LOC120561925


Basic Information

Item Value
gene id LOC120561925
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 12478898 ~ 12484912 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805266.1
TGAGCTTCAACCAGTAGTTCTTTCACGAATGTCAGAGACATGCATGAGACTCTCATCCACGCTTTGACGATCATGCACAGCTGAAACATGGACCTGCTTTTGGTTCTTCTAATTGTCAGATGAGATAATTCTACCTTTTAAAAAACCAAACCACTAAAAAAGACTTGCATTTAAGTCCACCATCCATGGATGACAGCAGTGCGTCAGCGCCTTTGTACTGGAGATCAAAACCCCTGGGGAAGGTGAGGCGACGGGTTCAAGACCTCCGAATCCCTTCCCCCTCTTGCTATGACTTCATAGCCAGCAGACCGGCGTTGGACCTGAGCCATAACGAGAGCGCCCGGCTGGCAGTGGACTCCCTTCTGAGCCACGGCTTAGAGGGATACCACGAGGTGTTGAACGCAGAGGGAGAAGTGGACTTTCTGTCACAGCTGGAGAAGATTTACATCCTGGAAAATGGGAGGGATGGAAATACAGGTTCTGATCCTGGTGCGTCTGATGAAAGTGCTACTGAGTTTGACAGCTTGTCTACTGGGTCCCAGTCTGCCACACAATGTCCTGCAGTGTCCACAGACAGTGATCCCATTTTGGCAGGTTTGGACCTGAGGGGGCAAAAAGATGTAAGGCAGACTGACCCTGCCCTGGATAAGCCAGATGTTGAGGTTTATTTTAAGTTTGACAACAGGGCAGCCAGCATGAAAGACCTGGTCAGAGAGTTCATCACCAAGGCtggaatggccCTGGCCATAGTGATGGACAACTTCAGTGACGTAGAGCTGCTCTGTGATCTTCTCGAGGCGAGCAGGAAGAGGAATGTGTCTGTTTATCTGCTGCTGGATCATCTTCACCTGAACCTGTTTGTGAGCATGTGGCAGGaactcaaactcaacagcaaaAACTTTCCTGTGAGTCTGTTCATCTTCCTCTTTCCACCCCCTGCCTGTCTGAGCCTTGCTGCATTCTTTTTGGtgtgtgccaaGACAGGCAGGAAGCTGACTGGTGAGATTGCTGAGAGTTTTATCATCTCTGACTGGACTGAGGTGCTGACTGGCTCATACAGTTTCTCCTGGCTGTCCTGGCAGACCCATCGTAGTCTTGCTGTTCTTGTAAAGGGCAGCGCAGTCACACCTTTCCATCAGGAATTCCTCAGGCTACATTCCAGCTCCAAACCAATCCTCGGCTTTGATACTTTTATCACAGTGCCTCACACTCTCCCTCTTTACACCACATTACATGCAGCTGAAAGCACTTACAATGATCCCAGTAAGTCAAAACCAAGCCCGACCAAAACAATATGCCCCAGGGCTCAGAAGGAAGATGGTCAAGACActcaaacaaaagcaaaaatgccaGTTTTATCCAATTCACAGAGTGCAGAATTGGAGTGTAGCAAGGGTAAGACCCAACCTCTACACAGAGCAGGCGCTGGTACACAAATGCatgaaaatcctccacaattgTGCCTAAAACCTCTTATTCAACCAGGGGCACTGCAGAGTGTATCTGTGGGAGAGCATACAATAGGAGCTGTCTGCACACAGCTTGGAGCACAAACACATGTGGAGTTTCTGGAGAAGAATCAACCCCAGATCCAGAGTCACTCAAACCCTCTCAGTCAGCCCCATGTCTCAAATGTTCAGTCTCACCACTTCATCGCCGCTACAGCTGAGAAGAATACGAGGGCTCAAGAGTCAAACCCTCTACACACTGCTTCCCCAGCACACGATCAGCACAGGATTTTCAGCTATCAATCAACTTTCAGGACTAATCTCGAGCACCCTTATGTGGGTACTGAAGGTCTTTTCTTTCACCAAAGGAATAGGAACAGATTGACAGAGCATTCTGGGATTGCTGCAGGTCTAGACACACAAAGACGACAATGGAACTACTTACTTAACTTTAAACCAAAGGCTGACTTTCTATCTGATAATCCCAAAGTCCTGTCTCCTTTCACATTACAGCAAAAACAAGCAAAGACAGACCTGTGGCTTCCTTTAACCTACCCGAGGGGACACACATCTGTGCTACAAACTCAAGTGTCCTCTCTAGGAACCAGGAGGCAAGATCACCCCCAGAGGCATCACCAACCCTCCCTCCAGTTGCACCAAGCCACAGAGGCTCCAGGTTCAAAGTCAGCATCATCAGCCCTGGGAGCTCATTTTAAACCTCAGCTCCAGTCAGACTCCAAGTTGTTCTTACCAGGTACAGGAGCCACACAACATCTACAGCCCCACTCTTCCCAGCAGGCGAGGCCCCCTCCAAGACTAATCTGGATGAGCCAGAGTCGCACTGAAAGACCCAGACCTGTGGCTCGCCACAGCTCCTTCAGCACCACCTACGGGACGGGACAGCAAACGGACGGACAGGTGGGCTGGAGGCCGTTTCATAGCAGCATGAATACATCAGCAGGGAGGAGCCAGAGCATGGCTGACAGACAATTAGCAGGCCTTAATCCAAACATAACCAAGCAATATACAGACTAAGTTGATCTTTAAAGTATATTCTACtgtttaaaacatataaaatatattttactgtttaaaaaaatatatgaaattatataaaATGAGTGTATTTTGTCTACAGAATTATGAGTTAAGACTGATGTGTGAACTATTTTTAGAGCATCAACctttgtgtgatttgtgtgtagcacttaaaaaatgttttatatttttttcttaaaaacaaaatgatttaATTTTTGCTCAGTAAATGTTTAAAAGCCTATACAATTGTGTCAAAAATGTGATAGTTTTTTAACAGAATATTCGGTTGACTTTGTCGTGTTCCTATTCAAAAGCCCTGcaaacccacacaggt

