LOC120561930


Basic Information

Item Value
gene id LOC120561930
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 14603952 ~ 14607904 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805273.1
ATGACGTTGGGTTTCTACAGTGGGACATTGTTTGTGACgctaATGAGTGTGGACCGCTACCTGGCCATCGTCCACGCTGTTGCAGCCATGCGAGCCGGGACACTTTGCTATGGAATCATAGCCAGCATCACTATCTGGGTTATATCGGTCATCATGGCAATCCCTGGGGTGATCTTTGCCTCCTTGGAGCTAGTAGATGCAGATAGCAACAGCTACGAGTGCCAGCCACTGTATCCAGAGGACTGGCAGCAGTTTTGGAAGATGCTGCGAAACTTGAACGAGAACACTGTGGGCCTTTTCGTGGGTCTCCCTATCATGATTTTCTGCTATGTGAAAATCCTTTTTGTGCTGTCCAGGTCTAGGAACTCCAAAAAGAACAAAGCTGTAAAGCTGATATTCatcatagtgtgtgtgtttgtggtgtgctGGGTCCCCTACAACGTCACAGTTTTCCTTCAGACACTGCAGCTGTTCCTGGGCAACTTAAACAACTGCAAGGCTTCAAAATATTTCCACTCTGCCATAGGCTTTGCAGAGATCATTGCACAGTCTCACTGCTGTGTAAATCCACTCATCTATGCATTCGCAGGGGAAAAGTTTAGGAAGAAACTGGGCTATGTGCTGACTAGGTACTTCTGCCAGAGCAGAGGGACTTTCAGCCACAGAGACACCACAGACACTTCCAACACACCCGTAAAATCAGATAATTAAGAATGATAAACACAACTTGCTACAAAGAtggcaaagtgtgtgtgtgtgtgtgttttctaaaAGCTGTAAAATGGTACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805273.1 True 789 mRNA 0.47 3 14603952 14607904

Neighbor

gene id symbol gene type direction distance location
LOC120561707 NA coding upstream 269 14600889 ~ 14603683 (+)
si:cabz01093077.1 NA coding upstream 9968 14590243 ~ 14593984 (+)
LOC120561614 NA coding upstream 15500 14584035 ~ 14588452 (+)
zgc:110410 LOC104941306 coding upstream 535004 14058640 ~ 14068948 (+)
LOC120562882 LOC104926221,LOC103388613,LOC103353832 coding upstream 982608 13609618 ~ 13621344 (+)
LOC120561617 NA coding downstream 4008 14611912 ~ 14619881 (+)
LOC120562066 NA coding downstream 95519 14703423 ~ 14704824 (+)
dnah5 dnah5 coding downstream 154466 14762370 ~ 14874113 (+)
trnae-cuc_16 NA coding downstream 418678 15026582 ~ 15026653 (+)
irx2a irx2,LOC102783739 coding downstream 800274 15408178 ~ 15414047 (+)
G72520 NA non-coding upstream 86055 14514667 ~ 14517897 (+)
G72466 NA non-coding upstream 440208 14163536 ~ 14163744 (+)
LOC120561831 NA non-coding upstream 516156 14086603 ~ 14087796 (+)
G72319 NA non-coding upstream 1070950 13532125 ~ 13533002 (+)
G72314 NA non-coding upstream 1120841 13475370 ~ 13483111 (+)
G72559 NA non-coding downstream 25176 14633080 ~ 14633375 (+)
G72560 NA non-coding downstream 26273 14634177 ~ 14635023 (+)
G72561 LOC103365327 non-coding downstream 29966 14637870 ~ 14640768 (+)
LOC120562067 NA non-coding downstream 36472 14644376 ~ 14645788 (+)
G72634 NA non-coding downstream 392767 15000671 ~ 15003134 (+)
G72506 NA other upstream 177772 14425794 ~ 14426180 (+)
LOC120562174 rbms3,LOC101066789,LOC103370884 other upstream 233861 14175817 ~ 14370091 (+)
cmc1 cmc1 other upstream 459656 14133584 ~ 14144296 (+)
LOC120561928 csmd3,LOC101478087,LOC108232275,LOC102799137,LOC102309299,LOC102195523 other upstream 557816 13754053 ~ 14046136 (+)
LOC120562711 eif3h other upstream 915438 13624448 ~ 13688514 (+)
LOC120561718 LOC107101581 other downstream 18574 14626478 ~ 14632721 (+)
irx4a LOC103360443,LOC102233360,LOC103478376,LOC108232226,LOC101474805,LOC102784018,LOC102295185,LOC102202030,LOC104961814,LOC103145173 other downstream 945560 15553464 ~ 15560292 (+)
G72750 LOC104952694,LOC106925895 other downstream 1410455 16018359 ~ 16072201 (+)
G73031 LOC103366415 other downstream 2841681 17449585 ~ 17452568 (+)
ubxn11 NA other downstream 2848739 17456643 ~ 17461118 (+)

Expression


Co-expression Network