si:dkey-256h2.1


Basic Information

Item Value
gene id si:dkey-256h2.1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 31114749 ~ 31131084 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805380.1
TCTCCAACTCAAAAGTATTGAGATGAAATTAGGAAGTACGTCAAAACGCCTTTTGAGAGAGTTGGTAGCTGTTGGACCTTTTAAACTCcgataaaagaaagaaaaagaaatgctcAGACTTGGCTTTTAAGTTCAAGGGTCACTCGCCGTGAGCAGGGACATGGCTTTGCTGCCTTCAAAGTCCTCGGTGTtgtggtttgttgttgttgttgttgtgacagCTCACAAAAGTGAAGCTGCAGGGAAAGTGAAACTGATCGAAGATGGGGCGGCCTGTGAGTCCCGAGACAACGCGATAAGCCTGAGATCCAGTAAAGACTCCTCGCCGGACGGGCCGGAGCCAGGAGACCCCGCGTCCGCGTTTACTGTCCTGACTCTGGATGGGGAGTTCTCCTACCAGCCCGGTGCTCTGCGGGGACCTCTCATCATCCACGCCTTCTCCAACAAGTCAGCGTTTCTGGAGTGCATGTGGAGCTCGGAGTCGTCCCTGACCAGCCTGCTGGAGGAGCTGCCCAACAGTACCCAGGTGCTCTTTCTGTCCCTGGACGACTCTGCGCTCAGTGATGCTCTGTGGATGAGGGACCAGCTGCAGCGGGTCGCCCACGACAGTAATAAGGAGGTTCTGTCCAGGCTGCACTTCTCTCCGGTGCCGATCTTTGCTCTGGGTAACTGGATCCCCAATGTGCTTTACTACTGGCGCTGCATGGGGCGTGGCTGTGTCTTCTCCCATGCTGTTTTCAAATCCAAGGGGTGGAACATGCCTATAATCATCAAGAGACTAGATGCCAGGTATGATTGGCTGATGACGCGCTGGGATCAGAAGTCGTATCAGCTGATCGATGCAGGTGATGGGTGTGAACCTTGGCCCAAGGTGGCGGGAGCTGTGGTCTGGGTGTCTGAGGGCAACTGCTCTTTCTTCACCAAGGTGCAGAACATGGCCAAATCCAATGCATCCGGTGTCCTTGTCTACGCTTTCCCCGGTAACCCGATCCAGGACATGAACTGTGACGGGGATGAGTGCGACACAGCGTTGGACATCCCCGCTGCCATGGTGCATCTGGAGGGTTCGGTCGCTCAGGCACTCGAGTTGGGACAGCTGGTGTATGTCTCCTTCCAACACACCCCGGCCCCAAACTTCTTCATCAGTATCGACCATCAGGGGGCGCTGGCTGAGACTGGCTGGCTTCTTTACCCGTCGTTCAGCTTCATCAACTGGCAGGCACAGTGGTTTGATTTCTATGCGGATCTGCAGACCAAACTTCAAAGTCCTGCAAAGGTTGTTTCTGTTTTTGACAAAGTCCAAATGCAGGGGGAGAAAGGAGCGGTGGCCACGGTCGACCTGCCTTTAGCCCTGTCAGCCTTCGACATGCTGGAGCTGGATGCGTCCCTGTCGTGTCCTGGCAGGAGAGACTCGTCCTGCGCTCACTGGGATCACACAGTTCAGCTGTTTGTCTGCTGTGATCCTCTCGGTTCATATTGCAACACGGAGCTGGGCCGCTGGATCACTGCCTTCCGCAGAGGTACTGGGCGCTGGCTGACGGACGTGTCCCCTCTGATCCCTCTGCTGGACAGCAACAAATGCACCCTCACCATGAAGACGGTCCCCTGGGCGATGCCGTGGATTGTCTCCCTTAACCTGAGATTCAGTGTCCGCAACCGGACAGATCACAGTGTAGAGAAGCTCCGCCCTTTCAAAGTGATGTCACTGTACAGCGGGGGAACTTTCGACAAAAACTACAACATGAGATACCAGCCAACTAAAGTCTCCGTCCCGGCATCTACCAAAAAGGTGGAGCTGTACGCCGTCATCACGGCCCACGGCTACGATGACAAACATTGCGGAGAATTTTGCATCACCTCCCACAACTTCTTGATCAACAAAGTTTTCAACAACACACTCACATTTGATTCTGCAGGAACACCTCTGGGCTGCACTCTGCGGGTGAAAGATGGCGCGGTACCAAACGAAGCCGGCACGTGGCTGTACGGGCGTGGAGGCTGGTGTGATGGACTACAGGTCGACCCCTGGAGGACCGATATCACCAAACAGCTGAACATGAGCGAATTTGAATCCAACACTGTCATCTACTTCGGCTTGTTCGAGGGAAAGGATCCTAATCCATCCAGGGACCCTGGATACATCATCATGTCTTCTTTTCTAGTCTTTTACAAATGATGCCACTCTGTAAAACTCtacatttaaatgatgatgtatattaaaggggtgatagaatgattatatagggtattttacactgttccttaaggtctcctaatggggtatgtaa

