hormad1


Basic Information

Item Value
gene id hormad1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 33032239 ~ 33049137 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805114.1
aacgttagctagctacctagctaaTAGGTGAACTTGCTAGTTGTAGTTTACAGTAGCTGGCTAATGCAACACTACTAAACTGCCTAAACTTTGTAGGCCACTTTGGTCGTCATCACATcatttcactcttttctttgCAGCTCTGATTTTGTGTTCTCTCACAACTGCAATGGCCTGTGCACAGCGAGTTAGAACTTCTCAGGATACTCAGCTGTTGCCGAATCAGGTTCTCTCCGAGCAGCAGTCGTTGGTTGTTATAAAGAAGCTTCTGGCCATCGCAGTGTCTGGCATCACATACCTCCGGGGCCTTTTCCCAGAGAAAGCCTACGGCAACAAATATATCGAAGATCAGAAGGTGATGATCCTTAAAGAGGAGCTCAGCTGTCCCGGTTCCAGTCAGATTGTTCAATGGATGCAGGGATGCTTTGAGGCCATCCAGAAGAAGTTTCTGCGGACAGTCATTATGTCTATCTACACTGACCCAGAGAACCCCCAGAAAGTGACTGAGTATTACCAGTTTAAGATCCATTACACAGCAAAAGGAGCACAGATGGACTTTGAAAGcaacaacaacaacaacaacaacgtgtCGTCGATGTCGTGCGGCAACACTAAGAAGGCCAGCATCCTGCTGGTGAGGAAGCTCTACACTCTGATGCAGAACCTCGGCCCTCTGCCAGACAACGTCTGCCTCAACATGAAGCTGGCCTACTATGACAACGTCACTCCTCAGAACTACCAGCCGCCAGGCTTTAGGGAGGCGGACGGCGACACCATGGAGTTTGAGAAGGAGCCGGTCAGACTGACCATGGGCGAGGTGGTCACTCCCTTCCACACTCTGAAGCTGGACATGGCCACCGAGAGACAGAGACTGGAGCAGGTGGAGGAGACTGTTCACGTGACAGAGAAGTGGGTGCtgaacatggaggaggagggcGTCCTGTCGCAGACTCATGTGATTGAAGACGTGGAGAAGCCTGACAACGACAGCACAGACTTGGACAACACTGAGATCCAGATGAGCTGTCTTGAGAAGATGGAGAGCTGTGAGGAAGTCACGGAGATGGACGCTCTGGCGAAGAAGACCTCTGAGATCATGGAGGCGGGCCTGAAGAGGACCAGGAGTGGACGGATCGTCAAGTCTCCTACGGAGACAAACCTGACTGTGAACAGCCAGAAGCCGACAGCTATGAAGGACAAAGCGatttctcAGTTTGACATCCCCAACAGCCAGGAAACGCCATCCTCCCAGCCTAAGAAGAAGCGCAAATTCAGCGAGCCCAAAGAACACTACTGACGTCACCCCCCCCTCTGCTAACACGGCAGCACGGCTGTATTGATTTacattgatgtttttttaaatttaaatttttgcTACATGTTACATAGCTGTTTTTTTGAAAGGGAATTCCACTCCTTATTGCTTTCATTTTGGGGTTGTTTGCTCTACAGTTTATAAAAATCCAACGCAAATCTATGGACATATCACATATTTGATGTTAGAATAGTGGTGAACAATGTATAAATTAACACAGTATTTCAGTAGTTTTTTAATGGCTAtgattgttttattgttatcaCTTTGTTTACAAAGCTGGATTTCATACttgaataaaatacataaaatgca
>XM_039805115.1
CAAGCCATGTGCAAGTCAGGACGAAGACATGGGAGTGTTTTCAATGCATGTGTTTTCACCGGTTCAAAGTGTACCGAGTGAACCCATCAATTTACGCCTCTTGTTGGAGACGGTCGGCCCTGCACGGCACGTTTTGAGACCCTCCAGGACAGACCAATGAGGCCCGAGCTGTCGTGGACTCGCCAGCCAATGACACAGGGCAAGGGACAAAACAAACTGACAGACTGGCAATGAGCTCTGTATGCTCTGATTTTGTGTTCTCTCACAACTGCAATGGCCTGTGCACAGCGAGTTAGAACTTCTCAGGATACTCAGCTGTTGCCGAATCAGGTTCTCTCCGAGCAGCAGTCGTTGGTTGTTATAAAGAAGCTTCTGGCCATCGCAGTGTCTGGCATCACATACCTCCGGGGCCTTTTCCCAGAGAAAGCCTACGGCAACAAATATATCGAAGATCAGAAGGTGATGATCCTTAAAGAGGAGCTCAGCTGTCCCGGTTCCAGTCAGATTGTTCAATGGATGCAGGGATGCTTTGAGGCCATCCAGAAGAAGTTTCTGCGGACAGTCATTATGTCTATCTACACTGACCCAGAGAACCCCCAGAAAGTGACTGAGTATTACCAGTTTAAGATCCATTACACAGCAAAAGGAGCACAGATGGACTTTGAAAGcaacaacaacaacaacaacaacgtgtCGTCGATGTCGTGCGGCAACACTAAGAAGGCCAGCATCCTGCTGGTGAGGAAGCTCTACACTCTGATGCAGAACCTCGGCCCTCTGCCAGACAACGTCTGCCTCAACATGAAGCTGGCCTACTATGACAACGTCACTCCTCAGAACTACCAGCCGCCAGGCTTTAGGGAGGCGGACGGCGACACCATGGAGTTTGAGAAGGAGCCGGTCAGACTGACCATGGGCGAGGTGGTCACTCCCTTCCACACTCTGAAGCTGGACATGGCCACCGAGAGACAGAGACTGGAGCAGGTGGAGGAGACTGTTCACGTGACAGAGAAGTGGGTGCtgaacatggaggaggagggcGTCCTGTCGCAGACTCATGTGATTGAAGACGTGGAGAAGCCTGACAACGACAGCACAGACTTGGACAACACTGAGATCCAGATGAGCTGTCTTGAGAAGATGGAGAGCTGTGAGGAAGTCACGGAGATGGACGCTCTGGCGAAGAAGACCTCTGAGATCATGGAGGCGGGCCTGAAGAGGACCAGGAGTGGACGGATCGTCAAGTCTCCTACGGAGACAAACCTGACTGTGAACAGCCAGAAGCCGACAGCTATGAAGGACAAAGCGatttctcAGTTTGACATCCCCAACAGCCAGGAAACGCCATCCTCCCAGCCTAAGAAGAAGCGCAAATTCAGCGAGCCCAAAGAACACTACTGACGTCACCCCCCCCTCTGCTAACACGGCAGCACGGCTGTATTGATTTacattgatgtttttttaaatttaaatttttgcTACATGTTACATAGCTGTTTTTTTGAAAGGGAATTCCACTCCTTATTGCTTTCATTTTGGGGTTGTTTGCTCTACAGTTTATAAAAATCCAACGCAAATCTATGGACATATCACATATTTGATGTTAGAATAGTGGTGAACAATGTATAAATTAACACAGTATTTCAGTAGTTTTTTAATGGCTAtgattgttttattgttatcaCTTTGTTTACAAAGCTGGATTTCATACttgaataaaatacataaaatgca

