tmem116


Basic Information

Item Value
gene id tmem116
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 37404963 ~ 37424820 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805212.1
CACATGGCAACAAGTGCAGTGAAGATGAAGTGTGTTGTGTGGGCGGAGTCAGTGGGAATAAGTCCGgcctcctgtctgtcagctgcagGATAAAAACCTCCCTGCTGGGGGGGTTTATCTGACAGTCTCAGCTccaggctacacacacacacacacaacacatacacacacaccttcatctTCATCTCCGCTTTAAATCAGGGAGAGTTTTCAGCATGTGGGCTGCAGAGAGTCTGCCCGAGGTCTTCCCCAACAGCTCGGAGAAAAACACCACCGGAGCCAAGGACTGGACCGAGGTGTATGAAGCCGTCAGGTGGATCCAGCTCGCCATGGCTCTGCTCAGTGTTCTGGGTTCAGGCTCCATCATCGTCTGTGTGATGTCACAGAGACTCGGCCGGACGCCAGAGctgcagccgctgctgctgctcagcgtGTCTGACCTGCTGCTCGCCTTCTGCTGGCTCATCGGAGGGGCGCTCTTCTCTCAGCGCTGCACACACTGTTACAACCTGCACACTGTGgagcagATTCTGTACATGGCGTCCTTCTTCTTCACCCTGAACTACATGTGGAACCTCTACACGGGAATCCGAGAGAAGTACTACAGCTGCATGGATGGATACGTGCAGATTTCCAACAGAGTGAGCACCGCCGGCAAAATCACCGCGCTGCTCTCAGGTCTGATTCCTGTGATGCTGATGACGCCCGTGTTTATACAAGGAAACATCAGCCAATGTCAGGCCAACTTCAGCGAGCCCTACAGGTGTCTGCTGATGCACACCGGAGAGCTGTATCTTACCTCGAAGCACCAGCACCTAATCAGAGCCTGCGGCGTGCTGCACACCTACAGCATCGCCGTCTTCCTCGCCACCTTCCTGCTCACGCTGCTCAGCATCATAGTGCTCGTGGTTAAAGCCCGTGAGATTTACAGGCGAGTCGTGACGTCGACCGGTTACCTGGGCAACGAGCAGCGGGCCTCCTTCCGTGTGATGGACCGGCGGATGCTCCTGTACCCGCTGATCTTCTTCTGCTGTTGGGGTCCAGCTGTGGCGCTGGCATTTCTGCGGGTGGCGACACCCTCCGCAGGTCACGGCTGGGCAGGGGTCGTCCTCTACATATCTCAGGCTTGCACCTCGGCCTCTCAGGGTTTCCTCAACTGTCTGGTGTACGGATGGACCCGTGCACGTCTCCGGCGAGCCGGCAGGAATGTTTTATCTCGAGACATGGACACTCAGACGCCTCTGCTGAGATCCCAGAAGATCATACGCTACCAAGCACTGCGCTCCTTCTGAAAAAGACAGATGAGGAGTGGCACGCTGGAACTGAAAGTGAAACTGAGCAGGTGCTTCTACTGTCATCTGCAGCAAAAGACTCGAGAGGAAAAGTCTCAAATTTCACTTTCCGTGAGGGGGAAACCCCGCGGCTGAGTGTCTGCTGAGGACCAACACTTCCACCTCTGATCCTGAACCGCCGAGGCAAGAaagagagaagcagaaacagccaGGGGGGAGTTTACGCTGAGAGAAACAGCGATAACGAAAACAGGATTTGAAAGAGACGTTCGTGCATTGACTCTGAACTGACATAACCTCACATGTGGTTGGTTTTAACGTTATTATATGGGTCAAATCTGTCTATAAGTGTAGATATACATGTGAAATATTATTGTTACCAATGAGTGTCAACATGATCATAATAGgaggtttaaaaatgtaaacctgTCGACTAATTTTTACTTCTTTCGTCTGTAAACCAACAGaacaaaaacatattcaaatatAATAAGTTTTAGCCTGTAAACAAACATATTCAGTCATTTTTTACAGTTCACATGCATCAGAGAAAGAAGATTGAAAGCCCCTTTAATCTTTTCATATCCACATTAAGATGAAAAGTGCTTTGAATACATGAATATATGTGGCAAAACA

Function

NR:

description
PREDICTED: transmembrane protein 116

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805212.1 True 1928 mRNA 0.51 11 37404963 37424820

Neighbor

gene id symbol gene type direction distance location
LOC120561882 NA coding upstream 12971 37387117 ~ 37391992 (+)
LOC120562463 NA coding upstream 27179 37362224 ~ 37377784 (+)
LOC120561883 NA coding upstream 45338 37354983 ~ 37359625 (+)
LOC120561884 NA coding upstream 53392 37336071 ~ 37351571 (+)
LOC120562694 NA coding upstream 78525 37324901 ~ 37326438 (+)
LOC120561682 NA coding downstream 140936 37565756 ~ 37568029 (+)
LOC120562860 NA coding downstream 152659 37577479 ~ 37578431 (+)
LOC120562465 NA coding downstream 153777 37578597 ~ 37579855 (+)
LOC120561715 NA coding downstream 158303 37583123 ~ 37586138 (+)
LOC120562469 NA coding downstream 281285 37706105 ~ 37709961 (+)
G78961 NA non-coding upstream 25649 37295566 ~ 37379314 (+)
G78947 NA non-coding upstream 198715 37201191 ~ 37206248 (+)
G78925 NA non-coding upstream 315549 37041691 ~ 37089414 (+)
G78922 NA non-coding upstream 384495 37019204 ~ 37020468 (+)
G78921 NA non-coding upstream 394483 37009434 ~ 37010480 (+)
G78990 NA non-coding downstream 8526 37433346 ~ 37467880 (+)
G78998 NA non-coding downstream 67986 37492806 ~ 37494603 (+)
G78999 NA non-coding downstream 75070 37499890 ~ 37500110 (+)
G79004 NA non-coding downstream 101056 37525876 ~ 37530597 (+)
G79011 NA non-coding downstream 118085 37542905 ~ 37543545 (+)
G78888 NA other upstream 465009 36839222 ~ 36939954 (+)
LOC120562457 NA other upstream 700970 36685936 ~ 36703993 (+)
LOC120562456 dennd4b other upstream 734934 36580965 ~ 36670029 (+)
LOC120563181 LOC107378893,LOC103370072 other upstream 939733 36392252 ~ 36465230 (+)
G78772 NA other upstream 1053968 36258160 ~ 36350995 (+)
G78989 NA other downstream 6351 37431171 ~ 37432679 (+)
G79007 LOC103364590,LOC102314205,LOC102798195 other downstream 105870 37530690 ~ 37550602 (+)
cmtm7 cmtm7 other downstream 454096 37878916 ~ 37888006 (+)
nek11 nek11,LOC102796711 other downstream 631596 38056416 ~ 38145804 (+)
G79351 NA other downstream 745234 38170054 ~ 38324620 (+)

Expression


Co-expression Network