sept7b (LOC103370332,LOC107379178)


Basic Information

Item Value
gene id sept7b
gene name LOC103370332,LOC107379178
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 31065765 ~ 31084517 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805386.1
GTCAGCCTTTCGGCGTAGGTTCGTTGAGCACGGCAGGCGCTGCGTGACTCGTAGTGCGTAGCCCAGGCAAAAGCACTGAGAAGGGGAATGTCGGCTTGTGAATGATCGGTTTTGAGGCGGCAGGGAGCGTCAACGTTATGGCAGTACAAACAcagcaaaagAATCTGGAAGGATATGTTGGCTTTGCAAGCCTCCCCAACCAAGTGTACAGGAAGTCTGTCAAAAGGGGCTTTGAGTTCACCCTGATGGTTGTCGGTGAGTCAGGGTTGGGCAAATCCACGCTGATCAACTCTCTGTTCCTAACAGACCTGTATTCAACAGAGTATCCTGGGCCTTCACATCGAATTAAAAAGACTGTACAGGTGGAGCAGTCCAAAGTTTTAATAAAGGAAGGCGGCGTCCAGCTGCTGCTCACAATAGTCGACACCCCAGGGTTCGGAGATGCTGTCGACAACAGCAACTGCTGGCAGCCAGTCATCGACCACATAGACAGCAAGTTTGAAGACTACCTGAACTCAGAATCCCGGGTGAACAGACGACAGATGCCTGACAGCCGAATCCACTGTTGCCTGTACTTCATTGCCCCCTCGGGACATGGACTGAAACCCTTGGACATTGAGTTCATGAAGCGGTTGCATGAGAAAGTCAATGTCATCCCGCTGATCGCCAAAGCAGACACCCTCACCCCAGAAGAATGCCAACAGTTCAAGAAACAGATCATGCGGGAAATCCAAGAGCATAAAATCAAGATCTACGAGTTCCCTGAGACGGATGACGAAGAAGAGAACAGGCTGGTGAAGAAGATAAAGGACAAGTTGCCGCTGGCTGTAGTAGGAAGCAACACCATCATCGAGGTGAACAGCAAGAGGGTCAGAGGGAGACAATACCCCTGGGGGGTTGCAGAAGTTGAAAACAGTGACCACTGCGACTTCACCATCCTCAGGGATATGCTCATCAGAACTCACATGCAGGACCTGAagggaaaaaaaaaaagggttaaagGTCAACTGTGCACAAAactTGACACAGTTGAAGGAATGAGTCCCCTGGCCCAGATGGAGGAGGAAAGGCGAGAGCATGTGACTAAGATGAagaagatggagatggagatggagcaGGTGTTCGAGATGAAAGTCAAGGAAAAAGTGCAGAAGCTCAAAGACTCTGAAGcagagcTTCAGCGGCGTCATGAGCAGATGAAGAAGAACCTGGAGGCTCAGCACAAGGAGCTGGAGGAGAAGAGGCGTGTGTTCGAGGAGGAGAGGGCAAACTGGGAGTCCCAGCAGCGCCTGGAGCAGCAGAAAATGGAGGCCTCCAGgactctggagaaaaacaaaaagaaaggcAAGATCTTTTAAAAGACAGTCGGCAGGACCACCCAGACTCGAGTTATTATGTTTGCCAACGTTGCCGGTCAGGACACCAGTGTGTGGCACTgacatctccccccccccccacctcctcttctctctccttctccccctCTTCTCCCTTCCTCCCACCCCTCCTTGTCTCCtgtccctgctctgtctgctcCCAGCCACTAGAGGGGGTACTGGGGGTGTTATGGGTATttgaggaggtggagggggggtCTGAACGTACGGTCAGAACCACCACCCTAGAGCCCCCTCGCTGCCTCAGTCGGGACTTGACATcaatttataaaaacataactcCATTTCAGAAAAGGCCAAACCcatattattttaattgttattattgatgttattattattatttattattattattattattattattgttattattgttgttataacTGAATActgtcccccccctccccctaccTGCTGCTCTTTTATTTCACCCCAAGGTTGCTTTTTAAATGACTGATGTGTACAGTTTTATGGAGAGcgcagacaaaataaaaatacccATGAATCATGTCCGACTGTTGTACAATCAAGTTCTGGtgaattttatttgtttacaggAGAAGTGTAACAGAATATGAACATTAACCTGATCTTCTTTTGTGTATTAAAGTAAGAAGAGGACAAGGCATTAACTAATCCTTTTTGTTTTGAGTGTAACAGAAATGTGACAGAAATGAAACGGTGTCAACAGAAAAACCTGAAACcaagaaaaacaataaaatgcaCCTTGGGCCTTTTTTTatagattgaaaaaaaaaaaaaaaaaaaaattggctaAAGCTTTTTTTCGGAAATGTAacgctttctttttcttctgtgttttaGCTATTTCAACTAGCCATGGACCACCATTTATAATGTCATAAGTGTTATATTTcactttagtttatttttttatatataccgAGCCAGCTGAAGTAATAACTTCTTTTGTATGTTGAGAAAATCCTCAGAGACTTGAGAGCAGCGTCCACTGTTGAACAGAAACACACTTCCACATGTAACAGTGATCCATGGACGCTTTAAGGAAAAACATGATTTCAGTCCCTCTGCGGTAACTGTCTGTGGGAAATAAAGAGTCAACACCGCATTTTGCTTTGGCTATGTACTCCAtctctgtatttttcatttttcatttgtattGTACAAAGTCACTTAATAAACCTGTGATGATA