Function

GO: NA

KEGG:

id description
ko04512 ECM-receptor interaction
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805266.1 True 2823 mRNA 0.47 6 12478898 12484912

Neighbor

gene id symbol gene type direction distance location
tbc1d31 tbc1d31 coding upstream 2334 12465949 ~ 12476564 (+)
LOC120561949 zhx2,LOC104959811 coding upstream 22982 12427541 ~ 12455916 (+)
LOC120562168 zadh2,LOC102799231 coding upstream 502952 11970877 ~ 11975946 (+)
LOC120562594 znf516 coding upstream 709973 11721116 ~ 11768925 (+)
LOC120562012 LOC103388795,LOC103359769 coding upstream 862839 11599114 ~ 11616059 (+)
mrpl32 NA coding downstream 59584 12544496 ~ 12546473 (+)
zmp:0000000930 NA coding downstream 63108 12548020 ~ 12549958 (+)
sdha sdha coding downstream 71030 12555942 ~ 12567664 (+)
LOC120561578 NA coding downstream 157027 12641939 ~ 12649833 (+)
hpn hpn coding downstream 174604 12659516 ~ 12676990 (+)
LOC120561687 NA non-coding upstream 107069 12370724 ~ 12371829 (+)
G71969 NA non-coding upstream 125407 12353010 ~ 12353491 (+)
G71961 NA non-coding upstream 147936 12330068 ~ 12330962 (+)
G71959 NA non-coding upstream 202957 12273394 ~ 12275941 (+)
G71953 NA non-coding upstream 262338 12216263 ~ 12216560 (+)
G71987 NA non-coding downstream 1563 12486475 ~ 12486757 (+)
G71989 NA non-coding downstream 2725 12487637 ~ 12487865 (+)
G71995 NA non-coding downstream 17599 12502511 ~ 12633773 (+)
G72006 NA non-coding downstream 33751 12518663 ~ 12520005 (+)
G72018 NA non-coding downstream 52398 12537310 ~ 12540551 (+)
LOC120561922 NA other upstream 768640 11708381 ~ 11710258 (+)
G71896 LOC103388795 other upstream 862656 11599037 ~ 11616242 (+)
mbpb mbp,LOC104918400 other upstream 879672 11537184 ~ 11599226 (+)
depdc1b depdc1b,LOC103388656,LOC101486657 other upstream 996475 11467345 ~ 11482423 (+)
G71743 NA other upstream 1657398 10820295 ~ 10821500 (+)
LOC120563165 scx other downstream 226690 12711602 ~ 12729226 (+)
LOC120562335 NA other downstream 275905 12760817 ~ 12773439 (+)
G72204 ctnnb1,LOC103388302 other downstream 640022 13124934 ~ 13125897 (+)
hint3 hint3 other downstream 760756 13245668 ~ 13250110 (+)
prelid3a prelid3a other downstream 983299 13468211 ~ 13471516 (+)

Expression


Co-expression Network