LOC120561951


Basic Information

Item Value
gene id LOC120561951
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 19942987 ~ 19945175 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805300.1
ATGGCGGAGAAAATGATAAAGATAGCAACTCCAAAAGAGCATCCCTATTCGTCCCACATCTCCAAGTTTGCAATGTTCCCATCCTTCCGCTCTCCAGATGACCCTAAAATAGGAGTCAGAGCTGCCTCCCAACCATTCCTCAACCCCCTCATCCCAAATAGTGCGCCGGACATCACTCTGCTGAGCAAAACTATAGGTGGTCCATACAGACACGAGGTCTTGGAGACAACCATGAACACCAGGAAGAAAGCTGTTATGTGGACCGGAGAACACGGCTTCTGCGATCATACAAAGCCATTGAAGGGAGATTACCAGGTTTTCTACCCAACTCCTCCAAAGACAGTGTTGCCCAACCCTAAACTTCGTGACTGGGATTTGTCGATATCTGAGCGGACAAGCAACATGCTGAAAAATTTGGAGAGGACACACTGGCTCACCTCGTACCAAATGCACCACACAGCTCCAAACCAAGGCATTGCTTCAGATGCTATAAACCAACATAGGCCAAGAGAGATCACAGCTAAGTGTAATGAGGCACCAGATCCAAACCAAATGGATCATAGTCAATCAAAGTACAGCTCTGGCTCCACAGAAGCACGGAGCACTGAGCCGTACCAGGAGGTcctacacaaacaaaaaagtgagAGCAAACGCTCTGCACATAAgagcagagggaaagaaaacTGCAAAGTCCAGTTTGATGTAAGTCCAAGGCAAGAATCCGCCTCACAGAGCAGCCAAGAGGCTAACACTGCCCCTATCGCAGGTACAGAGCGACCCCTGGACCTGTACAACCGGCCACTTTCCCAGGAAGAGATGGAGGTCAACAAGAAGAAAAGCCTGATCGAGCTGCATGTAAACGATGAACCAAGTAGTAAAATACAGTATTATAAAGCTGGAAGAAATGTATCTAGCATTAGTCAGTCATCTGTGGCCAAGGATCTGGCAGGTATTGAATCACATGTTGAGTTATCCTTAAGGGCAGCTTCAGAACAGGATAAGCTGGCAAAGGGCAGAGAGCTGCCACACAGTATTTCTAACCCCTGCATCCTGCCGAGGACTCCTGTCATGGCGGGCATTCGCCCAGTGGACAGAGTCGGGACTGTGGGTAGAGAAGGCGCAGCTCTCTGCCTCCTGGACCTTCAAAATTCATTCAGTAAGACGAAGGCCCATCGCAACTTTAACAGCTCCATCACACGTGctgctgtgaacctgagggacAATGTAGTCACAGGGAAGAAACATGACTTCTATGGGATCAACTGTTACTACCTGCATGGCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805300.1 True 1284 mRNA 0.49 5 19942987 19945175

Neighbor

gene id symbol gene type direction distance location
skap2 NA coding upstream 51008 19881877 ~ 19891979 (+)
hoxa2b LOC100534423,LOC102306217,LOC102196176,LOC102792302 coding upstream 64319 19876877 ~ 19878668 (+)
hoxa9b hoxa9,LOC104927766,LOC104949899,LOC103364041 coding upstream 72249 19869180 ~ 19870738 (+)
hoxa10b hoxa10,LOC103364043,LOC104927764,LOC100692649 coding upstream 75386 19865155 ~ 19867601 (+)
hoxa11b LOC102793196,LOC102195329,LOC104949897,LOC101079822,LOC103364044 coding upstream 81712 19859104 ~ 19861275 (+)
osbpl3b osbpl3,LOC102198167 coding downstream 2281 19947456 ~ 19976994 (+)
gsdmeb NA coding downstream 33582 19978757 ~ 19988747 (+)
si:ch211-269k10.4 NA coding downstream 143690 20088865 ~ 20093308 (+)
brd9 brd9 coding downstream 225441 20170616 ~ 20178125 (+)
zdhhc11 NA coding downstream 233409 20178584 ~ 20184495 (+)
G73836 NA non-coding upstream 122396 19820235 ~ 19820591 (+)
G73776 hdac9 non-coding upstream 303528 19634873 ~ 19639459 (+)
LOC120562701 NA non-coding upstream 317376 19614503 ~ 19625611 (+)
LOC120562732 NA non-coding upstream 486371 19453769 ~ 19456616 (+)
G73606 NA non-coding upstream 622939 19319438 ~ 19320048 (+)
G73871 NA non-coding downstream 73934 20019109 ~ 20052006 (+)
G73881 NA non-coding downstream 95696 20040871 ~ 20046380 (+)
G74067 NA non-coding downstream 369309 20314484 ~ 20318117 (+)
G74081 NA non-coding downstream 395166 20340341 ~ 20340927 (+)
G74091 NA non-coding downstream 457648 20402823 ~ 20423897 (+)
G73779 hdac9 other upstream 293476 19646975 ~ 19649511 (+)
si:ch211-254p10.2 LOC102209663,LOC101158134,LOC102295699,LOC101064473 other upstream 489704 19447167 ~ 19453283 (+)
hcst LOC104925504,LOC104961397 other upstream 750885 19190020 ~ 19192102 (+)
G73570 LOC103371659 other upstream 783992 19148613 ~ 19158995 (+)
kmt2bb kmt2b other upstream 1081029 18833245 ~ 18861958 (+)
LOC120561838 tppp other downstream 247515 20192690 ~ 20209327 (+)
si:ch211-257p13.3 kifc3,LOC102783047 other downstream 269413 20214588 ~ 20226991 (+)
gra NA other downstream 377155 20322330 ~ 20325961 (+)
glipr2l glipr2 other downstream 655148 20600323 ~ 20605165 (+)
sec61b sec61b,LOC102796100 other downstream 1062838 21008013 ~ 21011414 (+)

Expression


Co-expression Network