Function

NR:

description
PREDICTED: septin-7 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805386.1 True 2578 mRNA 0.45 16 31065765 31084517

Neighbor

gene id symbol gene type direction distance location
LOC120561533 rarb,LOC102205684,LOC101478141 coding upstream 21358 31024984 ~ 31044407 (+)
LOC120562709 NA coding upstream 57368 30988763 ~ 31008397 (+)
nr1d2a LOC103375162 coding upstream 89523 30968581 ~ 30976242 (+)
LOC120562211 ube2e1,LOC106534515,LOC101480162,LOC103357960,LOC100705406 coding upstream 100348 30951233 ~ 30965417 (+)
LOC120562210 LOC103357958,LOC107379173,LOC102233395,LOC103388353,LOC100705137,LOC103477709,LOC106523089 coding upstream 116577 30909030 ~ 30949188 (+)
si:dkey-256h2.1 NA coding downstream 30232 31114749 ~ 31131084 (+)
mios mios coding downstream 78902 31163419 ~ 31175385 (+)
LOC120561996 LOC102798925,LOC101475373 coding downstream 92272 31176789 ~ 31201260 (+)
tmem106ba tmem106b,LOC103368608 coding downstream 342242 31426759 ~ 31435057 (+)
vwde wif1 coding downstream 360271 31444788 ~ 31449451 (+)
LOC120562710 NA non-coding upstream 49318 31015133 ~ 31016447 (+)
LOC120562708 NA non-coding upstream 77032 30978327 ~ 30988733 (+)
G77399 NA non-coding upstream 88684 30976741 ~ 30977081 (+)
G77260 NA non-coding upstream 663061 30398276 ~ 30402704 (+)
LOC120562235 NA non-coding upstream 847162 30216748 ~ 30218603 (+)
G77555 NA non-coding downstream 429619 31514136 ~ 31514561 (+)
G77554 NA non-coding downstream 433246 31517763 ~ 31518618 (+)
G77558 NA non-coding downstream 440666 31525183 ~ 31525583 (+)
G77591 NA non-coding downstream 526541 31611058 ~ 31611311 (+)
G77592 NA non-coding downstream 527964 31612481 ~ 31614315 (+)
rab5ab rab5a,LOC104947906,LOC103388351,LOC105936747,LOC100704868,LOC101078239,LOC104931780 other upstream 334156 30687338 ~ 30731609 (+)
LOC120562443 NA other upstream 705177 30351495 ~ 30360588 (+)
G77239 NA other upstream 941127 30123702 ~ 30124638 (+)
rgl2 LOC101463702,LOC100700084,LOC102303531,LOC102796597 other upstream 956220 30073937 ~ 30109545 (+)
G77028 LOC104942601 other upstream 1653352 29404008 ~ 29412413 (+)
G77447 NA other downstream 50312 31134829 ~ 31136146 (+)
G77682 tbx20 other downstream 891801 31976318 ~ 31979909 (+)
LOC120561717 NA other downstream 1320616 32405133 ~ 32421472 (+)
G77888 NA other downstream 2015896 33100413 ~ 33101534 (+)
bmper bmper other downstream 2741570 33826087 ~ 33879132 (+)

Expression


Co-expression Network