72560 NA non-coding downstream 40193 14634177 ~ 14635023 (+)
G72561 LOC103365327 non-coding downstream 43886 14637870 ~ 14640768 (+)
LOC120562067 NA non-coding downstream 50392 14644376 ~ 14645788 (+)
G72506 NA other upstream 164063 14425794 ~ 14426180 (+)
LOC120562174 rbms3,LOC101066789,LOC103370884 other upstream 220152 14175817 ~ 14370091 (+)
cmc1 cmc1 other upstream 445947 14133584 ~ 14144296 (+)
LOC120561928 csmd3,LOC101478087,LOC108232275,LOC102799137,LOC102309299,LOC102195523 other upstream 544107 13754053 ~ 14046136 (+)
LOC120562711 eif3h other upstream 901729 13624448 ~ 13688514 (+)
LOC120561718 LOC107101581 other downstream 32494 14626478 ~ 14632721 (+)
irx4a LOC103360443,LOC102233360,LOC103478376,LOC108232226,LOC101474805,LOC102784018,LOC102295185,LOC102202030,LOC104961814,LOC103145173 other downstream 959480 15553464 ~ 15560292 (+)
G72750 LOC104952694,LOC106925895 other downstream 1424375 16018359 ~ 16072201 (+)
G73031 LOC103366415 other downstream 2855601 17449585 ~ 17452568 (+)
ubxn11 NA other downstream 2862659 17456643 ~ 17461118 (+)

Expression


Co-expression Network