LOC120561738


Basic Information

Item Value
gene id LOC120561738
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 34585627 ~ 34600039 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804966.1
AAAAAGTATAGCTACTCCTCCTTCTTTCTTATCAAGTCTGTGGGCATCGATGGAGTTAAAATTTGGGGGTGCTGATTCAGTAAGGATGGCCACTCCGGTGATGTGATTACTTTTTAGGGGCAAGGACTTTCTCAGGCAGCTATGGCAGCACGTTGAATGGCAAAGTCAAGAACACTATACACaatgtttatttacattcatGACTGGGTGATCATATTCAGCCAGTCATGAATGCAAATTACTTTTTCAACCAAAAGCAGAAGTTGTTCTTTTCAGACTGACAGACTTATCCTAACAGAGGAACCAACCAGTTGTCCAATGAATATGCGCGGTGGATTAATTTCAGCAGTACTTCTCTGTCTGAAAGTCAGACAGAACCCAACAGAGCGACTGTAACCATGGCGGAGGGGGAGGTTAACTACGCTTCGGTTGTattcaaacgtaacagtcatcCTCCACCCCAAGCTagaaaggaggaggaaactGTGTACGATGAAGTGAAGGGGCAGAATAAAACAACTGAAGAAACTGCTGTCACAAACGCAGGATCCTTGCTagaaaagaaagcaaacaaCAGACGTCTCCAGTATCAGCGGCTGGCCTGTTGTTTGGGGATCCTTTGTGTCATTCTGCTGTTGGGTATCATAGCAGTCATCGTCGTCTACCAACTTGCTACACTAAGTCATCAGAGTGATGAAAGTGGGCTGATGGCTGCCAATCACAACCTGACAAACCTGAACAAGAAACTCAGCTTAGATAATGAAAAGTTGAGGAGGGACAACAACAATCTGACAGTCCAGTTGGGCAACCTGACACAAAACTATACTGTCTTAGAAAGCAAGATCACAAACCTGACTGTAGACGTCCAGAACCTGACAACACGAAACCTGCAGCTGAACTCACAAAACCAGCAGCTGGAGACACAGAGGAACAACTTAACAAAACGAATACAAGACTTGGAGAAAAACTTGAATGAGCTCAACGTCAGTCGAGCTCAGTGGAGCATTGATGCCTACtgccccaaaaaaacaaacgGGAGACAGTGTAAACCTTGTCAGAAGGACTGGGAACACACCGGGTCTAACTGCTATGCGTATAATAACGCTGATCCTCCTCATCGGAAAACCTGGGAAGAAGCTCGACAAGACTGCAGAGGAAAGGGTTCAGATCTGGTTGTTGTACATAATGAAGAGGAAAAGAATGCACTGAATACATACAGCGTGGGTAGTTCAGGAACTGATGGATACTGGTTTGGCCTGAGAGCTGAAGGTGGGAGATGGAAGTGGATTGATGGAAGTGATCTGACAAGCTACTGGACACCACAAcatcctcctcctgctgctgacgGTCAGTGTGTAATGTCTGTCCAGAACAATAAATGGATATCAGTGAGCTGTACTGAGAAAAAACAATGGATCTGCATAATGAAGGCTTTATCTGTTTAAACACTGCAGTCATACTCTGCATGGTAATATCAAGTGgcttataaatataaaactatgAAGACTTCTACTTCacaatttaaatattttgtattcAGAACTAAAAATGTTCAGGGGATTTATTTTTatagaaaaagaagagaaaataaatatttacagtGAATTATTTTGTAAAGCTGTTTGTGTATCTCGTTTAAAAAAGCAGACACTTAGATTTGAATGCATTTAGATATTTGATTATATAGGTATGCTAATGTAAGTCTGTGAAACATACAGTGACTAGACTGAAGGGGCACTGTTatcattgactacgtttacaagctgtcaatttttcgggttatggtcgggttaaggtcactattcgggtttctgaaacattcggaataacccgtttacatgcg
>XM_039804967.1
