LOC120561926


Basic Information

Item Value
gene id LOC120561926
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 12780215 ~ 12782230 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805267.1
ATGGGAAACAAGAGAAGCTCTGAGCTCATGCTCTTCCGCCTGTTTTTTGCTGCTCTTTGCCTCGAGGCATTTACCATAGGGATAACAATTTACTGTCCATCTCAGAAGTTGAACTGGACAGCAGCGAGACTGTACTGCCAGAGGAACCACATTGACTTTGTAACTTGGAAGGTAGTGCACACATCCCAGCTGGCTAAGTTTTTGGTGGGCATTAAGGTCAAACAAACCTGGATCGGTCTACTCAGAGACCCTGAAAATGCCACAGTCTGGAAGTGGATAAATGTAAAAAGTGGAACGGGGATTTCAGGAGACGACCTCTCACAGAGCAGCTACTGGGCCCATGGAGAGCCCAGCAGTAACTGTGCAGTTGTGAAAGAGGATTTAAAGTGGCACAGTGTGACGTGTTCAGATGCACATGATTTCTACTGCTCGGAAAAGGAAAACACTTACCATCACAACAATAGCCTTAACTGGCACAACGCTTCTCAGTACTGTAAGAATGAAAGTGATGGTGACCTAGCCACCATCACCATAACAAACGCTGATGAATTAACAAAACCTGGCTGGATTGGACTGTACCGAGAGGCTGGTGAGACCTGGAGCTGGATCGGACAACAGACGTCTGACTACAGAAACTGGGCCCACGGAGAGCCACTCACCGCTGACTGTGGCTCtttttatcctggaaatgtaacATGGCACAGCAGCAAGTGCTCCGACAAGCTTAGCTTTGCCTGCTACGATGACGACATGGTGGTGGTGAATGAGAACAAGACATGGGAGGGTGCCCTGATGCACTGCAGGGGCATGGGAACCCGGTGTGAGGACTCCTTGGAGCCCTGCACATACCTCTATGACCTCCTGAGCCTGAACGTCTTGTCTAACTATGTCATCGACAGGATCTACAGAGCCACGACCGATGAGGTTTGGACAGGCCTGCGCTTCCTGGGAGGGGAGTGGTGGTGGGCGGATGGAAAACAGCTGGGAGACCAGGGGATGCTGCCTGACTGTCCGTCCCAGTGGAAACACTGTGGGACCCTGTCCAAATACAACACGAAGAACTGGATCACCAGGGACTGCTCAGAAAGAAGAAACTTTGTCTGTTACAAAGTAAACGTCTAATAGTAATCTAATAGTAGCTAATAAAACAAAGTCAGAGCATGTTTAGGTTTTAGAACTTTTCAATTCTCCATTGTTAAAGCCTTGTTTTGTCTGTAGCGGTACACATTGAGCTCTCTCTGTTAGAAGGTTTTATATTCTTTAGTGATCATCTTTTGTTGAAAATAGAAGATTAGGTACTCAGATATGTATATTTCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805267.1 True 1320 mRNA 0.47 3 12780215 12782230

Neighbor

gene id symbol gene type direction distance location
gapdhs gapdhs,LOC106526031,LOC103369915 coding upstream 2489 12773881 ~ 12777726 (+)
hpn hpn coding upstream 103225 12659516 ~ 12676990 (+)
LOC120561578 NA coding upstream 130382 12641939 ~ 12649833 (+)
sdha sdha coding upstream 212551 12555942 ~ 12567664 (+)
zmp:0000000930 NA coding upstream 230257 12548020 ~ 12549958 (+)
tmem147 tmem147,LOC106605633 coding downstream 1589 12783819 ~ 12788550 (+)
LOC120562668 LOC103369917 coding downstream 20246 12802476 ~ 12807616 (+)
LOC120562667 LOC103369917,LOC102193495,LOC101464842,LOC108232169,LOC101465138,LOC102300261 coding downstream 25851 12808081 ~ 12819134 (+)
ncam3 LOC104959682 coding downstream 60531 12842761 ~ 12848460 (+)
mroh1 NA coding downstream 69528 12851758 ~ 12881403 (+)
G72117 NA non-coding upstream 1773 12778230 ~ 12778442 (+)
G72036 NA non-coding upstream 140426 12639314 ~ 12639789 (+)
G71995 NA non-coding upstream 146442 12502511 ~ 12633773 (+)
G72129 NA non-coding downstream 33907 12816137 ~ 12820820 (+)
G72134 NA non-coding downstream 44421 12826651 ~ 12883769 (+)
LOC120563130 NA non-coding downstream 66245 12848475 ~ 12851077 (+)
LOC120562936 NA non-coding downstream 114080 12896310 ~ 12945988 (+)
G72198 NA non-coding downstream 329985 13112215 ~ 13120101 (+)
LOC120562335 NA other upstream 6776 12760817 ~ 12773439 (+)
LOC120563165 scx other upstream 50989 12711602 ~ 12729226 (+)
LOC120561922 NA other upstream 1069957 11708381 ~ 11710258 (+)
G71896 LOC103388795 other upstream 1163973 11599037 ~ 11616242 (+)
mbpb mbp,LOC104918400 other upstream 1180989 11537184 ~ 11599226 (+)
G72204 ctnnb1,LOC103388302 other downstream 342704 13124934 ~ 13125897 (+)
hint3 hint3 other downstream 463438 13245668 ~ 13250110 (+)
prelid3a prelid3a other downstream 685981 13468211 ~ 13471516 (+)
LOC120562530 ext1,LOC103135121 other downstream 777530 13559760 ~ 13606245 (+)
LOC120562711 eif3h other downstream 842218 13624448 ~ 13688514 (+)

Expression


Co-expression Network