LOC120561861


Basic Information

Item Value
gene id LOC120561861
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 24998012 ~ 25000683 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805172.1
ACTCAAAGTTTCTATAAAAAACGAGGTATTGTAGTTATTGTTTAAACCCACAGTGGAGTCAGCCATGAGAGACATTGCTATGAAACCCTACTGGAGGAGTCTTTACTGTGTGTTGCTGGTGGCGCTGATCGGTGCTCCAGGTTTGGAGGCCTGGGAGCAGATTTCCTGGACCGGTGAGTTGACAGCTGGTTTTAGTAccactttcacctgttcctcTTCTTGCCACCCAAACTGCATCTACACCTGGTCTTTTGAGGGCCATACTGTCAACGGGAGCACATTAACCTGGACACCAGATGGACTGGACAAAACAGTGGAATTAAAGTGCAATGTGCTCAATCCAGAAACAGGAGTCGCCAGCAGTATGACCTCCATTGTACAAATTAAGAATCGAGTGTCTGTGCAACtcagtccaccaaacactgtcCCATCTCTCAATCAGACCCTGGATGTGGTCTGCCATGGTGCTCCATCAGGTGACCACTCCGGACCATCACGCCAGGTGAACCAGGTGGTCTGGtacaaaaatggacaaaaagtGACTCTTCGTGAAAATATGCAGCTGCTGCAAAACAACCTCACACTTCACTTTGACTCGACACTGCCTTCTGATGCTGGATTCTACCTGTGTAAGACTTATGAACCTATGGTTCAAGAGACAAGAGTTTTCAGCCTGGGCTATCTACTCAGCTTTGATCCATGGAACGTCAGCATCGACGGACCAGACACCGTGTTTCCTGGCAGACTGAGTAAATTCACCTGCTTGACGAGCTGTACCTTAAATGTGGACTGTACTGTCAGATGGCAGTTCAGGCAGGGTTTCCCCATTGGAAGCTACTTTTCAGTCTATGAAAATGAGCTCAAGTGGACACCTTCTATACCAGGTACTTTCCAAAACCTCACCTGTGTTGCCGAAAATGCAGCTGTTGGACGCTCTGCTGAGGCCACCAAGATGGTAGAAGTTAGAGGTATTCCTCTCTCTGGATCAGAGGCGGTGCAGCTCAGTGGACTTCTTGCAATGATCGTCGGCCTGGGACTGCTGGTGCTATTTGAGTCATAGGACTGtttactttttctatttttttttaccgtttATGCTTTAATGAGTATATTTGCCCTTTTTGAAATGTAATTCTTTGCTTTTAATCTTGTTCATAAAAACCTTTTCATGTTTGTACAATTATTCACCAATTTTAATAGaccaatttaatttattaattattgtgTACCATAAAATCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805172.1 True 1241 mRNA 0.45 5 24998012 25000683

Neighbor

gene id symbol gene type direction distance location
znf574 LOC103362705 coding upstream 206456 24771509 ~ 24791556 (+)
gsk3ab gsk3a,LOC103362704 coding upstream 230576 24737531 ~ 24767436 (+)
cicb cic,LOC102793300 coding upstream 268024 24689300 ~ 24729988 (+)
erfl3 erf,LOC103362700 coding upstream 320715 24621700 ~ 24677297 (+)
pou2f2a pou2f2 coding upstream 399305 24560065 ~ 24598707 (+)
LOC120561860 NA coding downstream 5092 25005775 ~ 25010474 (+)
LOC120561856 NA coding downstream 10211 25010894 ~ 25021414 (+)
si:dkey-250k15.4 NA coding downstream 26757 25027440 ~ 25034820 (+)
cxcr3.2 LOC103363349,LOC108235357 coding downstream 49435 25050118 ~ 25056981 (+)
LOC120562096 NA coding downstream 55261 25055944 ~ 25059978 (+)
G75804 NA non-coding upstream 60794 24874004 ~ 24937218 (+)
G75803 NA non-coding upstream 173247 24823026 ~ 24824765 (+)
G75798 NA non-coding upstream 193159 24800241 ~ 24804853 (+)
LOC120562289 NA non-coding upstream 509170 24468834 ~ 24488842 (+)
G75622 flot1,LOC108235422 non-coding upstream 701289 24295838 ~ 24296723 (+)
G75941 NA non-coding downstream 114873 25115556 ~ 25115757 (+)
G75942 NA non-coding downstream 143375 25144058 ~ 25144274 (+)
G75943 NA non-coding downstream 143896 25144579 ~ 25144804 (+)
LOC120561670 NA non-coding downstream 334333 25335016 ~ 25335958 (+)
G75977 NA non-coding downstream 345580 25346263 ~ 25347216 (+)
LOC120561858 NA other upstream 1703 24915254 ~ 24996309 (+)
grik5 grik5 other upstream 112639 24806289 ~ 24885373 (+)
dedd1 dedd2 other upstream 463736 24520735 ~ 24534276 (+)
G75644 NA other upstream 561193 24435139 ~ 24436819 (+)
lpcat3 lpcat3 other upstream 924314 24056437 ~ 24073698 (+)
LOC120561674 LOC104943405,LOC103477911,LOC108235491,LOC108235490,LOC102233864,LOC107379681 other downstream 373524 25374207 ~ 25380798 (+)
apoc1 NA other downstream 491101 25491784 ~ 25493262 (+)
apoc2 NA other downstream 501917 25502600 ~ 25504052 (+)
taf12 taf12 other downstream 792135 25792818 ~ 25795519 (+)
G76192 NA other downstream 1139218 26139901 ~ 26142627 (+)

Expression


Co-expression Network