AAAAGTATAGCTACTCCTCCTTCTTTCTTATCAAGTCTGTGGGCATCGATGGAGTTAAAATTTGGGGGTGCTGATTCAGTAAGGATGGCCACTCCGGTGATGTGATTACTTTTTAGGGGCAAGGACTTTCTCAGGCAGCTATGGCAGCACGTTGAATGGCAAAGTCAAGAACACTATACACaatgtttatttacattcatGACTGGGTGATCATATTCAGCCAGTCATGAATGCAAATTACTTTTTCAACCAAAAGCAGAAGTTGTTCTTTTCAGACTGACAGACTTATCCTAACAGAGGAACCAACCAGTTGTCCAATGAATATGCGCGGTGGATTAATTTCAGCAGTACTTCTCTGTCTGAAAGTCAGACAGAACCCAACAGAGCGACTGTAACCATGGCGGAGGGGGAGGTTAACTACGCTTCGGTTGTattcaaacgtaacagtcatcCTCCACCCCAAGCTagaaaggaggaggaaactGTGTACGATGAAGTGAAGGGGCAGAATAAAACAACTGAAGAAACTGCTGTCACAAACGGATCCTTGCTagaaaagaaagcaaacaaCAGACGTCTCCAGTATCAGCGGCTGGCCTGTTGTTTGGGGATCCTTTGTGTCATTCTGCTGTTGGGTATCATAGCAGTCATCGTCGTCTACCAACTTGCTACACTAAGTCATCAGAGTGATGAAAGTGGGCTGATGGCTGCCAATCACAACCTGACAAACCTGAACAAGAAACTCAGCTTAGATAATGAAAAGTTGAGGAGGGACAACAACAATCTGACAGTCCAGTTGGGCAACCTGACACAAAACTATACTGTCTTAGAAAGCAAGATCACAAACCTGACTGTAGACGTCCAGAACCTGACAACACGAAACCTGCAGCTGAACTCACAAAACCAGCAGCTGGAGACACAGAGGAACAACTTAACAAAACGAATACAAGACTTGGAGAAAAACTTGAATGAGCTCAACGTCAGTCGAGCTCAGTGGAGCATTGATGCCTACtgccccaaaaaaacaaacgGGAGACAGTGTAAACCTTGTCAGAAGGACTGGGAACACACCGGGTCTAACTGCTATGCGTATAATAACGCTGATCCTCCTCATCGGAAAACCTGGGAAGAAGCTCGACAAGACTGCAGAGGAAAGGGTTCAGATCTGGTTGTTGTACATAATGAAGAGGAAAAGAATGCACTGAATACATACAGCGTGGGTAGTTCAGGAACTGATGGATACTGGTTTGGCCTGAGAGCTGAAGGTGGGAGATGGAAGTGGATTGATGGAAGTGATCTGACAAGCTACTGGACACCACAAcatcctcctcctgctgctgacgGTCAGTGTGTAATGTCTGTCCAGAACAATAAATGGATATCAGTGAGCTGTACTGAGAAAAAACAATGGATCTGCATAATGAAGGCTTTATCTGTTTAAACACTGCAGTCATACTCTGCATGGTAATATCAAGTGgcttataaatataaaactatgAAGACTTCTACTTCacaatttaaatattttgtattcAGAACTAAAAATGTTCAGGGGATTTATTTTTatagaaaaagaagagaaaataaatatttacagtGAATTATTTTGTAAAGCTGTTTGTGTATCTCGTTTAAAAAAGCAGACACTTAGATTTGAATGCATTTAGATATTTGATTATATAGGTATGCTAATGTAAGTCTGTGAAACATACAGTGACTAGACTGAAGGGGCACTGTTatcattgactacgtttacaagctgtcaatttttcgggttatggtcgggttaaggtcactattcgggtttctgaaacattcggaataacccgtttacatgcg
>XM_039804969.1
CTGAAAAAAGTATAGCTACTCCTCCTTCTTTCTTATCAAGTCTGTGGGCATCGATGGAGTTAAAATTTGGGGGTGCTGATTCAGTAAGGATGGCCACTCCGGTGATGTGATTACTTTTTAGGGGCAAGGACTTTCTCAGGCAGCTATGGCAGCACGTTGAATGGCAAAGTCAAGAACACTATACACaatgtttatttacattcatGACTGGGTGATCATATTCAGCCAGTCATGAATGCAAATTACTTTTTCAACCAAAAGCAGAAGTTGTTCTTTTCAGACTGACAGACTTATCCTAACAGAGGAACCAACCAGTTGTCCAATGAATATGCGCGGTGGATTAATTTCAGCAGTACTTCTCTGTCTGAAAGTCAGACAGAACCCAACAGAGCGACTGTAACCATGGCGGAGGGGGAGGTTAACTACGCTTCGGTTGTattcaaacgtaacagtcatcCTCCACCCCAAGCTagaaaggaggaggaaactGTGTACGATGAAGTGAAGGGGCAGAATAAAACAACTGAAGAAACTGCTGTCACAAACGCAGGATCCTTGCTagaaaagaaagcaaacaaCAGACGTCTCCAGTATCAGCGGCTGGCCTGTTGTTTGGGGATCCTTTGTGTCATTCTGCTGTTGGGTATCATAGCAGTCATCGTCGTCTACCAACAAAGCAAGATCACAAACCTGACTGTAGACGTCCAGAACCTGACAACACGAAACCTGCAGCTGAACTCACAAAACCAGCAGCTGGAGACACAGAGGAACAACTTAACAAAACGAATACAAGACTTGGAGAAAAACTTGAATGAGCTCAACGTCAGTCGAGCTCAGTGGAGCATTGATGCCTACtgccccaaaaaaacaaacgGGAGACAGTGTAAACCTTGTCAGAAGGACTGGGAACACACCGGGTCTAACTGCTATGCGTATAATAACGCTGATCCTCCTCATCGGAAAACCTGGGAAGAAGCTCGACAAGACTGCAGAGGAAAGGGTTCAGATCTGGTTGTTGTACATAATGAAGAGGAAAAGAATGCACTGAATACATACAGCGTGGGTAGTTCAGGAACTGATGGATACTGGTTTGGCCTGAGAGCTGAAGGTGGGAGATGGAAGTGGATTGATGGAAGTGATCTGACAAGCTACTGGACACCACAAcatcctcctcctgctgctgacgGTCAGTGTGTAATGTCTGTCCAGAACAATAAATGGATATCAGTGAGCTGTACTGAGAAAAAACAATGGATCTGCATAATGAAGGCTTTATCTGTTTAAACACTGCAGTCATACTCTGCATGGTAATATCAAGTGgcttataaatataaaactatgAAGACTTCTACTTCacaatttaaatattttgtattcAGAACTAAAAATGTTCAGGGGATTTATTTTTatagaaaaagaagagaaaataaatatttacagtGAATTATTTTGTAAAGCTGTTTGTGTATCTCGTTTAAAAAAGCAGACACTTAGATTTGAATGCATTTAGATATTTGATTATATAGGTATGCTAATGTAAGTCTGTGAAACATACAGTGACTAGACTGAAGGGGCACTGTTatcattgactacgtttacaagctgtcaatttttcgggttatggtcgggttaaggtcactattcgggtttctgaaacattcggaataacccgtttacatgcg
>XM_039804970.1
TGAAAAAAGTATAGCTACTCCTCCTTCTTTCTTATCAAGTCTGTGGGCATCGATGGAGTTAAAATTTGGGGGTGCTGATTCAGTAAGGATGGCCACTCCGGTGATGTGATTACTTTTTAGGGGCAAGGACTTTCTCAGGCAGCTATGGCAGCACGTTGAATGGCAAAGTCAAGAACACTATACACaatgtttatttacattcatGACTGGGTGATCATATTCAGCCAGTCATGAATGCAAATTACTTTTTCAACCAAAAGCAGAAGTTGTTCTTTTCAGACTGACAGACTTATCCTAACAGAGGAACCAACCAGTTGTCCAATGAATATGCGCGGTGGATTAATTTCAGCAGTACTTCTCTGTCTGAAAGTCAGACAGAACCCAACAGAGCGACTGTAACCATGGCGGAGGGGGAGGTTAACTACGCTTCGGTTGTattcaaacgtaacagtcatcCTCCACCCCAAGCTagaaaggaggaggaaactGTGTACGATGAAGTGAAGGGGCAGAATAAAACAACTGAAGAAACTGCTGTCACAAACGGATCCTTGCTagaaaagaaagcaaacaaCAGACGTCTCCAGTATCAGCGGCTGGCCTGTTGTTTGGGGATCCTTTGTGTCATTCTGCTGTTGGGTATCATAGCAGTCATCGTCGTCTACCAACAAAGCAAGATCACAAACCTGACTGTAGACGTCCAGAACCTGACAACACGAAACCTGCAGCTGAACTCACAAAACCAGCAGCTGGAGACACAGAGGAACAACTTAACAAAACGAATACAAGACTTGGAGAAAAACTTGAATGAGCTCAACGTCAGTCGAGCTCAGTGGAGCATTGATGCCTACtgccccaaaaaaacaaacgGGAGACAGTGTAAACCTTGTCAGAAGGACTGGGAACACACCGGGTCTAACTGCTATGCGTATAATAACGCTGATCCTCCTCATCGGAAAACCTGGGAAGAAGCTCGACAAGACTGCAGAGGAAAGGGTTCAGATCTGGTTGTTGTACATAATGAAGAGGAAAAGAATGCACTGAATACATACAGCGTGGGTAGTTCAGGAACTGATGGATACTGGTTTGGCCTGAGAGCTGAAGGTGGGAGATGGAAGTGGATTGATGGAAGTGATCTGACAAGCTACTGGACACCACAAcatcctcctcctgctgctgacgGTCAGTGTGTAATGTCTGTCCAGAACAATAAATGGATATCAGTGAGCTGTACTGAGAAAAAACAATGGATCTGCATAATGAAGGCTTTATCTGTTTAAACACTGCAGTCATACTCTGCATGGTAATATCAAGTGgcttataaatataaaactatgAAGACTTCTACTTCacaatttaaatattttgtattcAGAACTAAAAATGTTCAGGGGATTTATTTTTatagaaaaagaagagaaaataaatatttacagtGAATTATTTTGTAAAGCTGTTTGTGTATCTCGTTTAAAAAAGCAGACACTTAGATTTGAATGCATTTAGATATTTGATTATATAGGTATGCTAATGTAAGTCTGTGAAACATACAGTGACTAGACTGAAGGGGCACTGTTatcattgactacgtttacaagctgtcaatttttcgggttatggtcgggttaaggtcactattcgggtttctgaaacattcggaataacccgtttacatgcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804966.1 True 1843 mRNA 0.42 7 34585627 34600035
