pou3f2b (pou3f2,LOC102224898,LOC107378829)


Basic Information

Item Value
gene id pou3f2b
gene name pou3f2,LOC102224898,LOC107378829
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 2592145 ~ 2594122 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805159.1
ACTGCTGATCCCGGTGCTCCGTCTCCCCATGCTGCACTCCGGCTCTCCGCTTCCGCGGCAGCCTCAACTCGCACCTCCAACAAAGAGAGTAGTGTTTGGAGAGACTTCCCCGCAGCCAATCACTGCGTCGTTGCCATTGGTTACCACGTCCATCATCCTTTGGCGTCCAATAAGCGGCGGAGGCGTGGCGGAGTCCAGGTGCGCCTCTGCGTCCACTTGGCAGAGCGCCTGAGAGCCGCCTGTGGGCAGGAGAGGATCTGTCAAATGCGAGCTTCCTTTAATCAGAGCGACCAGTCCGGCTCCGAGAGTCATGGCGACCGCAGCGTCTAACCACTACAACATCCTCACCTCCAGCGCATCCATCGTGCACTCGGAGCCCGGCAGCATGCAGCAAGCCACAGCGTACCGGGACGCGCAAAGCCTGTTGCAGGGCGACTACCCGCTGCAGAGCAACAGCCACACGCTCAGCCACGCACACCAGTGGATCACGGCGCTGTCCCACGGAGAGGGAGCCCCGTGGTCCTCCAGCCCGCTCGGCGCGGAGCAGGACATCAAACCCGCGGTGCAGGGCGCCAGGGACGAGATGCACAACTCCAGCAGCAACCTTCAGCACCAGTCGCGGCCCCACCTGGTGCACCAGACGCACGGGAACCACCACGACGGCCGGGCGTGGAGAACCACCACCGCGGCGCACATACCGAGCATGGCCACTACGAACGGCCAAAGCCTTATCTACTCCCAGCCGGGCTTCGGCGTCAACGGGCTGATCCCGGGCAGCGGGCAGGGGATGCACCACCACAACCTAAGAGACAGCCACGACGAGCACCACAGCCCGCACCTCAGCGATCACGGCCACCCTCCGTCCCAGCATCAGCACCAGCACCGGCCGCAGAGCCACCACGACCACTCGGACGAGGATACGCCGACCTCGGACGACCTGGAGCAGTTCGCCAAGCAGTTCAAGCAGCGGAGGATCAAGCTGGGCTTCACGCAGGCGGACGTGGGACTCGCCCTGGGGACCCTGTACGGAAATGTGTTTTCCCAGACCACCATATGCAGGTTTGAGGCCCTGCAGCTCAGCTTCAAAAACATGTGCAAGCTGAAGCCTCTGTTGAACAAGTGGTTGGAGGAGGCGGACTCCACCTCGGGAAGCCCGACCAGCCTGGACAAAATCGCGGCGCAggggaggaaaaggaaaaaacggACTTCAATCGAGGTAAGCGTAAAGGGAGCTTTGGAGAGCCATTTTTTGAAGTGTCCTAAACCGGCAGCGTCGGAAATAATCGGCCTGGCGGACAGTCTGCACCTGGAGAAAGAAGTGGTCAGGGTTTGGTTTTGTAAcaggagacagaaggagaaacGCATGACCCCTCCCGGAGGAGCTCTGCCGGGGAGCGAGGATGTGTACGGGGACACGCCGCCGCACCACGGGGTCCAGACCCCGGTCCAATGAACTCTGCCGGAGCGCTCCTCCAGGACAtgtttctccttttttatttatcccCAAGGTTATATATAAATCACTGAACTATGAAACGCTATAGTGGGTGTTTTATGTATAATAGATTGCAGTGAGTACTCACACAATATCTGCAATGAATTTCTGAGGAATGGAAAATGAGTGAGGGGAGGACaggacattttggttttcctctCCCAGGCAGAGCTAAAGGAACAGAAGCCTGTGTTGTGTTCTCCGAGGATACATGGCCAGCACTGTGACTCCAGTCGACGCAGTTTCAAGGTGTAGCCCCTATTGTGTATTGAAATATActtgaaaaagaagaagagagaagggTCGGGAGGAGGGATACCTGGTTTTAGACACAAAAAAAGCATAGTTGAATGGTTTTCCATTCGGCACTTTTATATCAAATCACATCTTCCTGTGCGTAAAAGGGAAAGCAAATACAAAGGCGTTTAGTTTTGTAGCCCTAAATTGTGCGTCCAGCAGTGATGGGTGGGTGGTGCAGGGGAG

