she (LOC101483326,LOC102307252,LOC102202678)


Basic Information

Item Value
gene id she
gene name LOC101483326,LOC102307252,LOC102202678
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 21805074 ~ 21818222 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805303.1
CAACTTTCCTCTCCATCTCATCACCTCCACAGACTAGACGCATCATCTCACGCTCCGGGAATGGGATCTTTACTGGGTTCAAAGAAAAACTTCGAGTTCTTTCGAATTTACGCTCTACAGAAGCTACTTTTCAAACTGCAGGGATAGTTGTTACTGCAGGTGCAGGGTGACAGAACGAAGAGCCATTGGCCAATGACATCCAAGACGCACGATAAGTTGTCAGGGAGTTTTAGACGCTAGAAATCAGTTGAACACCACGAAGTGAACGGCCTGAATTTCATGACTAGGAGATTCTAGTCAATTCAGACCACGGTTAGCCTACTTCAATCGAGGCGTGCGTAAAATATTTGTGCGTAAAGTTGGAGCTTTTGCGCACGCTTAAAATTTTGTTCTAGTGTGGCAGCTAATGCAAGAACGTAAAAGTCAACTTTTAAATCTGTGAGAAGTGTTTATATAATCACAGCCATGGCAAGATGGTTCAGAGATTTCCCCATCAACCTGAAGACTGGAAATGAAAGGGTCCGCTCGGCCTCTGAATCTGGTCCGCAAACTCGACACAAACCCTCGTTTTCTCGTGACAGTCTGAAAGGAAATCAGCGCAAAGATGGGGGAGTGGGGGGGTTATTGGCAGGGAGAAATAGGAAAAATTCGGCTACAGAACTGGGTCGTAACAACGCTGGTTCTGCTGGAACAGTCTGGGATAGTCTCACAACTGGAAAAGGTCGCAAGAACTCCAAGGTCGAGACTGGGGCATCAGATGAGATCCGCCAGGTCAGGACCTCTAGTTTGGCGCAAGCGTACATCAGCAGGATGATCAAAGTGGACAAACAAGACAAGACCCCCAGACTCAACGGGATAAGTGAACAGAAGCAGCCCGAGAACGAAAAGGGAAGGTCTGACATTAAAACAACGCTCATTATCCTAGAGGACTACGCAGATCCTTTTGATGCAGAGAAAACCAAGGAGCAGAGGGAGGCTGAGAGAGCAGGAGTGAATGATGGGTACATGGAGCCATATGATGCCCAGGTCATCATCACAGAGGTCCGTAGACGGGGCTCCAAAGACCTCCTGAAAGTGTGTGTTCTGCTGGACCGAGgcaagagagaggggaagggagAAGAGGGAAAACCCACTCCCCCAAACATCTATGACATACCGTATGAGGGCGGGCTGGAAGGCGACAGTGGGGGGGTGTGGATCCCTGTCACACGGCCAGAGTCTGACGTCCGTCCCGCTGGAGAGTACGAACTGCCCTGGGAGTGGAGAAAGGAGGACATTGTTAGAGCACTGTCAgCTCAGTTTGAGGCAGTGGATTGTTCTCCCATGAAAGAGAACAGTTCAACCTCTGcccgccagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcaacagcagcagcagcagcaacagcagcagcacaccCTGAGGCAGAAGAACTGGAACCATAAAATACTTGTACCATCTTCTccgtcctcctcctcgtctccCTCCTTTCCCTCCTCTCCTATTCTCAAACTCTCCCCTCTCACGCCCCCATCTCCCTCTTTCCCCACCCTCAAACTCTCACCCTCTTCTAGTCCGAACAAACTTTCCCCTCCGTCTCCTACCTCCCCCAGTGCCCCACTGGAGGTGGAGGCAGCCAAAGTGGACCCCAGCCCGCCCCTGGAGAAGCAGAGCTGGTACCATGGCAGTGTGAGTCGGCAACAGGCTGAGGCTCAGCTGCAGCGCTGCAGGGAAGCCAGCTTCCTGGTGAGAGACAGCGAATCAGGAACCAGCAAGTACTCCATTGCTCTGAAGACCAGTCAGAGTTGTGTGCACATCATTGTGGCCCAGACAAAGAATGTTAAGGGTTTGGGCTTCACACTGGATCAGAGTAGTTGCGTCTTCTCCAGCATCCCTGAGCTGGTCCATCACTACTGCACACACAGACTGCCTTTCACTGGAGCAGAGCACATACCCTGCAGCATCCctCTGATCTGTGGAGCCTCTGAGGTATGCCACATCCGCCCCTCCCGCCTCCTCCCCCTGCTCCTCTGCGCGCCCCCCGCCCCGCCCCCGCCTCTCCAGCGCGTCGCATCGCTGAGCGGTGTTCAGCACGGACAGCCAGCACCGCACGACCCAGCGCACAGCTTACCTGGCCCCGCCGAGGTATTTCTATTCTCCCCTTTTCGGGCGAAAAAGTGCGGACCGACGAAGAGACCTGAACTCACCATGCCAGGTAGAGAGTGA

