LOC120561986 (LOC103363344)



Basic Information


Item Value
gene id LOC120561986
gene name LOC103363344
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 25104944 ~ 25111757 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039805365.1
GTGCTCCTCTGGTCCGCAGCACACTAAGGAGACGAACTCCTTATGGTGTCAACATGAAGATTAAATCTGCCAAGAAGTCTTTGCTAAGCAAAGCAAAGAGAGGAGGGAAACAACACGATGTGGTCAGAGttaaaactgaatctgaattggAGCTGCAGGGTGGAGTAGAGGAAGTGTACACTAACAGAGGTGGTCTTAACATCCAAATCAAGGAGGAACCACATTCACAGGAGATTAGTGAGGAGCACAACATCGACTCATCAAGTTGTTTAGACACTAAGCCTGAGACTGTGGCATCCAGGTCAGATGCTCACTATCAACAGGGACCCATAAAGGAGGAGTGTGACTCTGACCCTCAGCCAGAATATGATTTTACTGAAGCTGCTGTCAAGGAGGAGTCCGAGTTGTGGGTTAAAGAAGAGCGAGACAGTTGGATTAAAGAAGAGAGAGACCGTGAGCAGGAGGCATCAGGCAACATCCAGGAAGAAAATGGAGAAGAGGTCTGCACAGAGTCATCGTCTGATGTCTATCCATGTCCTCACTGCACTGTCTCATTTACTGACTTGGACTTCTTGGAGAAACATGTCAAATGGGTCCATCAGAAACAGTATCTTGCCAAGCTGAAAAATTGCCTCTCAAGCCGCACACTTAACCTCatccctaaacacacctgcactgTCTGCAGCAGCACCTTTAAATCTAAAGTACACCTTAGGGTCCATGTACGTGAAGCCCACCCTTCTGCCCCTCCCCGCAGGCTTTACCCCTGCCCAACCTGTGCACGCAGCTTCCAGTACCTGAAGAATCTGAAGAATCACTGTCAGCGCTGGCACACCATGTCTGTAGTTACCAGAGGAGGACATCTCAGCTGCGCAGACTGTGGGAAGAGTTTCAAAGCTACGTGGGGTCAAGGGCCTCATTTGTGTCATGAACCGCATAACACAGAATCGGAGGATAAGCCGATCTGTCTGGACATTGGTGTGCAGTGTTCAGAATGTGGCAAGAAGATGGGCACACCTCAAAGCCTGGAGGATCACATGCGCACCCACACAGGTGACCGACCGTTTGTCTGCAAGGATTGTGGCAGGCGATTCGTGGAGCGCAGCGGTTGGCGGCAACACATGAAAATACACACCGGGGAGAAGACGTACAAATGTCAGGTGTGCGGGAAGGCCTTTTTAAGATCCCACCACCTCAAGTGCCACTTAACCACACACTCCGGCAAGAAGGAATATTCTTGCTCTGAATGTGGAAAGGAGTTTGGATTCAAGTCGAGTCTGGATCTCCACGTGAGAACGCACTCCAGTGAGAAACCCTTCCACTGCAATGTGTGCGGGAAGAACTTTAACACAAAGAGAAACCTGAGGGTTCACACCAAACTCCACACCAATGAAAAAGCTCACCAGTGTGGCGACTGTGGCCTGAAGATCGGAGATCTCGGGGCTTTGAAAATACATCTGCGGACACACACTGGAGAAAGGCCTTACCACTGCACAGTCTGCGGCAATAGGTTTATTCGTCTTGCACATCTGCGAAACCACCAACGCACCCACACTGGTGAGAGACCCTACAAATGTACTGAATGCGACAAGAGTTTCACTCAGTCTGGCGACCTGGTGAAGCATAAGAGGATACACTCTGGGGAAAAGCCCTTTGAATGCCCAGACTGCCACAATCGTTACACTTCGTCTGGTGATCTTGGCAAGCACAGGAGGAGTCACACCAACCTGCGTCCCTACACATGTCAAGAATGTGGGAAAAGCTTTCGCTTGTCAGGCCATTTGAAAACCCACATGTTAACTCACACGGGGGAGAAGCCATATTCCTGCCCCAACTGCCTCCGCCGGTTTGCTCGCTCTCACCATCTCTCTGGGCATGTGGCTAAATGTCGCTGAGCCTTTTAATGAGAGGACTGTAAATAGCCTTGCTGATTTTGAAGTGGTAACTATGGGAGCTGTATAGAGTGTTCtgctaccctggaaatccagagttctcgcgagagcacaatttgaatttgctcagcgagtcactcagGCATTCAGTAacaatgctcattaactatgcccttgtagccgagctgcaccaatca

Function


NR:

description
PREDICTED: zinc finger protein 2 homolog

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039805365.1 True 2089 mRNA 0.49 2 25104944 25111757

Neighbor


gene id symbol gene type direction distance location
megf8 megf8 coding upstream 1335 25082542 ~ 25103609 (+)
trim35-28 LOC102796434 coding upstream 23153 25075681 ~ 25081791 (+)
LOC120562096 NA coding upstream 44966 25055944 ~ 25059978 (+)
cxcr3.2 LOC103363349,LOC108235357 coding upstream 47963 25050118 ~ 25056981 (+)
si:dkey-250k15.4 NA coding upstream 70124 25027440 ~ 25034820 (+)
erfl1 LOC103363343,LOC103477917,LOC107083533,LOC106960039,LOC103139231 coding downstream 42533 25154290 ~ 25204206 (+)
arhgef1b arhgef1 coding downstream 96233 25207990 ~ 25258474 (+)
cd79a NA coding downstream 147034 25258791 ~ 25261903 (+)
lipeb lipe coding downstream 150261 25262018 ~ 25293270 (+)
tmem145 tmem145 coding downstream 182499 25294256 ~ 25344692 (+)
G75804 NA non-coding upstream 167726 24874004 ~ 24937218 (+)
G75803 NA non-coding upstream 280179 24823026 ~ 24824765 (+)
G75798 NA non-coding upstream 300091 24800241 ~ 24804853 (+)
LOC120562289 NA non-coding upstream 616102 24468834 ~ 24488842 (+)
G75622 flot1,LOC108235422 non-coding upstream 808221 24295838 ~ 24296723 (+)
G75941 NA non-coding downstream 3799 25115556 ~ 25115757 (+)
G75942 NA non-coding downstream 32301 25144058 ~ 25144274 (+)
G75943 NA non-coding downstream 32822 25144579 ~ 25144804 (+)
LOC120561670 NA non-coding downstream 223259 25335016 ~ 25335958 (+)
G75977 NA non-coding downstream 234506 25346263 ~ 25347216 (+)
LOC120561858 NA other upstream 108635 24915254 ~ 24996309 (+)
grik5 grik5 other upstream 219571 24806289 ~ 24885373 (+)
dedd1 dedd2 other upstream 570668 24520735 ~ 24534276 (+)
G75644 NA other upstream 668125 24435139 ~ 24436819 (+)
lpcat3 lpcat3 other upstream 1031246 24056437 ~ 24073698 (+)
LOC120561674 LOC104943405,LOC103477911,LOC108235491,LOC108235490,LOC102233864,LOC107379681 other downstream 262450 25374207 ~ 25380798 (+)
apoc1 NA other downstream 380027 25491784 ~ 25493262 (+)
apoc2 NA other downstream 390843 25502600 ~ 25504052 (+)
taf12 taf12 other downstream 681061 25792818 ~ 25795519 (+)
G76192 NA other downstream 1028144 26139901 ~ 26142627 (+)

Expression



Co-expression Network