XM_039804967.1 False 1839 mRNA 0.42 7 34585627 34600034
XM_039804969.1 False 1682 mRNA 0.42 7 34585627 34600039
XM_039804970.1 False 1678 mRNA 0.42 7 34585627 34600038

Neighbor

gene id symbol gene type direction distance location
LOC120561740 NA coding downstream 55574 34517477 ~ 34530053 (-)
LOC120561750 NA coding downstream 99865 34482786 ~ 34485762 (-)
LOC120561755 NA coding downstream 198698 34386412 ~ 34386929 (-)
LOC120561739 NA coding downstream 205334 34369691 ~ 34380293 (-)
LOC120561754 NA coding downstream 216485 34364447 ~ 34369142 (-)
mef2d mef2d,LOC103369254,LOC103388711 coding upstream 34702 34634741 ~ 34778605 (-)
LOC120562852 NA coding upstream 207791 34807830 ~ 34809849 (-)
rhbg rhbg2a,LOC106605319 coding upstream 314282 34914321 ~ 34932785 (-)
isg20l2 isg20l2 coding upstream 433844 35033883 ~ 35043980 (-)
LOC120563201 NA coding upstream 472919 35072958 ~ 35088429 (-)
LOC120561760 NA non-coding downstream 26080 34558496 ~ 34559547 (-)
LOC120561769 NA non-coding downstream 90868 34493956 ~ 34494759 (-)
LOC120561767 NA non-coding downstream 111852 34456746 ~ 34473775 (-)
G78318 NA non-coding downstream 116109 34468899 ~ 34469518 (-)
LOC120561765 NA non-coding downstream 121164 34462062 ~ 34464463 (-)
G78389 NA non-coding upstream 244250 34844289 ~ 34850430 (-)
LOC120562743 NA non-coding upstream 269348 34869387 ~ 34888246 (-)
G78406 NA non-coding upstream 310319 34910358 ~ 34910573 (-)
G78446 NA non-coding upstream 427339 35027378 ~ 35027581 (-)
G78448 NA non-coding upstream 430603 35030642 ~ 35030846 (-)
G78321 NA other downstream 92432 34492346 ~ 34493195 (-)
LOC120561748 NA other downstream 244646 34339177 ~ 34340981 (-)
LOC120561737 NA other downstream 262612 34316812 ~ 34323015 (-)
LOC120561747 NA other downstream 311975 34261526 ~ 34273652 (-)
LOC120561744 NA other downstream 453195 34129538 ~ 34132432 (-)
bcan NA other upstream 374785 34974824 ~ 35004333 (-)
G78444 NA other upstream 412064 35012103 ~ 35014522 (-)
G78496 NA other upstream 573827 35173866 ~ 35177239 (-)
plekhf2 plekhf2 other upstream 668318 35268357 ~ 35309397 (-)
G78733 LOC104935873 other upstream 1424692 36024731 ~ 36026542 (-)

Expression


Co-expression Network