zgc:110410 (LOC104941306)


Basic Information

Item Value
gene id zgc:110410
gene name LOC104941306
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 14058640 ~ 14068948 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805112.1
atggcTGTCTAAACAGGGAAAACAGTTTCCTTTTGTTTTAGCCTCATGTCATGTAGTTGAGAGAAATGAAGGATTTGATCCAGCAGTTAAAATGAAGAGGCAGCTATTTTAAAGGGAGCTCTCTGGAGGATTTGGTTGCTGCTGGTTGGGGAGGTGGCAGCAATAGAATGGGGAGAGTCACAATCAAATCATTGCAATTAGTAGAAGAAGCACAGGAGACTAGTGCCCCCCAGTGTTTGCTTGATATATGTTTAGTGTTTGTATGCTGCTGTGAAATAATCAGATTCAAAACTAtctgagtagattttttttttttatgatgtgcACTGATCCAGTAAATTTGGAATTTAGTTTTGACCGCATGAAAACCTCAACTTTAACTGCTGATACAATCATTTATAAATCATTTGTATGTGTCCTCTGCAGTTTCAGTCAGAGTTGCTGATAGTTAGAACATGAGGCACGAGGTCTATCGGCCTCTTTGGTTGATCATCCATAACATCAGAAGAGGCTGGAATGCCATCTAGAGGTTAGGTAGCTATAGTGTTATGTactgtggtggaagaagtagtagttttaactttatttacagtataggTACTGTAGTTTAGTCCAGTGTTTTCCAACCTCGGGGTCTGGCCCCTCCAAAGCCTCACAAGATAAATCTAAGGGGGTTGTGAGATGATTAATATGGGAGGAAATAAGTTCTgctacacaaatttgtatttatttgtcgCACTTGTCTCAAAtgttttctaagattttttttaccgTGATATTTTGGACAATTTTACCTCTTTGGACCTCAAACCCTTATTGAATTGAAACTATGTGAGAGGTTTGAGGGGAAATGTCTCTTTAGTGGAACTGCTAATAACCCATAGACATCTgaaacataataaagacactgttTTTTGTAAGAGGTTGTTGAAAGAAGTAAGAGGTTTGTGAATGCGTGgttcatattattttttttatgtgaactCTTAATTTGCAAAGTAACTAACTATAGATGTCAAACTATTGTAGTAGAGTAAAAACTACAGTCTTTCCCTATGAGATGTGAAGTAGAattataaagtagcataaagtAAAGTGAAGTACCTCAAAACTGGAGTAAGTGTagatagttactttccaccactggttatGTATCTGAGGCATAGTCACTTTAAAATATCATATTAATACACTGAATGTTTAGTTCAATCAAATCAGGGCTAAGACTCAACATTGAATCAATGCTAAGAAGTGGAAATTACAATTTTACTGAGCTATGTTTTGTTtcaaagaaaaatgaaatggaTCCATCCTGGACTAGTTTCTCATTCATGGATGAGGTCTTCATTATATGCCTTTCAGTGGCGATTCTCCATGGAGAAGCATTAAGACTGTATTGACCTACATTACTTCACGTATTTTTGGCGTACAGTATGTCTTAAAGCTATTCTTCCTCGCTGTGACTCAATATCCATAATCCCTTTTGCGTCTGTTGGATTGATGGCGTACATCATTTATTTGTCTCTCCGTCACTGAATGGTTTCCATGGGCAGGTTGTTATCAATGTGTAACCAAGGTGAGTCAGGGAGGTTACGTGACTCCCAGGATTCCACAGGCTGCCATTTGCCTTTCTGTACAATACAGGATGAGATGTTACAGGCTTCTCACACACAGCAGGCTAATGATAGATCATTACAGGAAATAGAAATTTGAAACATACCTTTGTTAAAGTGTGTGAAAGCACCAGTATCAACTTGTTCTTAAGGCTCATGTGGATCAATAttgctgaaagaaaaaaaaggtgaagaCACAATTTACTCTGACAAAGTGCCAGCCTGGTTGGTTTAATGACATTTTAAGAACTTCATCTGAATATCCCATTGGACCTAATGAGGGATACATCCTTTTCCCCTGGAGCTTAAGTCCTATCTCTGTGGGAACCGACTGATAGCAGGTAGACTTTGCCCTGAAGGGGAACCAACACTACAGGAAGGGCAAGCAGAGCAGTTTCCTGGCCGTCACAGCAGAGTTGATGAAAAGATCAAACTTTTGGTGGAATGGACAAGACTAATGGCAGCAGCAATGGTGGTTATGAACCTCATCCCCCTCCGTACAATACTCAGGACTACGGACAGAGTTCTTACACAGGGATGAGCTATCAGGTGGGGAAGGGGAACGTTGCAGTGGTCTCCCCTCCTGGCACCTATGATAACATGGTCCATCCTGAGGGCATGGCAGCAGCTGGAGGCGACCATGAGTATGGTCAAGCTCCACCTGACTACTGTCACGGTTTAGAGGACAGCAGCTTCAGCGACGCTGCCATACGAAGAGGCTTCATAAGGAAAGTCTACTTGACTTTGATGATTCAGCTGCTGGTGACGGTCGGGATCATCTGTTCTTTTCTTTACTGGGACACTCTCAGGAAATGGACATGGGCCAACTACTGGTTCTCCTACGCCATGATGGCGGCGGTGATGGTGCTCATCGTGGCCTTGTCCTGCTGTGGCAACCTCCGTCGTCAAGTCCCCCTCAATTTCATCGCCCTGGGCCTGTTTactaTTGCAGAGGGCCTGATGCTTGGATCTGTGGCAGCGTACTTTGATGCAGAAGCAGTTCTGTGGGCTGTGGGAGCAACAGCGCTGGTGTCCTTCGCCTTGACCCTGTTTGCTCTGCAGTCAAAGTGGGACTTCACCAGAGTAAATGGGAGCCTGTGGGTGTTTGCCTGGACCCTCTTTTCATTTGCATTGCTGTGTGCAATCCTCCGATCGCAGTATCTTTACATCTTGTACGCCTGCCTGGGAACCTTGCTGTTTTCTTTATACTTGGTGTTTGATACCCAGCTTATCCTGGGTGGGAAACACAGGAAGTATGAAGTCTCTCCTGAGGAGTATGTGTTTGCTGCTCTCAACCTCTATTTGGACATTGTCACCCtgttcctcctgctgctgcagctcatCGGCCTATGCCGCTAACTCTGAACCTCGCTGACAGGCCTCCCTAAAGAAACACTGAAACGCTCGTCAAGAACATTATGTATTTAGGTTCATATGGGATGAAGATTCACAACCCCCTGTTAGTACTCCAGACATCTGCTGTCATATTTAATTAGGCAGGGATCTGTACAGGTTTGTTTTAAAGTCACGTGTCAGGGTTTATGTTACTGCGATAGGCTGTGTGCTACATTTGGGACTTTTATACTGCACCAGCATGCATTTCTACCTAGAACTTCCAATTTAATGTGCTTAATATTTGTTTCTATGAATATGACAATTTATTATCAGTCTTCTGTAGGAAGAAACTGAAACTTTAAGGCAAATAGAAAGTGCCAAATCAATTCAGGTAGTAACTTATGATATAAGCCAAAGTAGTTCAGCCATCATGTAATCTGTGCCACATTTGCAAAAGTTTAAGCGAAGCTTAAATATGCCTTTGGATATCAAACTAAACTACATTAAAAGGACAGAATATGTCCGTGTTAGCCAAAATCTGATGTTCACTCAGaatgtatatagtatatatctcTATGaccaatttattaaaaaaaaaaacacacaaattaaaACTCAACACGTAGTTTATTGGCATCACACATCAAACATTTTTCATATAAAGAGGGAATGTATCAAGTATAGACTATGAAAGTGCAAATAGCATTTCAAGGATTAGTTGCTTTACAATAGAAAATCTCAGTGAGTTACAAAATGttatatgccattttaaaataaatcacttgATCATTAGAGGTGAAATACAAAGGAAGTACAAATTCCATTTAGACTTGTACCCATTTCATGCACAGCATACTGTCACACAAAAAGGGCGATCTCTTCTGTTAAATCCACTTCCATTAACCAAATCCAACAAAGTTAGCTGCACTAACCATATGGCACTTAGTTTCAGAACTTCAAGACTCTATGTTTAGATTTAATGTGGCTCTATACAGGGGGAAAAATAAAGTAATTTTCTTCAGTCAGACATTAGTCTGTACAAAAACACAATTAAGTCTTAAAGGTAAAACACTGCTGATCAATGTGTCATATTGGTTATTCACAATCCATTTTTGTCAATGAATTCAATTGATTTCAAATAAATACCTACTTTATATTGCAA