Function

NR:

description
HORMA domain-containing protein 1-like isoform X2

GO: NA

KEGG:

id description
K12778 HORMAD, HOP1; meiosis-specific protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805114.1 False 1630 mRNA 0.47 15 33033735 33049137
XM_039805115.1 True 1734 mRNA 0.48 16 33032239 33049137

Neighbor

gene id symbol gene type direction distance location
LOC120562446 NA coding upstream 81529 32947311 ~ 32950710 (+)
scnm1 LOC104949611 coding upstream 121047 32905361 ~ 32911192 (+)
tnfaip8l2b tnfaip8l2 coding upstream 131910 32892531 ~ 32900329 (+)
LOC120562193 LOC103388706 coding upstream 143889 32853357 ~ 32888350 (+)
LOC120562270 scap coding upstream 658052 32315022 ~ 32374187 (+)
onecutl LOC106524064,LOC104923936,LOC108243192 coding downstream 38053 33087190 ~ 33096138 (+)
lingo4b LOC104947071,LOC108243198 coding downstream 126772 33175909 ~ 33200642 (+)
si:ch211-113g11.6 LOC103362574,LOC103388694,LOC108243248 coding downstream 157570 33206707 ~ 33260917 (+)
tlr18 LOC103362575 coding downstream 214593 33263730 ~ 33278517 (+)
s100a1 s100a1,LOC105028680,LOC106605324,LOC107587912,LOC107689908,LOC107663298,LOC107598020,LOC108272706,LOC108441918 coding downstream 233910 33283047 ~ 33286346 (+)
G77890 NA non-coding upstream 2448 33022098 ~ 33029791 (+)
G77883 NA non-coding upstream 52338 32928334 ~ 32979901 (+)
LOC120563080 NA non-coding upstream 79536 32951977 ~ 32952703 (+)
G77867 NA non-coding upstream 210751 32821243 ~ 32821488 (+)
G77862 NA non-coding upstream 265731 32766271 ~ 32766508 (+)
G77897 NA non-coding downstream 2343 33051480 ~ 33052859 (+)
G77895 NA non-coding downstream 48491 33097628 ~ 33099548 (+)
G77899 NA non-coding downstream 52766 33101903 ~ 33105633 (+)
G77900 NA non-coding downstream 57072 33106209 ~ 33106571 (+)
G77903 NA non-coding downstream 62289 33111426 ~ 33112065 (+)
LOC120561717 NA other upstream 610767 32405133 ~ 32421472 (+)
G77682 tbx20 other upstream 1052330 31976318 ~ 31979909 (+)
G77447 NA other upstream 1896093 31134829 ~ 31136146 (+)
rab5ab rab5a,LOC104947906,LOC103388351,LOC105936747,LOC100704868,LOC101078239,LOC104931780 other upstream 2300630 30687338 ~ 30731609 (+)
LOC120562443 NA other upstream 2671651 30351495 ~ 30360588 (+)
G77888 NA other downstream 51276 33100413 ~ 33101534 (+)
bmper bmper other downstream 776950 33826087 ~ 33879132 (+)
LOC120562157 NA other downstream 845223 33894360 ~ 33904285 (+)
sh3bp5b sh3bp5,LOC102783023 other downstream 941405 33990542 ~ 34042648 (+)
G78200 NA other downstream 1480218 34529355 ~ 34544379 (+)

Expression


Co-expression Network