Gene
RNA
| Item | Value |
|---|---|
| gene id | cops7a |
| gene name | cops7a |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053118.1 |
| NCBI id | CM020915.1 |
| chromosome length | 43092710 |
| location | 24194449 ~ 24205673 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| cops7a | Predicted to act upstream of or within COP9 signalosome assembly. Predicted to be located in cytoplasm. Predicted to be part of COP9 signalosome. Orthologous to several human genes including COPS7A (COP9 signalosome subunit 7A). |
| description |
|---|
| PREDICTED: COP9 signalosome complex subunit 7a |
| id | name | namespace |
|---|---|---|
| GO:0008180 | COP9 signalosome | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| id | description |
|---|---|
| K12180 | COPS7, CSN7; COP9 signalosome complex subunit 7 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039805101.1 | True | 1431 | mRNA | 0.52 | 8 | 24194449 | 24205673 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120561822 | NA | coding | upstream | 437 | 24185651 ~ 24194012 (+) |
| cd4-1 | NA | coding | upstream | 13897 | 24163145 ~ 24180552 (+) |
| cd4-2.2 | NA | coding | upstream | 32133 | 24151736 ~ 24162316 (+) |
| usp5 | usp5,LOC102781302 | coding | upstream | 43012 | 24135689 ~ 24151437 (+) |
| cdca3 | NA | coding | upstream | 76384 | 24115503 ~ 24118065 (+) |
| znf384b | LOC103367544 | coding | downstream | 19480 | 24225153 ~ 24233422 (+) |
| gnl1 | gnl1,LOC102778060 | coding | downstream | 28475 | 24234148 ~ 24243554 (+) |
| ddr1 | ddr1 | coding | downstream | 47530 | 24253203 ~ 24292486 (+) |
| tubb5 | tubb,tubb5,LOC102780606,LOC108432309 | coding | downstream | 97165 | 24302838 ~ 24307580 (+) |
| mdc1 | LOC104943792 | coding | downstream | 103376 | 24309049 ~ 24320416 (+) |
| G75583 | NA | non-coding | upstream | 69368 | 24122027 ~ 24125081 (+) |
| G75582 | gnb3,LOC103375278 | non-coding | upstream | 72440 | 24119317 ~ 24122009 (+) |
| G75523 | tpi1,tpi,LOC102304959 | non-coding | upstream | 141493 | 24048925 ~ 24052956 (+) |
| G75517 | NA | non-coding | upstream | 163110 | 24027883 ~ 24031339 (+) |
| G75493 | NA | non-coding | upstream | 218715 | 23972327 ~ 23975734 (+) |
| G75611 | NA | non-coding | downstream | 10467 | 24216140 ~ 24216569 (+) |
| G75622 | flot1,LOC108235422 | non-coding | downstream | 90165 | 24295838 ~ 24296723 (+) |
| LOC120562289 | NA | non-coding | downstream | 263161 | 24468834 ~ 24488842 (+) |
| G75798 | NA | non-coding | downstream | 594568 | 24800241 ~ 24804853 (+) |
| G75803 | NA | non-coding | downstream | 617353 | 24823026 ~ 24824765 (+) |
| lpcat3 | lpcat3 | other | upstream | 120751 | 24056437 ~ 24073698 (+) |
| atn1 | atn1 | other | upstream | 155022 | 24026915 ~ 24039427 (+) |
| LOC120563047 | vamp1,LOC104928996 | other | upstream | 315034 | 23873909 ~ 23879415 (+) |
| LOC120563204 | NA | other | upstream | 381041 | 23768233 ~ 23813408 (+) |
| casp2 | casp2,LOC102795506,LOC103369458 | other | upstream | 542953 | 23641555 ~ 23651496 (+) |
| G75644 | NA | other | downstream | 229466 | 24435139 ~ 24436819 (+) |
| dedd1 | dedd2 | other | downstream | 315062 | 24520735 ~ 24534276 (+) |
| grik5 | grik5 | other | downstream | 600616 | 24806289 ~ 24885373 (+) |
| LOC120561858 | NA | other | downstream | 709581 | 24915254 ~ 24996309 (+) |
| LOC120561674 | LOC104943405,LOC103477911,LOC108235491,LOC108235490,LOC102233864,LOC107379681 | other | downstream | 1168534 | 25374207 ~ 25380798 (+) |