Function

NR:

description
uncharacterized protein LOC110515712

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016715 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805380.1 True 2288 mRNA 0.53 12 31114749 31131084

Neighbor

gene id symbol gene type direction distance location
sept7b LOC103370332,LOC107379178 coding upstream 30232 31065765 ~ 31084517 (+)
LOC120561533 rarb,LOC102205684,LOC101478141 coding upstream 70342 31024984 ~ 31044407 (+)
LOC120562709 NA coding upstream 106352 30988763 ~ 31008397 (+)
nr1d2a LOC103375162 coding upstream 138507 30968581 ~ 30976242 (+)
LOC120562211 ube2e1,LOC106534515,LOC101480162,LOC103357960,LOC100705406 coding upstream 149332 30951233 ~ 30965417 (+)
mios mios coding downstream 32335 31163419 ~ 31175385 (+)
LOC120561996 LOC102798925,LOC101475373 coding downstream 45705 31176789 ~ 31201260 (+)
tmem106ba tmem106b,LOC103368608 coding downstream 295675 31426759 ~ 31435057 (+)
vwde wif1 coding downstream 313704 31444788 ~ 31449451 (+)
si:dkey-30e9.6 NA coding downstream 365959 31497043 ~ 31498486 (+)
LOC120562710 NA non-coding upstream 98302 31015133 ~ 31016447 (+)
LOC120562708 NA non-coding upstream 126016 30978327 ~ 30988733 (+)
G77399 NA non-coding upstream 137668 30976741 ~ 30977081 (+)
G77260 NA non-coding upstream 712045 30398276 ~ 30402704 (+)
LOC120562235 NA non-coding upstream 896146 30216748 ~ 30218603 (+)
G77555 NA non-coding downstream 383052 31514136 ~ 31514561 (+)
G77554 NA non-coding downstream 386679 31517763 ~ 31518618 (+)
G77558 NA non-coding downstream 394099 31525183 ~ 31525583 (+)
G77591 NA non-coding downstream 479974 31611058 ~ 31611311 (+)
G77592 NA non-coding downstream 481397 31612481 ~ 31614315 (+)
rab5ab rab5a,LOC104947906,LOC103388351,LOC105936747,LOC100704868,LOC101078239,LOC104931780 other upstream 383140 30687338 ~ 30731609 (+)
LOC120562443 NA other upstream 754161 30351495 ~ 30360588 (+)
G77239 NA other upstream 990111 30123702 ~ 30124638 (+)
rgl2 LOC101463702,LOC100700084,LOC102303531,LOC102796597 other upstream 1005204 30073937 ~ 30109545 (+)
G77028 LOC104942601 other upstream 1702336 29404008 ~ 29412413 (+)
G77447 NA other downstream 3745 31134829 ~ 31136146 (+)
G77682 tbx20 other downstream 845234 31976318 ~ 31979909 (+)
LOC120561717 NA other downstream 1274049 32405133 ~ 32421472 (+)
G77888 NA other downstream 1969329 33100413 ~ 33101534 (+)
bmper bmper other downstream 2695003 33826087 ~ 33879132 (+)

Expression


Co-expression Network