rcvrn2 (LOC104929791,LOC103367647,LOC104960422)



Basic Information


Item Value
gene id rcvrn2
gene name LOC104929791,LOC103367647,LOC104960422
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 23378605 ~ 23382673 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039805227.1
GAGTGTGTTTCCCCCTGCCCTCCTGATCTTACTCTTATTCCTGGTCTTACTgctgagacacacactcagttcTCCAGCCATCATCtgcccacacaacacacagGGTGTCTTTATACATCAACAGGAGAAGTCAATCCAGTGAACAAATATTTTTGAACAGGAGAAGATAAACTCAGGTGGCAAATATTTGTCAGTGAGTATTGTCAAAACTGACACATTACTAAGACACTGAGAGCATCTACCATGGGAAATTCAACCAGTAGCGCAATATCAAAGGAGATCCTGCAGGACCTGAAgctcaacaccacattcactgaaAATGAGATCTCTCAGTGGTACGAGAACTTTCAGACGCAGTGCCCAACGGGACGCATAACACCAGAAGAGTTTGAGCAGATCTACGCCCGCTTCTTCCCTGACAGCGATGCCAAGAGCTACGCACGACATGTGTTTCGCTCCTTTGACACCAACGATGATGGCACTTTGGACTTCAAGGAGTACATCATCGCACTGCACATGACCTCCACTGGGAAGACGACCCGGAAACTGGAGTGGGCCTTCTCGCTGTTTGATGTGGACAAGAACGGATACATCAACAAGACAGAAGTGACGGAGATCTGCCAGGCCATATTTAAGCTGATCCCCAAGGAGGAGCAGAGCAAGTTACCAGAGGATGAGAACACACCCGAGAAGAGAGCCAACAAGCTGTGGTCTTACTTCGAAAAGAAAGACAGCGAGCGACTGGCTGAAGGAGAGTTCATCAAAGGAGTGATTGAAAATGAGAATGCAATGCGTCTTATCCACTATGAACCAGTTAAAGAATAAAGTCATTCCTACTTCATCCCCTCTCATTAGACTCtcttaaacttttattttttctcagcCTCACATgcttcctcctgcctcctctttCATCCACTCAACCCCTCCGTGTAAATACTCTTCTCTACAGTGTCTTGGTTGCAATGAACCTTTCAGTAAGTTTTTGTTTATGTCATATTGGTTTACTATCATGTTTGTCTATTAATTTATGTGAAATAGAGGCTAAAAGAGGTAAATTATGGAATagtgtttaaaatgtatacagctAAAAATGAGATTTCTGGTGACTATTATTAATGCGATACATATATACATTCAGAATGTGTATTATAAATGTGTCCTACTGTTAACCTTTTAAAtggttcaaaaatgttttgactggAGAAATTAATGGTAATGACAAATCTAAGTATCATACCCAATTGTTAGCTCActtaagttttttttacataactgGAAATGTCTTAACAGACGTGGTAGCTCTGAAGTGTTGTACTCTATTCACTGTACAATCAATTAAATATTTTCTCATAAA

Function


NR:

description
PREDICTED: visinin

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039805227.1 True 1357 mRNA 0.41 4 23378605 23382673

Neighbor


gene id symbol gene type direction distance location
cacng8b cacng8,LOC104960431,LOC105934996,LOC106536814 coding upstream 55844 23304312 ~ 23322761 (+)
cacng7b LOC103478058,LOC106931042,LOC107100306,LOC102228764,LOC105934928,LOC102193840 coding upstream 76580 23289137 ~ 23302025 (+)
prkcg LOC100699493,LOC102194125,LOC102306909,LOC102782677,LOC101481445,LOC101164921 coding upstream 91653 23269123 ~ 23286952 (+)
LOC120562649 LOC102193556,LOC102782376,LOC102306605,LOC101481152,LOC103478060,LOC108235494 coding upstream 121941 23205948 ~ 23256664 (+)
si:dkeyp-69b9.3 LOC104960480 coding upstream 236853 23129094 ~ 23141752 (+)
isoc2 isoc2 coding downstream 10326 23392999 ~ 23395671 (+)
foxj2 NA coding downstream 13261 23395934 ~ 23401710 (+)
sbk3 sbk2,LOC100700842,LOC101487833,LOC102212418,LOC102777020 coding downstream 37674 23420347 ~ 23426645 (+)
mfap5 mfap5,LOC104934636,LOC104960418,LOC107082259,LOC105934952 coding downstream 50976 23433649 ~ 23437044 (+)
slc2a3b LOC104960409,LOC101465952,LOC102775578,LOC101063282 coding downstream 116116 23498789 ~ 23508665 (+)
G75199 LOC103372680 non-coding upstream 24430 23351145 ~ 23354175 (+)
G75197 NA non-coding upstream 27838 23346840 ~ 23350767 (+)
G75196 u2af2 non-coding upstream 35928 23339846 ~ 23342677 (+)
LOC120561704 NA non-coding upstream 45849 23331840 ~ 23332756 (+)
G75192 NA non-coding upstream 49976 23328242 ~ 23328629 (+)
G75227 NA non-coding downstream 54423 23437096 ~ 23441226 (+)
G75301 NA non-coding downstream 111540 23494213 ~ 23494477 (+)
LOC120561968 NA non-coding downstream 248743 23631416 ~ 23633834 (+)
G75427 NA non-coding downstream 500504 23883177 ~ 23884631 (+)
G75483 ptpn6 non-coding downstream 560820 23943493 ~ 23948403 (+)
LOC120562293 LOC103360151,LOC102310947,LOC102785150 other upstream 295458 23070587 ~ 23083147 (+)
cnot3a cnot3 other upstream 467085 22900089 ~ 22911520 (+)
myh14 NA other upstream 558552 22785578 ~ 22820053 (+)
LOC120562539 LOC102295960,LOC100711672,LOC102209551,LOC101487210,LOC102786116 other upstream 673189 22689070 ~ 22705416 (+)
LOC120562537 NA other upstream 710720 22660479 ~ 22667885 (+)
LOC120562612 LOC103367657,LOC105025867,LOC103136704 other downstream 108452 23491125 ~ 23494034 (+)
trpv6 LOC104929027,LOC104960406,LOC103388006,LOC107082237 other downstream 178175 23560848 ~ 23571243 (+)
casp2 casp2,LOC102795506,LOC103369458 other downstream 258882 23641555 ~ 23651496 (+)
LOC120563204 NA other downstream 385560 23768233 ~ 23813408 (+)
LOC120563047 vamp1,LOC104928996 other downstream 491236 23873909 ~ 23879415 (+)

Expression



Co-expression Network