Function

NR:

description
protein lifeguard 1-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K24205 TMBIM, LFG; protein lifeguard

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805112.1 True 4110 mRNA 0.40 11 14058640 14068948

Neighbor

gene id symbol gene type direction distance location
LOC120562882 LOC104926221,LOC103388613,LOC103353832 coding upstream 437296 13609618 ~ 13621344 (+)
LOC120561886 LOC103353818,LOC102295432,LOC102785128,LOC101482972 coding upstream 640188 13414324 ~ 13418452 (+)
rspo3 rspo3,LOC103353817 coding upstream 646719 13395438 ~ 13411921 (+)
trmt11 trmt11 coding upstream 794548 13252697 ~ 13264092 (+)
LOC120561555 ncoa7,LOC104938018 coding upstream 815415 13239114 ~ 13243225 (+)
LOC120561614 NA coding downstream 515087 14584035 ~ 14588452 (+)
si:cabz01093077.1 NA coding downstream 521295 14590243 ~ 14593984 (+)
LOC120561707 NA coding downstream 531941 14600889 ~ 14603683 (+)
LOC120561930 NA coding downstream 535004 14603952 ~ 14607904 (+)
LOC120561617 NA coding downstream 542964 14611912 ~ 14619881 (+)
G72319 NA non-coding upstream 525638 13532125 ~ 13533002 (+)
G72314 NA non-coding upstream 575529 13475370 ~ 13483111 (+)
G72309 NA non-coding upstream 585170 13471751 ~ 13473470 (+)
LOC120562636 NA non-coding upstream 610401 13445866 ~ 13448239 (+)
G72242 NA non-coding upstream 849606 13208828 ~ 13209034 (+)
LOC120561831 NA non-coding downstream 17655 14086603 ~ 14087796 (+)
G72466 NA non-coding downstream 94588 14163536 ~ 14163744 (+)
G72520 NA non-coding downstream 445719 14514667 ~ 14517897 (+)
G72551 NA non-coding downstream 535036 14603984 ~ 14604638 (+)
G72559 NA non-coding downstream 564132 14633080 ~ 14633375 (+)
LOC120561928 csmd3,LOC101478087,LOC108232275,LOC102799137,LOC102309299,LOC102195523 other upstream 12504 13754053 ~ 14046136 (+)
LOC120562711 eif3h other upstream 370126 13624448 ~ 13688514 (+)
LOC120562530 ext1,LOC103135121 other upstream 452395 13559760 ~ 13606245 (+)
prelid3a prelid3a other upstream 587124 13468211 ~ 13471516 (+)
hint3 hint3 other upstream 808530 13245668 ~ 13250110 (+)
cmc1 cmc1 other downstream 64636 14133584 ~ 14144296 (+)
LOC120562174 rbms3,LOC101066789,LOC103370884 other downstream 106869 14175817 ~ 14370091 (+)
G72506 NA other downstream 356846 14425794 ~ 14426180 (+)
LOC120561718 LOC107101581 other downstream 557530 14626478 ~ 14632721 (+)
irx4a LOC103360443,LOC102233360,LOC103478376,LOC108232226,LOC101474805,LOC102784018,LOC102295185,LOC102202030,LOC104961814,LOC103145173 other downstream 1484516 15553464 ~ 15560292 (+)

Expression


Co-expression Network