Function

NR:

description
SH2 domain-containing adapter protein E isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805303.1 True 2265 mRNA 0.54 7 21805074 21818222

Neighbor

gene id symbol gene type direction distance location
c7h1orf43 LOC104934460,LOC104959162,LOC103388199 coding upstream 37221 21764475 ~ 21767853 (+)
znf687a NA coding upstream 126216 21668490 ~ 21678858 (+)
LOC120563136 LOC103361607,LOC104959159 coding upstream 137243 21661202 ~ 21667831 (+)
LOC120561789 LOC103361609,LOC102785646,LOC102208248,LOC101464829,LOC100701476,LOC103478143,LOC106937891,LOC106916277 coding upstream 146544 21639092 ~ 21658530 (+)
LOC120561791 NA coding upstream 166334 21628731 ~ 21638740 (+)
flad1 flad1,LOC102778463 coding downstream 72307 21890529 ~ 21900652 (+)
efna3b efna3,LOC105928532,LOC103478166,LOC103140801,LOC102234981 coding downstream 156970 21975192 ~ 22033267 (+)
efna1b efna1,LOC104918192 coding downstream 250784 22069006 ~ 22080302 (+)
LOC120562069 tmem107 coding downstream 289721 22107943 ~ 22110135 (+)
krtcap2 krtcap2 coding downstream 292294 22110516 ~ 22113062 (+)
LOC120562851 NA non-coding upstream 79369 21724948 ~ 21725705 (+)
G74288 NA non-coding upstream 512694 21291042 ~ 21292380 (+)
G74287 NA non-coding upstream 514760 21289553 ~ 21290314 (+)
G74286 NA non-coding upstream 515699 21289171 ~ 21289375 (+)
G74274 kiaa1429,LOC104941925 non-coding upstream 561507 21243229 ~ 21243567 (+)
G74673 NA non-coding downstream 218056 22036278 ~ 22036659 (+)
G74729 NA non-coding downstream 297394 22115616 ~ 22116026 (+)
G74732 NA non-coding downstream 301516 22119738 ~ 22121346 (+)
G74737 NA non-coding downstream 311430 22129652 ~ 22129914 (+)
G74760 NA non-coding downstream 365561 22183783 ~ 22184037 (+)
G74633 tuft1,LOC102781808 other upstream 34788 21769548 ~ 21770286 (+)
them4 LOC106592246,LOC104959154,LOC101466288,LOC107096308,LOC100702377,LOC105029233,LOC106575342 other upstream 201616 21599034 ~ 21603458 (+)
crot acbd7,crot,LOC102783617,LOC101470173 other upstream 389180 21403035 ~ 21415894 (+)
LOC120563169 NA other upstream 468409 21331412 ~ 21336665 (+)
sec61b sec61b,LOC102796100 other upstream 793660 21008013 ~ 21011414 (+)
slc50a1 slc50a1 other downstream 265447 22083669 ~ 22091963 (+)
LOC120561539 NA other downstream 314356 22132578 ~ 22136234 (+)
LOC120561537 NA other downstream 319325 22137547 ~ 22139223 (+)
snx27b snx27,LOC102196713,LOC102288812 other downstream 321558 22139780 ~ 22154684 (+)
kcnn3 kcnn3,LOC104958859,LOC106930148,LOC106962094 other downstream 379490 22197712 ~ 22248527 (+)

Expression


Co-expression Network