LOC120561725 (fam26e,LOC103478772,LOC106963711)


Basic Information

Item Value
gene id LOC120561725
gene name fam26e,LOC103478772,LOC106963711
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 8104864 ~ 8109365 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804941.1
gatggcactagatgaaaagggtcagattattattctaagtgtctgacactGCAGAGCCGATGATCTGGACCAGAGAGTTGGCTGTAGCACAACCAGCTCTCAACTTCAGCCTGTCTGTATCCAAAGGTAACGTCTGTAAAAGCTGCGCCAAGTGCAGCTCGACATTTAGTTGGCACAATTCGGAAATTTGCAAGTgaaaatctttttaaacaaaacgAAGCTAACCTGTCTGTACTCCAAAACAAAAACTCTCTGGATCTGCTGTCTCCACACTCCTGTTCACGTTCCATGCTATAACCTCCATGGATCCACACCGCTGTCTTCTGGCAAGTCACCTCGCGAGATTTCAGAATGAGACTTTTCCATCTTccgataatgttgtcagacacttagaacaataatctgagcctgtcagcggcaaaaacagaacttttagtggacgctgactgacgctgaacatttgtcctgtagggttagATTGCAGCTCGGTTcacggctgccggttacagcgttctcgctcaacGCTGGACCAATTTCCAACatagtcacttacacacaagtgtgtgggaaaatagggttgaaaataggttgaaaaatactgaaattctCATTTAAATAGAGATACAAAGGATGACACAACTGAAAGCAGAACAGTGTGAAATCACGATTCACGTGAGCCTTGATGCCCCCAAATGACTGGGCTGAAACAGGAAATGGACCACTTCCTGTGCACTGCTGGTAGACTGCATACAAACAGTATACATGTACACATTCAGAACGTGAGCTTCAGTGATGAAATGAATGTATTCATATGTGACGGCCTGTGCAGTCATTGTAAAACTCAAAGTGATGGCTTTAATGATGGCGTGGCTGTAACagcagcataataataataataataataatgatgtgcTTCATATGTTCACTGCTTCCTGTATAATGCACTGTGAGTGATTCAGTCTGAGTACTTCACTCTTGTGGTAATGGAACAGAGAAACCACCAAGAGGATGTGCTCACTTCCTCActctgctgctgatgctgactgcctctctctgtctctgcaacaACTGGCACTGTATGTTCTCTACCGAGACATTTCAACAGAAGGAATGAATGCTGTCCTTCTGTACGATTTTCCCCCTTTGCACGTTTTTTAAATTCCAGAACAAAAATTGCTGATTTCATCCTTGTTGAATGATAATGAGACGTGTTTGTTGTGTCtggtgagcgtgtgtgtgcatgaagaGAAACAAATCCAGTTGTCAAACTTCTCATTGCATATAAATGGATGACTGCTTCATATAAAAGTGATTAGAAACAGATGCATGACGCCGTTTCCGTTtctttggtgtgtgttttttttttccagcatgaAAGGGTTTCATGTTGCATTCCTTGCAAGGACACAGACTCACAGTCATTAAAAAACTAGACCAGCAGGTTTTTTTGTAATTGGACAGGAAGCATGTAAAGAGGGATGTACATGAAAACAGAGAAAGGGAAGTAAAGTGCAGCTGTGCCTATCTCTTTAGTGGCAGCGCAGTGGGGACTTCCCTTTGCAGGAGATCAAGAGGCTGTGGGCGGGCCGGAAGGAGCGCCGGACCGACTGAAGGAGGAGTCTGAAGAGAACCAGTGCCAGCCGAAGGGAGTGGCTCAAACAGGCTTGGcagatttgttttgtcttcAGCTGTGAAAGAACACAGGAGAACAGGGATTGACTGCAAACACTCaacatttttctcttttcacTCTCTGTCTTTCACTTGGGTTCATTTCTCGTGGAGTGTGTCTGAAACCTCCCCGCTGACGCCATGGATAACTTCCAGACTGTCCTGCGTTTCTTCATGAACCAGAAATCCACCATTGGCTACAGCTTCATGGCTCTCATGACTGTAGGTGGGGAGCGAATCTTCTCCGTGGTTTCCTTTCAGTGCCCGTGCAACCACGACCAGAACTTTGCCTACGGGCTGACCTTCCTGCTGGGCCCGGCTGCAGTGCTGCTGGTTTTGGGTCTCTTGTTCACCGGCAGGCTGTGGAGGCTCTACACTGGTTGCTGCCTCAACCCCATGAAGCTGTGCCCCCGTGGGAACTGCTTGGGCCACCTCCGGGTGTTGATGAGCATTTTCTGTGGCGCTTGCGTGGCTCCTGTAATGTGGCTCGCCGTGGCCCTGCTCAATGGGACCTTCTATGAGTGTGCGGTCAGTGGTCTGGATGATAACCTGGTGGTGGACCTGTTCTGTAAAAACAAGACGTTGGCGTGTCGGGAGGAGCTGGCCCGAGTGCCCTGTGATCGCTCCAAACTGTCCAGCGATGAGCGCATGGAGCTGCTGCTCATGTTCAGGGCCCAGTCCCAGATCCTGGGCTGGTGTGTGATCATCACCGCTGTCGTCGGGGGCCTCGTGGGTACCTGCTACAAAAACTGCCGCTCCAAAGTCAGCTTCCTGCAGCTCACCTTCTGGAAACGCTACATGGAACAAGAGAAGGAGCGCTTTGATACTCTCGCTGTGGAATACGCCAGCAAACTGGCCGACAGAAACCTGCAGAGCTTCTTTGAGAACAAGGAGCCTGCTCCGTTCCCTTTCCCCAACCACAGGGCATGGGAGGAGATCTCTGCATACTACACCTTCACCCAGAGCGAGCAGTGCTACAGCACCCTGCAGCGCTATGTGGAGAGGACAGACAGGGACTTCCCAGAGAACAAACCTGTGTTGGACGTAGAGCATGGTGGAAGAGATATGCTCTGAGAAACAACTGACTGTGGTGAGACTGttattaaaggacaaatctggcgcaaaatgaacctaggggttaataacacatgtgtaccgagttcgaccgttctctg