Function

symbol description
pou3f2 Enables identical protein binding activity and sequence-specific double-stranded DNA binding activity. Acts upstream of or within positive regulation of cell population proliferation. Located in nucleoplasm.

NR:

description
PREDICTED: POU domain, class 3, transcription factor 2

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K09365 POU3F, OTF; POU domain transcription factor, class 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805159.1 True 1978 mRNA 0.57 1 2592145 2594122

Neighbor

gene id symbol gene type direction distance location
LOC120561851 LOC103355401,LOC106950884 coding upstream 2451 2318631 ~ 2589694 (+)
klhl32 klhl32,LOC102778901 coding upstream 298104 2227547 ~ 2294041 (+)
LOC120562914 slc25a32 coding upstream 390382 2193767 ~ 2201763 (+)
dpys dpys,LOC102775832 coding upstream 619853 1948125 ~ 1972292 (+)
si:dkey-122a22.2 LOC104926269,LOC103355395,LOC104957072,LOC101469977,LOC102309397 coding upstream 867491 1686757 ~ 1724654 (+)
tstd3 NA coding downstream 229239 2823361 ~ 2828325 (+)
zgc:172323 LOC104953825,LOC100700401,LOC102293068,LOC102783698,LOC101479285,LOC103354301 coding downstream 234705 2828827 ~ 2834341 (+)
prdm13 prdm13,LOC102783984 coding downstream 246083 2840205 ~ 2846946 (+)
prss35 prss35,LOC104949834 coding downstream 568894 3163016 ~ 3169174 (+)
tent5aa LOC104929946,LOC103354291,LOC100698511,LOC103388593 coding downstream 905065 3499187 ~ 3503888 (+)
G69983 dcaf13 non-coding upstream 401567 2189150 ~ 2190578 (+)
G69972 NA non-coding upstream 473116 2118622 ~ 2119029 (+)
G69970 NA non-coding upstream 477451 2114207 ~ 2114694 (+)
G69963 NA non-coding upstream 510723 2080315 ~ 2081422 (+)
G69962 NA non-coding upstream 531886 2059167 ~ 2060259 (+)
G70043 NA non-coding downstream 14079 2608201 ~ 2608670 (+)
G70045 NA non-coding downstream 16219 2610341 ~ 2611866 (+)
G70052 NA non-coding downstream 49765 2643887 ~ 2644171 (+)
G70109 NA non-coding downstream 98988 2693110 ~ 2694446 (+)
G70117 pnisr non-coding downstream 124210 2718332 ~ 2719757 (+)
iqcg NA other upstream 1283344 1298452 ~ 1308801 (+)
G69701 NA other upstream 1526858 1057234 ~ 1065287 (+)
LOC120561945 znf706,LOC107103982,LOC102223041,LOC103478835 other upstream 2400448 184854 ~ 191697 (+)
G70115 NA other downstream 119315 2713437 ~ 2715401 (+)
ube3d ube3d,LOC102787972 other downstream 738846 3332968 ~ 3367934 (+)
ibtk ibtk,LOC102788528 other downstream 847384 3441506 ~ 3475311 (+)
G70338 NA other downstream 939762 3533884 ~ 3535062 (+)
LOC120561848 NA other downstream 1031816 3625938 ~ 3627681 (+)

Expression


Co-expression Network