LOC120561943 (LOC103364756)


Basic Information

Item Value
gene id LOC120561943
gene name LOC103364756
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 157257 ~ 178298 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805286.1
TGCTGCAGTAGCATACCCATCTCTTTAATTTACCAACTTCTCCAAACAGGATACACACCTTGCGCGTgcaagaaatgtattttttatattttgtcagCGTATGCGCACATTTTACCTGCTGACATCAAAGACATTCGAATATATTTTAGTACGCAAGGTTACATAGGATTCCATTGGTTATTTTTGACTGAGAGGTTAAATAGAGCCAGCCTCTTGCACGCCTAGTTTTCTCAGCCTCCCACACAAACTCAGCTGCACTAACTAGAAAGTCCAGTTTCTCAAGCAAGTCCTAGAAACACCAGAGAGTCCTGGAGGCACCATGGACCTCGACAGTAAacggctggtggtggtggtaccAAATGAAGGGCTGGTGCCCTCTCGGCGAGCGGTCAGCAGCGAGGATGAGGCGTGGAGGAGCTACCTGGAGAACCCACTGACCGCTGCCACTAAGGCCATGATGAGCATCAATGGAGATGAAGACAGTGCAGCGGCACTGGGACTGCTGTACGACTACTACAAGGTTCCCAGAGAGAGGAGACGGGCCTCCAGCGACGTTAAACCCACAGACCCCTCTGCTATGGGGCCTGATACCTGCGGGAGCTTGGAGATACTAGATCACCATCTTCACGCTCTCAGATCCATGCCTGTCAACCTTTCCCTAAATAACACCACTACAGAACATCAGGGCTCCAAGTATGGAGGCGGTAAAGGTGGAGGTGGGGCGGCTCCGGCTGTGGTCAAGACAGAGGGCCAGATGTCCATGGGAGTGTGTTGCTCTGGGGGATCCTACCAAGGAGAACCAGAAGATCTGATACGGATGGTTTACCAGCAAAGCCACTATGATGTGTCCCGCGCTGGGTACTTGAAAGATAAACAGAGAAGCACTCCAGACAGCACATATGAGGACGCTGTCGAAGGAGAGATGTATTACAAAAGTCCCTCCTCTGGAGTTGATGAATTCCACTGCAGCCTACCAATGGGCAGCTTCCAGTACAGTCTGGAGGCCAGCATGTCTGTGCGGCCGCGGCAGGTAGAAGGACCCATGGCTTACCTGAACCGGGGCCAGTTCTACGCTTTGACACTGTCGAAGGCCGGCTTCAGATCGTCCGTATGTCAGCCCAGAGGCAAAGTGCGGGTGAGTGGAACGACGCCGTCACACGGGCCTGATGGGGGCCCATCCAGTAATGAGCAATGCACCATGGGAGGCTCTGAGCTGCAGCGGGACAGTATTGtacagAGTGTTATCATGGTTGTCTTTGGGGAAGACAAGTGCAGAGACGAGCAGCTGAAGAATTGGAAATACTGGCACTCCCGCCAGCACACTGCCAAACAGAGAGTCCTGGACATTGCCGACTTCAAGGAGAGCTTCAGCACGATCGAGAACGTGGAAGAAATTGCCTACAACGCTGTCTCTTTCACATGGGACGTCAGCGAAGAAGCTAAGGTCTTTATCTCCGTGAACTGTCTGAGCACAGACTTCTCCTCGCAGAAGGGCGTGAAGGGGATGCCTCTGATAATCCAGATCGACACCTACAGCTACAACAGCTGCAGCAGCCGGCCGATCCACAGGGCCTTCGCTCAGATCAAGGTCTTCTGCGATAAGggCGCCGAGAGGAAGCTTCGGGATGAGGAGAAGAAGCAGCTCAGGAAGAGGATGAAAGGGAAGAATTGCAGCTCGGGACAGACGCCTCCCTTTATGAGGGCTGATAACACGCTGTTCAAAACCATGATAGACCTGGACGCCCAGCCTGTGCTCTTCATTCCTGACGTCCACTTTGGAAACCTGCAGAGAGCCGGGCAGGTGTTTGCTTTCAACACTGAAGAGGTGAATGGAGATGGtgttcTGGTGAAAAGGATGTCACGTGTTGCTGAGGAAGATGTCTGTCCCCCTCAGCCCAAGAAGTCCAAAGTGGAACTGGAAAGGAAAGTCCTGCTGTATGTGAGGAAGGAGTGTGATGAAGTGTTTGATGCCTTAATGCTGCACACCCCAACCCTAAAAGCATTGATGGAGGCAATCTCAGAGAAATATGCGGTGCCTGTTGACAAGATGGCCAAAGTTTACCAAAAAAGCAAGAAAGGGGTCCTGGTGAACATGGACGACAACATCATCCAGCACTACTCCAACGAGGACACCTTCATCCTGGCTATCGAGAGCTCTGCACAATCCTTACGTGTCACTCTGTCAGAAATCTGACGGTTGCTAGCCACAGCACTGTATCCACCACAGTCACCCTATTGATGCTTTAGCCATGCCATGGGTAGCAATTGTGAACATTTGCTGGCGGTATTAGATGGTGGCGGCACCAAAATGTGTTCCTTGAGGCCTGTGTGTGGCCTAAATACAGTAGGAGTGTCAGTTTGTTGTCCTGCATGGATCACTGGCTAAACTCCACCCCCCCCTATCACCCCCTCCCCCAGGCAACCGCCACATCCACCTCACCTGCTGCAGAACCTGTTTACTACACATCCTGCTGTGGGAGGCTTCATTTTGACAATGTATGGAAGTGTCCATATTTGTGGATCAAGCGGCGAACATGTTTGGTTAATCAGCTAGTCAAGAATTTCAGAGGTAGTGAGCCGGGAAATATCAAACTaactaaataaaatttaaataataatgaacTTGTTAATACTTGGTGCGCCAGGAAAGAGGTCTTTATCCATGTTACCACAAAGCATCCAGCCAGCTTGCTGTGCTTTGACAGGAAGAACACagcacagtatacagtatagctTTTAGATTACTTGATCAGATGTGTGGAAGGCTCTCTCTTCAAAGCAAGTCACGCAACATCTTTTGCTGTCATCTTTCTTAGTTGTcaatcttcttttctttttttttatcgatttgtcatatttttttatactgCATACTAAATGTTTCCAATCTGTGCCAGTGAAATACCAGTTATCACAGATTGGGATTACACGCTGGTGTCTCACGGTCTATAATTGCATCAGGCACCATTATGGAACACGACAGTAAGTCTCAGGATGCTGTTAAACGGTTTTGCTTCCTCTGTGCATGTGTTTATTGCTTTTCCTCTGACTGTAGAGACTGGAGTCACTAGTATTTTAAGGCATTAGTCTGAGGCTACTGCAAACCATCGCAGTTTAACCGTCTTATCGCTCACTGCCTGTGTTTACCCCTGATTCCCTGACAGCTTCAGTGGCCTTCATTTGCGTCATGCACCAGAATgtacagtctttttttttttttttaaatgagtcaaTAAATATAGTTTTATATGCA
>XM_039805287.1
GCTGCAGTAGCATACCCATCTCTTTAATTTACCAACTTCTCCAAACAGGATACACACCTTGCGCGTgcaagaaatgtattttttatattttgtcagCGTATGCGCACATTTTACCTGCTGACATCAAAGACATTCGAATATATTTTAGTACGCAAGGTTACATAGGATTCCATTGGTTATTTTTGACTGAGAGGTTAAATAGAGCCAGCCTCTTGCACGCCTAGTTTTCTCAGCCTCCCACACAAACTCAGCTGCACTAACTAGAAAGTCCAGTTTCTCAAGCAAGTCCTAGAAACACCAGAGAGTCCTGGAGGCACCATGGACCTCGACAGTAAacggctggtggtggtggtaccAAATGAAGGGCTGGTGCCCTCTCGGCGAGCGGTCAGCAGCGAGGATGAGGCGTGGAGGAGCTACCTGGAGAACCCACTGACCGCTGCCACTAAGGCCATGATGAGCATCAATGGAGATGAAGACAGTGCAGCGGCACTGGGACTGCTGTACGACTACTACAAGGTTCCCAGAGAGAGGAGACGGGCCTCCAGCGACGTTAAACCCACAGACCCCTCTGCTATGGGGCCTGATACCTGCGGGAGCTTGGAGATACTAGATCACCATCTTCACGCTCTCAGATCCATGCCTGTCAACCTTTCCCTAAATAACACCACTACAGAACATCAGGGCTCCAAGTATGGAGGCGGTAAAGGTGGAGGTGGGGCGGCTCCGGCTGTGGTCAAGACAGAGGGCCAGATGTCCATGGGAGTGTGTTGCTCTGGGGGATCCTACCAAGGAGAACCAGAAGATCTGATACGGATGGTTTACCAGCAAAGCCACTATGATGTGTCCCGCGCTGGGTACTTGAAAGATAAACAGAGAAGCACTCCAGACAGCACATATGAGGACGCTGTCGAAGGAGAGATGTATTACAAAAGTCCCTCCTCTGGAGTTGATGAATTCCACTGCAGCCTACCAATGGGCAGCTTCCAGTACAGTCTGGAGGCCAGCATGTCTGTGCGGCCGCGGCAGGTAGAAGGACCCATGGCTTACCTGAACCGGGGCCAGTTCTACGCTTTGACACTGTCGAAGGCCGGCTTCAGATCGTCCGTATGTCAGCCCAGAGGCAAAGTGCGGAGTGTTATCATGGTTGTCTTTGGGGAAGACAAGTGCAGAGACGAGCAGCTGAAGAATTGGAAATACTGGCACTCCCGCCAGCACACTGCCAAACAGAGAGTCCTGGACATTGCCGACTTCAAGGAGAGCTTCAGCACGATCGAGAACGTGGAAGAAATTGCCTACAACGCTGTCTCTTTCACATGGGACGTCAGCGAAGAAGCTAAGGTCTTTATCTCCGTGAACTGTCTGAGCACAGACTTCTCCTCGCAGAAGGGCGTGAAGGGGATGCCTCTGATAATCCAGATCGACACCTACAGCTACAACAGCTGCAGCAGCCGGCCGATCCACAGGGCCTTCGCTCAGATCAAGGTCTTCTGCGATAAGggCGCCGAGAGGAAGCTTCGGGATGAGGAGAAGAAGCAGCTCAGGAAGAGGATGAAAGGGAAGAATTGCAGCTCGGGACAGACGCCTCCCTTTATGAGGGCTGATAACACGCTGTTCAAAACCATGATAGACCTGGACGCCCAGCCTGTGCTCTTCATTCCTGACGTCCACTTTGGAAACCTGCAGAGAGCCGGGCAGGTGTTTGCTTTCAACACTGAAGAGGTGAATGGAGATGGtgttcTGGTGAAAAGGATGTCACGTGTTGCTGAGGAAGATGTCTGTCCCCCTCAGCCCAAGAAGTCCAAAGTGGAACTGGAAAGGAAAGTCCTGCTGTATGTGAGGAAGGAGTGTGATGAAGTGTTTGATGCCTTAATGCTGCACACCCCAACCCTAAAAGCATTGATGGAGGCAATCTCAGAGAAATATGCGGTGCCTGTTGACAAGATGGCCAAAGTTTACCAAAAAAGCAAGAAAGGGGTCCTGGTGAACATGGACGACAACATCATCCAGCACTACTCCAACGAGGACACCTTCATCCTGGCTATCGAGAGCTCTGCACAATCCTTACGTGTCACTCTGTCAGAAATCTGACGGTTGCTAGCCACAGCACTGTATCCACCACAGTCACCCTATTGATGCTTTAGCCATGCCATGGGTAGCAATTGTGAACATTTGCTGGCGGTATTAGATGGTGGCGGCACCAAAATGTGTTCCTTGAGGCCTGTGTGTGGCCTAAATACAGTAGGAGTGTCAGTTTGTTGTCCTGCATGGATCACTGGCTAAACTCCACCCCCCCCTATCACCCCCTCCCCCAGGCAACCGCCACATCCACCTCACCTGCTGCAGAACCTGTTTACTACACATCCTGCTGTGGGAGGCTTCATTTTGACAATGTATGGAAGTGTCCATATTTGTGGATCAAGCGGCGAACATGTTTGGTTAATCAGCTAGTCAAGAATTTCAGAGGTAGTGAGCCGGGAAATATCAAACTaactaaataaaatttaaataataatgaacTTGTTAATACTTGGTGCGCCAGGAAAGAGGTCTTTATCCATGTTACCACAAAGCATCCAGCCAGCTTGCTGTGCTTTGACAGGAAGAACACagcacagtatacagtatagctTTTAGATTACTTGATCAGATGTGTGGAAGGCTCTCTCTTCAAAGCAAGTCACGCAACATCTTTTGCTGTCATCTTTCTTAGTTGTcaatcttcttttctttttttttatcgatttgtcatatttttttatactgCATACTAAATGTTTCCAATCTGTGCCAGTGAAATACCAGTTATCACAGATTGGGATTACACGCTGGTGTCTCACGGTCTATAATTGCATCAGGCACCATTATGGAACACGACAGTAAGTCTCAGGATGCTGTTAAACGGTTTTGCTTCCTCTGTGCATGTGTTTATTGCTTTTCCTCTGACTGTAGAGACTGGAGTCACTAGTATTTTAAGGCATTAGTCTGAGGCTACTGCAAACCATCGCAGTTTAACCGTCTTATCGCTCACTGCCTGTGTTTACCCCTGATTCCCTGACAGCTTCAGTGGCCTTCATTTGCGTCATGCACCAGAATgtacagtctttttttttttttttaaatgagtcaaTAAATATAGTTTTATATGCA