Function

NR:

description
protein FAM26E

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804941.1 True 2846 mRNA 0.48 2 8104864 8109365

Neighbor

gene id symbol gene type direction distance location
LOC120561897 NA coding upstream 15 8104249 ~ 8104849 (+)
LOC120561724 fam26e,LOC103478772 coding upstream 472 8096361 ~ 8104392 (+)
LOC120561722 NA coding upstream 8572 8091652 ~ 8096292 (+)
LOC120561723 NA coding upstream 15205 8083900 ~ 8089659 (+)
tcaim tcaim coding upstream 45448 8048460 ~ 8059416 (+)
rwdd1 rwdd1 coding downstream 5156 8114521 ~ 8121326 (+)
zgc:114181 LOC104932954,LOC102799802,LOC101469313 coding downstream 77922 8187287 ~ 8198861 (+)
pomgnt2 pomgnt2 coding downstream 254991 8364356 ~ 8384620 (+)
LOC120562241 NA coding downstream 345399 8454764 ~ 8504452 (+)
LOC120562991 LOC103388880 coding downstream 978819 9088184 ~ 9101502 (+)
G71220 NA non-coding upstream 35740 8068055 ~ 8069124 (+)
G71201 NA non-coding upstream 44063 8060110 ~ 8060801 (+)
G71211 NA non-coding upstream 45059 8049035 ~ 8059805 (+)
G71200 NA non-coding upstream 57195 8046950 ~ 8047669 (+)
G71204 osbpl10 non-coding upstream 123958 7972862 ~ 7980906 (+)
G71306 NA non-coding downstream 18334 8127699 ~ 8152466 (+)
G71305 NA non-coding downstream 22884 8132249 ~ 8132787 (+)
G71323 NA non-coding downstream 89588 8198953 ~ 8199908 (+)
G71325 NA non-coding downstream 107312 8216677 ~ 8236718 (+)
G71326 NA non-coding downstream 118470 8227835 ~ 8310764 (+)
G71147 LOC103388722,LOC104941093,LOC103369890 other upstream 303484 7731022 ~ 7801380 (+)
znrf2b znrf2 other upstream 604682 7456767 ~ 7500182 (+)
cdk14 cdk14 other upstream 812429 7039163 ~ 7292435 (+)
G70894 NA other upstream 2144010 5960455 ~ 5960854 (+)
si:ch211-198c19.1 NA other upstream 2509964 5591199 ~ 5594900 (+)
G71309 NA other downstream 12236 8121601 ~ 8122239 (+)
ano10a ano10 other downstream 174015 8283380 ~ 8309744 (+)
G71470 rrp15,LOC106584165,LOC106605018 other downstream 639578 8748943 ~ 8751443 (+)
LOC120561899 LOC104959271 other downstream 650681 8760046 ~ 8776508 (+)
trnay-gua_1 NA other downstream 700986 8810351 ~ 8810439 (+)

Expression


Co-expression Network