ncam3 (LOC104959682)


Basic Information

Item Value
gene id ncam3
gene name LOC104959682
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 12842761 ~ 12848460 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805269.1
TCTCCCTATCATACTCATGTTAGGTGGATAGGAAACAACAGGTGTCTGCATGTCAGTGTGATACAGAGTCTAGATATTTGAGGTTTGAGGCAGATttcttgttcattttgtaatttttattaataagtATTTGGGCATTCTGTACAGCTGTGCTGATTGGAAAACCAAAACATTTAGACTTAACAGACAAACTGCAGAGTTTTGATTTGAAGTCATACAGGATTGTCAGCCAGTGAACATGACGAACCAATCAGCTCTCATCCTAAAGATGgccttgctgctgctgctgcacggCACAGaTGCAAAGATGGACATCATTAGCAGTAAGCAAGATGTTCTGGTGGGAGAAGAGATCTTACTGTTGTGTAAAGCTGGGGGAGAGGGAGACATAACGTGGAGAAAGGATGGGGAAGAAATCGAAGAAGACAAGGTGTCAATGGTGGATGAGACTTCCTCTAAATTGGACATTAAGAACGCTACGATGAAGGATATGGGGAGATATACTTGTGCGTGTGATTTCGAAAGTGGACACCGCGATGACGTTTCGACACAGCTGTATGTTTACGAGGGTCCATCATTTGGAAGCACCACCACCTACCATGAGTTTCTAGAGGGCACAGATGGTGTGGTGCCATGCCTGGTGACTGGCCAGCCAGCGGTGGATGTTCACTGGCTCAGAGACAAAGAAGATATCTCCACTAATGTCGGAAAGCGTGTGCGTCAGCTGCCTGATAACACAGTCCTCATTGAAAAAGTGAAGAGGGAGGATGCTGGGACATATGTGTGTCAGGCCCAGATCAGAGGAAGGCCCATCTATAAGCAACTCTCCGTCTCTGTTGTCATCAATGCTCCTCCTTCTGTGCATCTGAGAGAAGAGGTGAAAAAAGTGATGGCCGGATCAGAAACCAACGTTTCCTTGCTGTGTTTGGTTGATGGTCTACCAAAACCCAACATCACCTGGACCATACCGAGGCTGTTTGACCCTTCACATCATCAGTTTAACTCAGACCGCAGCCAGTTGACTATAAAGTCTGTTGACAGGGCTGACTTCGGAGAGTACATCTGCACCGCCACCAACAAGATCGCTGAGAGCAGTGCTACCATTATGCTTCATGTTTATGAGGCCCCAGAGGTGTTTGTGTCAGCAGAGAAGCAGAACGTATCAGTGGGCgagcgtgtgtctgtgtcctgtaACGTCTCTGGCCATCCTCAGCCTGAGCTACACTGGATCAACAAGCACAATGGACGCACACTGGACTCTGCCTCTGGTCGTGTCCGTGTCGATGATGGTGCGTTGGTGATTGATGAAGTAGTGCCCTCTGATGGTGGACTGTATTCCTGCATGGCTGTCAGCACCTCTGGAAATGCATCAAGAGACGTTGCAATACACACCCAGCCCGGTCGGCCACTCTACCTGTCAGTTTCACCTGGACCAACCTCAGTCATTTTCTCCCTTAAAACCCCTCCCATCAGTGGAGGAACACCGATCACAAGTTTCGTCCTGCAGTGGAGGCAAAGTGAAGCAGAACAGTGGAAGAAGATTGCAGTCGCAGCCTCAGATCCCCTAGCTATCACCACCCTCAAGCCGTACACATTGTACACAGTACGCTTGGCTGCCCTGAATATAGTGGGAGTGGGACAGTTCTCAGACACAAATGCCGTCCAAACCCAGGGAATACAGGGTGAACCAGACAGTCCAGTTTTGTCGTCCAATAAGATGAAAATAGAGGGAAACTCTTTCTATGTCCCTCTTGAACAGTTAGATAATGGTGGATCTCCTCTGCTGCACTTCGACATACGATACAGACAGGATAAAGAGATGACTGAGTGGAAAGACACGCAGCTGTCGTCTGATGCTGACTCTGTCTCCCTTCAAGACCTGTCCTACGGCTCAGACTATAGACTGGAAGTCACAGCGGTCAACGCTAATGGTTCCTCTATCCCTGCCGTGTTCAACTTTACCATCGCAGAACAGCCTGTGAGCAGCACGCGCAGACAAAAGCGCGTGGGCTGGTCGATCATGGTGATCTTCCTGGTGGTAACGGCAAGACAAGAGGTGGAACTGGAAAGGGGCTATTAA

Function

NR:

description
neural cell adhesion molecule 1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805269.1 True 2080 mRNA 0.49 15 12842761 12848460

Neighbor

gene id symbol gene type direction distance location
LOC120562667 LOC103369917,LOC102193495,LOC101464842,LOC108232169,LOC101465138,LOC102300261 coding upstream 23627 12808081 ~ 12819134 (+)
LOC120562668 LOC103369917 coding upstream 35145 12802476 ~ 12807616 (+)
tmem147 tmem147,LOC106605633 coding upstream 54211 12783819 ~ 12788550 (+)
LOC120561926 NA coding upstream 60531 12780215 ~ 12782230 (+)
gapdhs gapdhs,LOC106526031,LOC103369915 coding upstream 65035 12773881 ~ 12777726 (+)
mroh1 NA coding downstream 3298 12851758 ~ 12881403 (+)
ulk4 ulk4,LOC104943585 coding downstream 149690 12998150 ~ 13100469 (+)
cmtm8b cmtm8 coding downstream 363119 13211579 ~ 13215355 (+)
LOC120561555 ncoa7,LOC104938018 coding downstream 390654 13239114 ~ 13243225 (+)
trmt11 trmt11 coding downstream 404237 13252697 ~ 13264092 (+)
G72129 NA non-coding upstream 21941 12816137 ~ 12820820 (+)
G72117 NA non-coding upstream 64319 12778230 ~ 12778442 (+)
G72036 NA non-coding upstream 202972 12639314 ~ 12639789 (+)
G72028 NA non-coding upstream 246102 12594584 ~ 12596659 (+)
G72018 NA non-coding upstream 302210 12537310 ~ 12540551 (+)
LOC120563130 NA non-coding downstream 15 12848475 ~ 12851077 (+)
LOC120562936 NA non-coding downstream 47850 12896310 ~ 12945988 (+)
G72198 NA non-coding downstream 263755 13112215 ~ 13120101 (+)
G72199 NA non-coding downstream 271177 13119637 ~ 13124527 (+)
G72242 NA non-coding downstream 360368 13208828 ~ 13209034 (+)
LOC120562335 NA other upstream 69322 12760817 ~ 12773439 (+)
LOC120563165 scx other upstream 113535 12711602 ~ 12729226 (+)
LOC120561922 NA other upstream 1132503 11708381 ~ 11710258 (+)
G71896 LOC103388795 other upstream 1226519 11599037 ~ 11616242 (+)
mbpb mbp,LOC104918400 other upstream 1243535 11537184 ~ 11599226 (+)
G72204 ctnnb1,LOC103388302 other downstream 276474 13124934 ~ 13125897 (+)
hint3 hint3 other downstream 397208 13245668 ~ 13250110 (+)
prelid3a prelid3a other downstream 619751 13468211 ~ 13471516 (+)
LOC120562530 ext1,LOC103135121 other downstream 711300 13559760 ~ 13606245 (+)
LOC120562711 eif3h other downstream 775988 13624448 ~ 13688514 (+)

Expression


Co-expression Network