Function

NR:

description
PREDICTED: grainyhead-like protein 2 homolog isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805286.1 True 3253 mRNA 0.49 15 157257 178298
XM_039805287.1 False 3150 mRNA 0.49 15 157257 178297

Neighbor

gene id symbol gene type direction distance location
trnai-aau_14 NA coding downstream 128574 28610 ~ 28683 (-)
trnar-ucg_8 NA coding downstream 128931 28254 ~ 28326 (-)
trnar-ucg_7 NA coding downstream 129940 27245 ~ 27317 (-)
trnai-aau_13 NA coding downstream 130627 26557 ~ 26630 (-)
trnar-ucg_6 NA coding downstream 130985 26200 ~ 26272 (-)
spag1b spag1,LOC102791438 coding upstream 117209 295507 ~ 321882 (-)
LOC120562122 vps13b coding upstream 166240 344538 ~ 724566 (-)
LOC120561601 kcns2,LOC102789903 coding upstream 694742 873040 ~ 876038 (-)
pop1 pop1 coding upstream 750143 928441 ~ 956261 (-)
LOC120562727 LOC103364896 coding upstream 786991 965289 ~ 976229 (-)
G69539 NA non-coding downstream 1965 155074 ~ 155292 (-)
G69532 NA non-coding downstream 97157 58628 ~ 60100 (-)
G69541 NA non-coding upstream 39530 217828 ~ 233498 (-)
G69564 NA non-coding upstream 68390 246688 ~ 246940 (-)
G69615 NA non-coding upstream 164289 342587 ~ 343038 (-)
G69650 NA non-coding upstream 626752 805050 ~ 805302 (-)
G69698 NA non-coding upstream 785198 963496 ~ 963736 (-)
osr2 osr2 other upstream 550187 728485 ~ 732756 (-)
zfpm2a zfpm2 other upstream 1546860 1725158 ~ 1861166 (-)
usp45 usp45 other upstream 2548870 2727168 ~ 2818027 (-)
G70407 NA other upstream 3450835 3629133 ~ 3629818 (-)
LOC120563202 NA other upstream 3801013 3979311 ~ 3979414 (-)

Expression


Co-expression Network