LOC120561921 (LOC104943362,LOC103369138)


Basic Information

Item Value
gene id LOC120561921
gene name LOC104943362,LOC103369138
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 11010980 ~ 11016582 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805263.1
gtccgaacccagcCCGGATCAtcgggctcggttcgggtatccatgccttactGTGTATATACGGAACACAGGGATTTTCTACCCAGAAGATATTGTAAATAAACATTGTGATTTGGTCTATATTTAGTACATGCGTGATGTGAAACCAAAAGCCGGTTCACTCGTCTCACCCACgctgcagcctgtgtgtttaaAGGAGGGCAGGCTACAAGGTCATATGCTGGTTGGGGGAAGAAAAACGGAAAAAGAGGAGCTATTCTCACTGAGACCTGCCCCTTCACTCTCTTTCCTCCTATCCCTGAGCTCCCAGGCTCACACAGAGCACATGGCTGCATGATTTTGAAACCACCCTCCCATAGAAGGACAATCAAAGTGTCATGGTGGTGCTGGAAGCATGTGCGCCTGTGCAGCCACTCCCATGTCAAGTGCAGCAGAGACACGGAAGCAGATTATTGCATACTTCTACATTTCCTGATTCCTGCCTCCATCATGTCGCTGCTGACTCACGTGCTGGCGTGCCTGTTCGGTATGGGCTCCTGGGTGGCCATCAACGGGATGTGGGTGGAGCTGCCCCTGGTCGTACCGCAGATCCCAGAGCACTGGTATCTGCCATCGTACCTCACAGTCATTATCCAAATGGCCAACATAGGTCCTCTCTTCATCACTTTGATGCACCGCTTCCGCCCAGGGGTGCTAGATGAGCGGCCGGTCATCTACTGCATTGTAGGGTTGGGGATCGTTGCTACAGTCCTGCTGGCTTTCTTCTGGAGGCACACGGTGACAATAGGGGGCTCTTTGCACAGTGTGCCCCTGCTGGTGTTAAGCTTCCTGCTGTCTGTGGTGGACTGCACCTCCTCTGTTACCTTTCTGCCTTTCATGATGCGGATGCGTCCACAGTACCTTACCACGTACTTTGCAGGTGAAGGCCTCAGTGGTCTGGTGCCCGCACTGGTGGCTCTGATTCAAGGTGTTGGTGTAGCCCACTGTCAGAATGACACTATGGCTGATGCAGCCAACACAACAGCTGATAATACCACCATGGTTGGCAGTGGAGAGCTACAAGCCATCTACCAGCCAGCTAAATTCTCTGTCGAGGTATTCTTTATGTTCCTCAGTGCCATGATGGTTGTGTGCCTTGTAGCCTTCATCCTACTCAACCATCACCCAGCTGTGGCTCGAGAGAGAAACAACGACCTGTACTTCAGTGGTGATCTGGCCCCTGGGAAGCGAGAACAAGGTCTGTCCCTGCACACCCAGACACCAGAGCAGAGGCCTATGATCAGCCCTCTGCAAGCCGTCAGGAGGGAAGCAAGGAGCTCTTTTGGTACGGGGACGTATAGCAATCTGGAGGTGGTGTTCATCTTTGTTGTACTGGCTTGGGTCAATGCTCTGACCAATGCAGTGCTGCCCTCAGTCCAGTCCTACTCCTGTCTGCCCTACGGGAACAAGGCCTACCATCTAGCTGCCACCATGGCAGCTGTTGCTAACCCAGTGGCCTGCTTCATCGCCATGTTTGTGCCTATTAGGTCTCTCATCTTCATGGGTTTCTTGGCCATAATTGGGACTGGATTTGGAGCCTACATCATGGCCATGGCTGCTCTTAGTCCATGCCCCCTGCTGGTCCATAGTGCCTCCGGAACTGCAGTCATAGTGCTGACCTGGGTCCTGTTTGTCCTGACTCTGTCCTACGTGAAGGTGATCATTGGGGTGATTCTGAGGGATGAGGGCCACGTTTTAATGATCTAA

Function

NR:

description
PREDICTED: riboflavin transporter 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805263.1 True 1746 mRNA 0.53 5 11010980 11016582

Neighbor

gene id symbol gene type direction distance location
macf1b LOC102795676,LOC102290681,LOC101484559,LOC100704065,LOC104943360 coding upstream 8510 10961890 ~ 11002470 (+)
rspo2 rspo2 coding upstream 281859 10662478 ~ 10729121 (+)
eif3ea eif3e,LOC101480544,LOC102302331,LOC100691937 coding upstream 354184 10621192 ~ 10656796 (+)
LOC120561655 tmem74,LOC103359617 coding upstream 491989 10516857 ~ 10518991 (+)
LOC120562578 NA coding upstream 632226 10368865 ~ 10378754 (+)
LOC120562012 LOC103388795,LOC103359769 coding downstream 582532 11599114 ~ 11616059 (+)
LOC120562594 znf516 coding downstream 704534 11721116 ~ 11768925 (+)
LOC120562168 zadh2,LOC102799231 coding downstream 954295 11970877 ~ 11975946 (+)
LOC120561949 zhx2,LOC104959811 coding downstream 1410959 12427541 ~ 12455916 (+)
tbc1d31 tbc1d31 coding downstream 1449367 12465949 ~ 12476564 (+)
LOC120562885 NA non-coding upstream 258328 10748123 ~ 10752652 (+)
G71741 NA non-coding upstream 266709 10744011 ~ 10744271 (+)
G71738 NA non-coding upstream 392405 10618257 ~ 10618575 (+)
G71723 emc2 non-coding upstream 419574 10580160 ~ 10591406 (+)
G71609 NA non-coding upstream 808389 10201676 ~ 10202591 (+)
G71826 NA non-coding downstream 103337 11119919 ~ 11120208 (+)
G71835 NA non-coding downstream 146114 11162696 ~ 11163045 (+)
G71838 NA non-coding downstream 170540 11187122 ~ 11187358 (+)
LOC120562313 NA non-coding downstream 219712 11236294 ~ 11309852 (+)
G71873 NA non-coding downstream 419889 11436471 ~ 11436699 (+)
LOC120562569 LOC104943359,LOC103359623,LOC101482188,LOC107100615,LOC106961743 other upstream 49850 10785654 ~ 10961130 (+)
G71743 NA other upstream 189480 10820295 ~ 10821500 (+)
LOC120561920 LOC106676202,LOC102303534 other upstream 259131 10746008 ~ 10751849 (+)
G71610 NA other upstream 802783 10207415 ~ 10208197 (+)
trnay-gua_42 NA other upstream 2161260 8849632 ~ 8849720 (+)
depdc1b depdc1b,LOC103388656,LOC101486657 other downstream 450763 11467345 ~ 11482423 (+)
mbpb mbp,LOC104918400 other downstream 520602 11537184 ~ 11599226 (+)
G71896 LOC103388795 other downstream 582455 11599037 ~ 11616242 (+)
LOC120561922 NA other downstream 691799 11708381 ~ 11710258 (+)
LOC120563165 scx other downstream 1695020 12711602 ~ 12729226 (+)

Expression


Co-expression Network